LOC110494664 (ret7)



Basic Information


Item Value
gene id LOC110494664
gene name ret7
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 79933866 ~ 79938222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021569930.2
CACCATGGGACATCCTAGAGACTTTAAATCTCTTCATTCTAACAACTGCTGTCTATTGAAGGTTTGAGACGGCCACACAAGTATCCACCATGCCTACCGACTACACTGGCACATGGGACATGACTAGTAATGAAAACTTTGAAAGTTACATGGTTGCTCTTGGCATTGATTTTGCAACACGCAAGATTGCAAACATGTTGAAACCTCAGAAAGTGATTGAGCAAGACGGGGATTCTTTCACCATCAAAACATTCACTACCTTCAAAAACTACACAGTCTCATTCAAGATTGGGGAAGAGTTTGAGGAGGTGACCAAAGCCATGGATAACAGAAAAGTCCAGACGGTGGTCAACTGGGACAATGATAAACTGGTGTGTGTTcagaagggagagaagaagaacagAGGGTGGACACACTGGATAGAAGGAGATGAGCTCTATCTGGAAATCACCTGTGGGGATAAAGTCTGCAAGCAGATTTATAAAAGGAGTGCTTGATAATTCTTTCACCATAAAGTTTGCACAATATTTCTTCAACCTTACATTTGCTAAATATTCTTCATAAATGTATCACTAATATGACATGCTCATGGTATGTTTTGAGTATgcaaaatagttcaaataaaaTAGTCAACATTTTAACAACATGAATAAAAATAACATGATATACATTTGAGGATTTCGTGACTATGTACAATACATTTAATCTACTAAAAACCATGAATAAAGCACTGGACCATGAA

Function


NR:

description
retinol binding-protein 7

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021569930.2 True 742 mRNA 0.38 4 79933866 79938222

Neighbor


gene id symbol gene type direction distance location
cenps apitd1 coding downstream 55 79930500 ~ 79933811 (-)
LOC110494659 LOC106565998 coding downstream 42324 79884493 ~ 79891542 (-)
LOC110493269 LOC106566002 coding downstream 88125 79844410 ~ 79845741 (-)
hemk1 hemk1 coding downstream 574812 79355894 ~ 79359054 (-)
LOC110494647 glyctk coding downstream 604367 79323224 ~ 79329499 (-)
h6pd LOC106565995 coding upstream 6038 79944260 ~ 79952863 (-)
si:ch73-15b2.5 LOC106566004 coding upstream 43720 79981942 ~ 79986165 (-)
LOC110494667 LOC106565993 coding upstream 51451 79989673 ~ 79998248 (-)
LOC110494676 LOC106582761 coding upstream 109604 80047826 ~ 80089876 (-)
LOC110494673 LOC106565988 coding upstream 160225 80098447 ~ 80207107 (-)
G1493978 LOC106565997 non-coding downstream 8598 79900005 ~ 79925268 (-)
G1493962 NA non-coding downstream 71260 79861731 ~ 79862606 (-)
G1493960 NA non-coding downstream 77088 79854974 ~ 79856778 (-)
G1493959 NA non-coding downstream 79255 79854184 ~ 79854611 (-)
G1493922 NA non-coding downstream 89581 79839434 ~ 79844285 (-)
G1494022 NA non-coding upstream 34950 79973172 ~ 79973436 (-)
G1494023 NA non-coding upstream 37057 79975279 ~ 79976035 (-)
G1494024 NA non-coding upstream 38362 79976584 ~ 79977750 (-)
G1494036 NA non-coding upstream 71874 80010096 ~ 80010325 (-)
G1494041 NA non-coding upstream 79904 80018126 ~ 80018340 (-)
G1493395 LOC106582800 other downstream 584477 79348231 ~ 79349389 (-)
G1492898 NA other downstream 1118437 78771571 ~ 78815429 (-)
G1492901 NA other downstream 1119911 78803860 ~ 78813955 (-)
G1492910 NA other downstream 1152471 78778352 ~ 78781395 (-)
G1492897 NA other downstream 1161912 78770740 ~ 78771954 (-)
G1494054 NA other upstream 133417 80071639 ~ 80087637 (-)
G1494870 NA other upstream 659772 80597994 ~ 80598532 (-)
G1494924 NA other upstream 754200 80692422 ~ 80694102 (-)
G1495003 NA other upstream 956866 80895088 ~ 80895437 (-)
G1495113 NA other upstream 1127749 81065971 ~ 81066682 (-)

Expression



Co-expression Network