hyal1 (LOC106565982)


Basic Information

Item Value
gene id hyal1
gene name LOC106565982
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79398640 ~ 79401885 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569915.2
GCCTCGTCCTCTTTTGATTGGTGCTTGGAAAATCTCTGGTTTTTCAAGATGCACTGCATTTAGTTCGCGTGGCACAAATGGTGATCCGAATTTGCACTTTGTGCAATAAAAATAACAAAGTCCGAACCCCAGGCATAGCGGACGACCTAAATCCAGCGCACCTACTTGTTTCTCCAGACCGTTTTCCTTCCTCTTTCTTACTTTGAAAAGAGAAGTTGGCTATCAGCAGATCATGCGATAGCATACACTTTTCTCTATAGTCAGTTGACTTGTATAAACCAACTATTTGCCCACGAAACCGATGATATGGGTATAAAGTGCATTTTCCCTGGGGCGCTGATTCTTTGTGTGAATGTGGCCAGTATTGTTCTTAGCAGTGAGCATGAAGCAGGAGCACTCCCCACACTGTCCCAGCTGCCCTTCCTCACTGTGTGGAATGCCCCTACAGCCCAGTGTAAGAGCCGCTATGGGGTGGATCTGGACCTGGGAGTGTTCAACATAGTGAGCAATCAGAACCAGAGCTTCATGGGTGACAACATCACCATCTTCTACAATACTAAACTGGGTCTGTACCCAAGATACAACCAAGGAGAGGCAGTTAACGGCGGGGTGCCACAGAATTCCAGCCTGCTGGAGCACCTGAGGGCTACCTCTGAGGACCTCCGGACCTACATGCCTGACAGAGACTTCCAAGGGCTGGCTGTGGTGGACTGGGAGAGCTGGAGACCACTCTGGGAGCGCAACTGGGAAGGCATGAAGGTTTACTGGGAGGGGTCCAGGGCCCTAGTGAGGTCCAAGCACCCAGACTGGAGCCCTGCTCAGGTGGAGGTGGTGGCCCGCAAGGAGTTTGAGGATGCAGCACGGGCGTTCATGGAGGGCACCCTAAGGTTGGGGGAGCAGGAGAGACCCAAGGGGATGTGGGGCTTTTATGGCTTCCCCTCCTGCTATAACTACtacaaaaacacaacatataacTACACAGGGGAGTGTCCTCAGATAGAGTTGAAGAGGAATGATGATCTGTTCTGGCTGTGGAACGTCTCCTCTGCCCTCTACCCAGATATCTACCTGGATCTTGGGATGCGTGGTCTTGGCAACGGCATCCTCCTCTACACACACCACCGTGTCATGGAAGCCATGAGAGTGGGCGCGCAGGTAACCCCCATGGTCCCCCCTGTGTTTCCGTACGCCCGCATTGTCTACACTTACTCTCTGGAGTTCCTCTCTCAGGAGGTCCTTGTCCACACGATTGGAGAGAGTGCTGCTTTAGGATCTGCAGGGATCGTACTGTGGGGAGACAATGCCTACTCCAAATCTAAGGCGAATTGTGAGGCAATCAAAGACTACCTGGATGAAACCCTGGGCCGTTACTTGGTGAATGTGACCACAGCAGCTACTCTGTGTAGCAGGACGGTGTGCTCCTCTCAGGGCCGATGCCAGAGGAAAGACAAAGTCTCCCGTGCCTACCTCCACCTGGACCCCAGTGCCTGGACTGTGGTGCCTGAGAAGAGGCCAGAGGGAGGGCAACGCTACAGGGTGCTGGGCCAACTGAAGCCACGTGAGGCTGTGTACATACAGACCCACTTCCAGTGCCAATGCTATCCTGGCTGGGGAGGTAAACACTGCTCCAAGCCCCTGTAATTCTGATCGAGACAATCCCCTTGTGTTTAAAGGAGCATCGGTTACATTACgttactctacattacattacgtTAGCCCACTCTGATTACTGTACTCACTCTTATGGGACACATTATACCCAGTCCTGAGCCAATAGAGTATAGAAGTATAACAATTATACCCAGCGTTGTTGCATTCGTGACCCTCATTCAGACTCCCCCTGCTCAACACCAATCTGCCTCTGACCACTCCAAATAGGTGGGTTACATGTTACCAGTTGGATGAGTTTACTAGTGAGGGATGAAGTGATATGATATTATGAACAGTTTATTTGTAGATCACTGAGAAAGCTAGGAATAAACCATAGTTGACATTGACATTTAAGCACATGTCTCTTTAGAAAATAGTTTCCAGACATTTTACAAAAGTAGAAATGTAATCTTGTTAAATTACAGTTTATGACCTGGGATTATTCCTATTGGTTTCAAACACGTCACAGAAAATCAGTGGTTAAGCTTGAATCcttagttgaaacaataacaaaggggTCATTCCGCCTCTGTTTCGGTAttaagctgagggatgggcctttTAGAAGTGTAACCATTCTCAAAtttatagacagagctatggatgcacggactgaccatccataaaatcaaaatgatagttttaaccatgtttttgaTGCTATACAGTGTTTACACTGTTTAccaacattggagtaaaacaacatattttgagttctgatggggtatgcgAGTTGAGCTAAGCTCACGATGCATTTAcacgttatattcttcaagaatcaatgggtatatatcattCATTAGTCCAacaatggatgtagcaactaaggattctagctttaaaatAATGCTTCATTTCGGGACTTTTAAGTTTTTAAAGCTATTAGAGCTAAGGAGATCCACACCAACTGGAGTGGTGCTTGACAGTTTCAGCTGTTAGCTAATGGCAAAGTGATTCTTGAGCACCACAAATGTACTCAGAAATGGACTAGAACCCCGTGGGCGCATATGTGACTCATTAGAAATGTGATGTAATGTACTCATGATTGATACTGTATGGATGAATGTATTGTCTACCAGATACTTCAACTGAAATGTTTTTGAATTTTACATTCAATAAATGATTTCACTGG
