LOC110494670 (LOC106582756)


Basic Information

Item Value
gene id LOC110494670
gene name LOC106582756
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80554017 ~ 80581837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950740.1
AACCCCGAGTGAGTGTGTGATCGCTTGCTTTCATGCGTGAGTGTGAAAATTGCTTTCCTTCAAGTGACTTCAGATGAGAATCTCAAGCGAGAAAAAAGCAATATTTGATATGGCATAggacagaaaaaaaaaaatagattgtGAAATCATAACCAGTGCGTACTTCCTTGCGGTAGGCGGGGCATGAGGAGTACATGCGGAATTGTGCTCCAGGTGTGCGTCTTGTCCCAGGATACATACAGAAAGTTCACATGGAGTTTCTGAAATTGCTCCATACATCAACACGTGCACAGAACAGAACTGGACCGCATGTAGCCTAGTGCCACAGACAACATCAAAGACAGCCAGTGTTGTGTCTGGGAATCAAGACTTTAGTTATCTGGAGACACGGCATTATACACACTCAGCTCCTGCTGATCACCAGAATGTTCAGGAGGAGATGTTATCGTGGTTGTAGGTAACAGGCAGTAGCAGTGGAGATGGTCCCCTGGGCCAACTTCCTGGTGACATCCATATGGATACAGACGCTCAAAGCCTCAGGGCTGGACACCTGTCCCAGGACTCCTCGCAAGGAGGTGGATTTCACCTTTAACTACTCAATACCCCACTTCCAGACAGCCAAACCCATCCAGAACATAGTGGTCAACCTGTACATGCCTGAGGTTTATGTGGCTTCTCAGAATGTGATTGAGGCAGTGAGTGGAGAGCTCAGTAAGTTATGGGAGCTGAGGACAGGCCCAGTGGGCAGCCCAGAGTGTCAGACCTGTGGCCTGTGTGACATCGAGGCCGATCTTGAGGACTCAGTAGACACGGACAATGAGGTCCTGCTCTTGGACCCATCACCTTATCTTAACTCTCTGTACTCCTGTGGGAGTTCTCAGCATGGGATCTGCCATTTACATGAACTTAGCTTTAATGATACCCCACCTAAATCTGAATGTCTCTTCAGGAAGGATGCTAACTCTCCGTCCCTTTGCCCTGACTGCCTGGCCAGCCCCCTGGGCACTGAGGTCATCATCGTGGAGCAAGGCCACACAGCCTACTTCTTTGTAGCGGCTACACTCAATGAGCGTGTGGCACAGAGGTACGGCAGACCGTCCTTATCGGTGCGCCGGCCACTGTCGACCCTGGATGGCTTTGAGATGGTCATGCAGGGTCTGACTGTGCTCCCTAAACTACAGAACTCCTACCAGATCGACTACATCTACAGCTTCTCCACACAGGACTATGTCTACTTCCTGTCTGTCCAGAGGGAGAACTTCCTGGACTCATATCAGACTCGGTTGGGCCGTCTCCCGGTGAAGGACACGGAAGCGTGGCTGTACCGTGAGGTGGTGCTGGAGTGTCGCTTTGAGCCCAAACGCaggcggaggaggagggggggggacaaTATTTTCCAGGACGTGGTGTATAACAGGCTGCAGGCGGCCCACTTCAGCCGGGCAGGGAAGGAGCTGGCAGAGGAGCTGGGGGTGGGGGAGAAGGATGACATTCTCTATGGAGTGTTTGCAGTGACAGATGGCTCTGGGAGGCCCTACAGTAACTCAGCCATGTGTGCCTTCCCCATGCCCAACGTGAACAGGGCCATCGACCGGGGAGCAGAGGACTGCTGCAGGTCCAGCACAGAGCAGCTCTCCAGGGGGCTCTGCCACTTCCAGCTCTGCGAGAGCTGCCCTCATGAGAGCTCCGACAACAACGCTACATGCATGGCCAAGTCCACCCTGGTGTCTAAGCCATACTACAGGTTGGACCTCTTCAACAGGTACATGAACAACATCCTGCTCACCTCAGTACTGGTCACCATCATCGGGAACAACACTGTGGCACACATTGGCACCAAGGACGGCAGGCTGTTGCAgCTCATCCTGAGGAGGTCAAATCCCATCATCTTCGCCAACTATTCTctgggagaggacaatgaggtgTCCAGGAAAGCTGCTGTGCAATCTAACGAGTCCTTGCTCTTTGTGGTTGGAAATAAGaTGTTCAGTGTGTCTCCTAAAGGACCAGGATGTAAACACTTCCTGACCTGCTCCACGTGTCTGATGGCGCCCAGGTTCATAGGGTGTGGCTGGTGTTCGGGGGTGTGCTCCAGGCAGGAGGAATGCCTCATACAGTGGAAGAGTGAGTCCTGTCCTCCCGTCATCACAAAGTTTTTCCCAAAGACGGCTCCCCCTGATGGTGAGACAGAGCTAAGGCTGTGTGGCTGGGAGTTCCAGTCTCCTCTACGACCAGCCATCATCAGCGAGGAGACCCACCTGGTGCGAGTGGGAGCGACTCCCTGCACTGTGCTGTCAGAGAAGAGCAATAGTACACAGCTGGTGTGTAGCATTCACCCTAAGGTTCCGGGTCCATCCCAGGATCTCAACATCACCGTGGCGGTGCATGAGGGGAAGGTGGAGGGACGCTACTCAGTTGAAGGCCAGGACCAAATGATAGGGTTCACTTTTGTGGAGCCAAGTATCACAGAAATCACTCCTGACTATGGGCCTCAAATAGGGGGAACCTTGGTCACAGTGACAGGGCCTCACTTGAACGCTGGGATGATAAAGACTGTGTCTATAGGAGACCAGGACTGCCCCATCAAGAGTGTCACTGAGGGTACTGGGACCATGTCCTCCATAGTCTGCCTGTCCAAAGGGTTGGCAGTGGTGAAGAAGGTGCCTGTCAGGGTTTTCATTGACAAATCCCAAGTGGCTACTACCAAGATGTTTCACTACAAGAAGAACCCTGTGATCACTGTGATACAGCCAGTCTGCAGCTTCAGAAGTGGATCCAAAATCATCATCAAAGGCAGTAATCTGGACTCTGCGTACAACACTGTGATCCGCTACAAATCCCACAACCCCTCACAGAAGCTTCTGCAGCGTGTCTGCAACGGCACAGCAACCCCCACACATATGGAGTGCTTCGCCCCTGTTTTCCCCAGGAATGAGACCGACAAGGGCATCATCACTATCAACATGGACGGGGCCAACAAACTTGTGGTGAAGCGCTTCGAATACCAACCAGACGCCAGCATCACCCCCTTTGAGTACGAAGGCAACGTACTGAGCCTGAGCCCTGGACAGACTGAGGTTTCCCTGCATCACAACAAGCTGAGCATGGTGAGTCCCTGTATGGAGATTACAATGAGCATTGGAGGTGTGGACTGTGGTGTCCAGGTACTGGACAACGAACTGACCTGCAGGATCCCCAAGAATCTCATCATCCCCAGTGAAGGGTCACCTGTCAGGGTGTCTGTGAATGGGCATGCCTATGAGGTGGGCACTGTGGTCTTCTTCAGCAACCCTGTCAACACAGTGGGTGTGGTGATGGGGATCTTTGCTGCATTGTGCGTTGGCGCTGCCCTGGCTTTCATCGCCATGACACATGTGAGGAGGAAAAAGAAAGAAATTTCAGCCAATGTAGAGACTCGTTTAGCAAGGATGTCCGTCCGCAGAAGAATAAGCAGCAACCCTGACCTATCGCCCACAGGTGACTATAGACGAGACCTGTCCTCCCAGCCGAGCCAGACGACAGGCTCAGGAGGGATAATCTTCCATGGCCTGGTCTACACTGCCACCTTTGACCCCTTGGCCGTGCCTCTGATCTCAGTGGACACCCTGAAACCTGAGCTcctggaggaggtcagagacgtcCTGATCCCAGCCGACACTGTCAACATTCACCGCAACCAGATCATTGGCAAAGGTAATTTTGGGACTGTGTACCATGGTTACCTAACAGACAACAAGAACCAAGAACAGTTAATCCACTGTGCTGTTAAAGCATTGAACAggATCACGGCCCTGGAGGAGGTGGAGCAGTTCCTGAGAGAGGGCATCCTGATGAAGGAGTTCCACCACAACAACGTTCTGTCCCTGCTGGGCATTCTTCTGCCTCAGGAGGGGCTCCCCCTGGTGGTGCTGCCCTTTATGAAATATGGAGACCTGCGCCACTTTATACGCTGTGAAAGGAGGaacCCAACAGTGAAAGACCTGATTGGCTTTGGGCTGCAAGTTGCCAAAGGGATGGAGTACCTGGCCCAGAAGAAGTTTGTACACAGAGACCTGGCAGCTAGGAATTGCATGCTTGATGAAACGTTCACGGTGAAGGTGGCAGACTTCGGCATGGCCAGAGATGTGTTTGACAAGGAGTACTACAGCATCCAGAACCACAAGAAGGCCAAGCTGCCAGTCAAGTGGATGGCCATAGAGAGCCTGCAGACACAGAAGTTCACCACTAAGTCAGATGTGTGGTCATTTGGGGTCCTGATGTGGGAGCTGTTGACCAGAGGAGCTAGCCCCTATCCTGAAGTGGACCCCTATGACATCACTGAATTCCTGTTGAAGGGGCGCAGGCTTCCCCAGCCACAGTTCTGCCCTGATGCCCTGTACTCAATCATGCTGGAGTGCTGGAACCCGGAGCCGGAGCTCAGGCCTGATTTCCACACGCTGGACCAGGAGGTGCTGGAGATCTGGTCCTGCCTGGAGGGAGAGCACTACATCAGCCTTAAGGTAACCTACGTCAACCTGGACCAGCCACGGCCCTACCCCGCCCTGACCGCCTCCGCTGACAAGGCTGAAGCCTCTTCTGGATCAGAGTCAGACAGCGTTATGTCCAACTGACTGGACCACACCAGAACTGACTGGACCACACCAGAACTGACCAGACCAGGACAGGGACagtagagagaggtcagagggcaCGGATGAAAGGCTTCTTCTTTTCCTATCCACGCAGTATGCAGAAAGAATCTTGCAGTTCTGTTACTTGAGACTGGATTGGGAAGGAATAAAACATTGACTATTGACTAAATTTGTCCAATTGTGTGAGTTTCCCCCACCGTGTGTACACAAATTATGTCTATATCATATTTTTGTGTACTTTTAATGTTTTCTTAAAGGTAGGTTTTCAGTTGGAGAAATTGCATTTATGGGACACCAAGTGAACCCTCTCCATGTCTGAAGCACAGCTGTAAATATGAACAAATGAATGTAAATGTCTGAAATGTGGATATGTTATGCTAATTAATTACTATGATTTAAGCTTGACATTAATATGTTTAATAGGATGGATATAGTATGTCAGATTTTGCTAACTTTTTTgctatggctgtgtttacacactgATATTTTTGTCACTATTGGTCTTTTGACCGATCAGAATTGTGCTACATGTGTAAACACAGTTTTCGAGATGGTCAATTGTGTTGATCATTTGATTTATGGTATGAAATATGTCCACTGACCAAACTGGTCAAGTTttctgcatttacacaggcaccccaattctaatatttttttcactaactaattggtcttttggccAAACAgatctgaaaaagatctgatgtgaaaagatctgatgtgattggcaAAAAAACGAATTAGCGGCGGGAaaaatctgaattgggctgcctgtcaaCTGGGCTGCCTGTCAACTGGGCTGCCTGTCAACTCAGCCCTTGAGATTCACAAGGACACACTTCTGAGAGGATAGTTCAGTTAGCCATCCTTGTGAATGGGTAAGCTTTAAATTGCCCTTCCTCTTCAGAGAAAATCATAATAGGAATACTAATTGATACTCAGGGAGTCAACATATACATTTGTCTGGTTTGAGAAATAAACCTGTCTTTTATTAAAGGGAAA