>XM_021569916.2
GCCTCGTCCTCTTTTGATTGGTGCTTGGAAAATCTCTGGTTTTTCAAGATGCACTGCATTTAGTTCGCGTGGCACAAATGGTGATCCGAATTTGCACTTTGTGCAATAAAAATAACAAAGTCCGAACCCCAGGCATAGCGGACGACCTAAATCCAGCGCACCTACTTGTTTCTCCAGACCGTTTTCCTTCCTCTTTCTTACTTTGAAAAGAGAAGTTGGCTATCAGCAGATCATGCGATAGCATACACTTTTCTCTATAGTCAGTTGACTTGTATAAACCAACTATTTGCCCACGAAACCGATGATATGGGTATAAAGTGCATTTTCCCTGGGGCGCTGATTCTTTGTGTGAATGTGGCCAGTATTGTTCTTAGCAGTGAGCATGAAGCAGGAGCACTCCCCACACTGTCCCAGCTGCCCTTCCTCACTGTGTGGAATGCCCCTACAGCCCAGTGTAAGAGCCGCTATGGGGTGGATCTGGACCTGGGAGTGTTCAACATAGTGAGCAATCAGAACCAGAGCTTCATGGGTGACAACATCACCATCTTCTACAATACTAAACTGGGTCTGTACCCAAGATACAACCAAGGAGAGGCAGTTAACGGCGGGGTGCCACAGAATTCCAGCCTGCTGGAGCACCTGAGGGCTACCTCTGAGGACCTCCGGACCTACATGCCTGACAGAGACTTCCAAGGGCTGGCTGTGGTGGACTGGGAGAGCTGGAGACCACTCTGGGAGCGCAACTGGGAAGGCATGAAGGTTTACTGGGAGGGGTCCAGGGCCCTAGTGAGGTCCAAGCACCCAGACTGGAGCCCTGCTCAGGTGGAGGTGGTGGCCCGCAAGGAGTTTGAGGATGCAGCACGGGCGTTCATGGAGGGCACCCTAAGGTTGGGGGAGCAGGAGAGACCCAAGGGGATGTGGGGCTTTTATGGCTTCCCCTCCTGCTATAACTACtacaaaaacacaacatataacTACACAGGGGAGTGTCCTCAGATAGAGTTGAAGAGGAATGATGATCTGTTCTGGCTGTGGAACGTCTCCTCTGCCCTCTACCCAGATATCTACCTGGATCTTGGGATGCGTGGTCTTGGCAACGGCATCCTCCTCTACACACACCACCGTGTCATGGAAGCCATGAGAGTGGGCGCGCAGGAGGTCCTTGTCCACACGATTGGAGAGAGTGCTGCTTTAGGATCTGCAGGGATCGTACTGTGGGGAGACAATGCCTACTCCAAATCTAAGGCGAATTGTGAGGCAATCAAAGACTACCTGGATGAAACCCTGGGCCGTTACTTGGTGAATGTGACCACAGCAGCTACTCTGTGTAGCAGGACGGTGTGCTCCTCTCAGGGCCGATGCCAGAGGAAAGACAAAGTCTCCCGTGCCTACCTCCACCTGGACCCCAGTGCCTGGACTGTGGTGCCTGAGAAGAGGCCAGAGGGAGGGCAACGCTACAGGGTGCTGGGCCAACTGAAGCCACGTGAGGCTGTGTACATACAGACCCACTTCCAGTGCCAATGCTATCCTGGCTGGGGAGGTAAACACTGCTCCAAGCCCCTGTAATTCTGATCGAGACAATCCCCTTGTGTTTAAAGGAGCATCGGTTACATTACgttactctacattacattacgtTAGCCCACTCTGATTACTGTACTCACTCTTATGGGACACATTATACCCAGTCCTGAGCCAATAGAGTATAGAAGTATAACAATTATACCCAGCGTTGTTGCATTCGTGACCCTCATTCAGACTCCCCCTGCTCAACACCAATCTGCCTCTGACCACTCCAAATAGGTGGGTTACATGTTACCAGTTGGATGAGTTTACTAGTGAGGGATGAAGTGATATGATATTATGAACAGTTTATTTGTAGATCACTGAGAAAGCTAGGAATAAACCATAGTTGACATTGACATTTAAGCACATGTCTCTTTAGAAAATAGTTTCCAGACATTTTACAAAAGTAGAAATGTAATCTTGTTAAATTACAGTTTATGACCTGGGATTATTCCTATTGGTTTCAAACACGTCACAGAAAATCAGTGGTTAAGCTTGAATCcttagttgaaacaataacaaaggggTCATTCCGCCTCTGTTTCGGTAttaagctgagggatgggcctttTAGAAGTGTAACCATTCTCAAAtttatagacagagctatggatgcacggactgaccatccataaaatcaaaatgatagttttaaccatgtttttgaTGCTATACAGTGTTTACACTGTTTAccaacattggagtaaaacaacatattttgagttctgatggggtatgcgAGTTGAGCTAAGCTCACGATGCATTTAcacgttatattcttcaagaatcaatgggtatatatcattCATTAGTCCAacaatggatgtagcaactaaggattctagctttaaaatAATGCTTCATTTCGGGACTTTTAAGTTTTTAAAGCTATTAGAGCTAAGGAGATCCACACCAACTGGAGTGGTGCTTGACAGTTTCAGCTGTTAGCTAATGGCAAAGTGATTCTTGAGCACCACAAATGTACTCAGAAATGGACTAGAACCCCGTGGGCGCATATGTGACTCATTAGAAATGTGATGTAATGTACTCATGATTGATACTGTATGGATGAATGTATTGTCTACCAGATACTTCAACTGAAATGTTTTTGAATTTTACATTCAATAAATGATTTCACTGG

Function

NR:

description
hyaluronidase-1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569915.2 False 2782 mRNA 0.47 4 79398640 79401885
XM_021569916.2 True 2707 mRNA 0.46 4 79398640 79401885

Neighbor

gene id symbol gene type direction distance location
LOC110494654 LOC106565981 coding upstream 5460 79389233 ~ 79393180 (+)
tusc2 tusc2 coding upstream 11089 79382417 ~ 79387551 (+)
LOC110494653 rassf1 coding upstream 16351 79370819 ~ 79382289 (+)
nprl2 tusc4 coding upstream 32503 79359278 ~ 79366137 (+)
LOC110494652 LOC106565979 coding upstream 43131 79351772 ~ 79355509 (+)
LOC110493268 LOC106582605 coding downstream 145931 79547816 ~ 79844313 (+)
LOC110494656 LOC106566001 coding downstream 446597 79848482 ~ 79871163 (+)
LOC110494660 LOC106565999 coding downstream 472448 79874333 ~ 79882252 (+)
LOC110494661 LOC105025424 coding downstream 498133 79900018 ~ 79925378 (+)
LOC110494662 LOC106565996 coding downstream 524475 79926360 ~ 79930803 (+)
LOC118936427 LOC106582800 non-coding upstream 55214 79338634 ~ 79350582 (+)
LOC110493267 LOC106565976 non-coding upstream 75430 79321093 ~ 79336076 (+)
LOC110494644 LOC106565971 non-coding upstream 83802 79298520 ~ 79314874 (+)
G1493174 NA non-coding upstream 105390 79245955 ~ 79293250 (+)
G1493309 NA non-coding downstream 103503 79505388 ~ 79505593 (+)
G1493318 NA non-coding downstream 114897 79516782 ~ 79517163 (+)
G1493488 NA non-coding downstream 115412 79517297 ~ 79517805 (+)
G1493498 NA non-coding downstream 121139 79523024 ~ 79523296 (+)
G1493511 NA non-coding downstream 142561 79544446 ~ 79544948 (+)
G1492310 NA other upstream 622913 78770747 ~ 78775727 (+)
G1492003 NA other upstream 1145332 78252629 ~ 78253308 (+)
G1491963 NA other upstream 1208350 78189012 ~ 78190290 (+)
G1495346 NA other downstream 1891555 81293440 ~ 81293926 (+)
G1495362 NA other downstream 1935132 81337017 ~ 81338163 (+)
LOC110494696 LOC106582736 other downstream 2030326 81432188 ~ 81602161 (+)
LOC110494698 LOC106566043 other downstream 2426847 81828571 ~ 81847540 (+)
G1496351 LOC106566032 other downstream 2761321 82163138 ~ 82169750 (+)

Expression


Co-expression Network