Function

NR:

description
macrophage-stimulating protein receptor-like

GO: NA

KEGG:

id description
K05100 MST1R, RON, CD136; macrophage-stimulating 1 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950740.1 True 5633 mRNA 0.51 21 80554017 80581837

Neighbor

gene id symbol gene type direction distance location
trnai-uau-36 NA coding downstream 61201 80492723 ~ 80492816 (-)
trnai-uau-35 NA coding downstream 63666 80490258 ~ 80490351 (-)
trnai-uau-34 NA coding downstream 69537 80484387 ~ 80484480 (-)
trnai-uau-33 NA coding downstream 71033 80482891 ~ 80482984 (-)
trnai-uau-32 NA coding downstream 73497 80480427 ~ 80480520 (-)
LOC110494678 LOC106566067 coding upstream 94515 80676352 ~ 80680210 (-)
gnai2b LOC106566064 coding upstream 101346 80683183 ~ 80781256 (-)
LOC110494674 LOC106566062 coding upstream 201898 80783735 ~ 80842201 (-)
LOC110494672 LOC100380672 coding upstream 286292 80868129 ~ 80882244 (-)
LOC110494680 LOC105023696 coding upstream 300616 80882453 ~ 80884866 (-)
G1494499 NA non-coding downstream 51898 80501539 ~ 80502119 (-)
G1494487 NA non-coding downstream 64724 80484931 ~ 80489293 (-)
G1494473 NA non-coding downstream 73606 80423310 ~ 80480411 (-)
G1494394 NA non-coding downstream 200787 80352982 ~ 80353230 (-)
G1494392 NA non-coding downstream 205215 80348280 ~ 80348802 (-)
G1494877 NA non-coding upstream 34569 80616406 ~ 80616897 (-)
G1494932 NA non-coding upstream 126243 80708080 ~ 80708400 (-)
G1494987 NA non-coding upstream 271709 80853546 ~ 80853878 (-)
G1494988 NA non-coding upstream 272277 80854114 ~ 80854334 (-)
G1494054 NA other downstream 466380 80071639 ~ 80087637 (-)
G1493395 LOC106582800 other downstream 1204628 79348231 ~ 79349389 (-)
G1492898 NA other downstream 1738588 78771571 ~ 78815429 (-)
G1492901 NA other downstream 1740062 78803860 ~ 78813955 (-)
G1492910 NA other downstream 1772622 78778352 ~ 78781395 (-)
G1494870 NA other upstream 16157 80597994 ~ 80598532 (-)
G1494924 NA other upstream 110585 80692422 ~ 80694102 (-)
G1495003 NA other upstream 313251 80895088 ~ 80895437 (-)
G1495113 NA other upstream 484134 81065971 ~ 81066682 (-)
LOC110494689 LOC106566051 other upstream 511682 81090497 ~ 81103942 (-)

Expression


Co-expression Network