LOC110494678 (LOC106566067)


Basic Information

Item Value
gene id LOC110494678
gene name LOC106566067
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 80676352 ~ 80680210 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569963.2
TGCGCTCACAAAATAAACTGCCAGCCACATCACATGCACTCTTCTGTCTGAGGTGCGTTGAGTGGACATCGGACCTACTGAGGAAGTTGTGAACCGTTTTGGATTAATTGTTCTATTAGAGGAGTCAATTATTGACCAATGATAAAGTAATCAATTTGGAATTCAGACAGACACGATAAGAGCAATGGACTCTGAAGACTGTCTGGTGGACCAGATGCAGTACATGAGGTCCCTGCAGGACCTGAAGCACATGAGCCGACCGCTCAGCGATCCCTCTGGCCGGTCCTATGCCATGACCCGTGCCTGCCAGCAGAGGGCTCAGCAGCGGGAGCGCCTGTCACGCCTCCGTAGGCCCATCTCTGAGGCCAGCACTTACGACTCAGCTTGCTGCCTGGCCAGCccaatggaggaggaggagcaggaagggAAGAAGCGGCTAATGCAGGGCTCCCCCAGCAGTGACAAGAGTCTGGAGTTTGACTCAGGCTACTCTGAGGCATCCTGGCAGGACGAGGATGTGGTGCTCAGGAGGACCAGGAACGTACGCGTGTCTAACTCCGCCTGCCTCCGCACCAACCGGGGAGTGGGTCCCGCCGGCCGGATCCGGCCCAAATCCACTTCTGACGCTTGTCTGGAGCGCTGGACGTCATTTGAGGCGAGCAGCGACCCAGAAGACTGGACCACGTCACTGCTGAGCCGCAGCAGGAACAGACAGCCCCTGGTGCTGGGGGACAACAGCTTCGCTGACCTCATTAAGAACTGGATGGACCTGCCAGAGTGTCCTGAGCCAGCAGAACTCAAGCCCCATGCAGGCCGGCGCCTGGCAAAGGACCTCCTGGTCAACATGAGGAGGAAGCTGGCAGGGATGTCTAAGAGCGTGGAGATGAGGGCCAGACCAGCAGACAGCACCAGGGCCAGTAGGGCCGCGGTGGCCCCCAAACGCATGTCCTGCCCCGTGGGCTTCCAGCCACGCAAACCGTTCTTTCACCAGTCCCACACAGGCCTGCACCAACTGGGAACAGACTTCTACCAGTTCACTGCTCTCATGAAGACAGGCAGCCGACAACCTATCATATGCAATGACATCATCGGGTACGTCTGATTGGAGTGATGTCAAAACTACGGATTCTTACCACAGATTTACATAatgttatttaattttttttatatgtGCTTTATGTTGAAATAATGTTGAAATTGTTACAATAAAAATGTTTGTCTAatgaaaata

Function

NR:

description
PAK4-inhibitor inka2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569963.2 True 1231 mRNA 0.54 3 80676352 80680210

Neighbor

gene id symbol gene type direction distance location
LOC110494670 LOC106582756 coding downstream 94515 80554017 ~ 80581837 (-)
trnai-uau-36 NA coding downstream 183536 80492723 ~ 80492816 (-)
trnai-uau-35 NA coding downstream 186001 80490258 ~ 80490351 (-)
trnai-uau-34 NA coding downstream 191872 80484387 ~ 80484480 (-)
trnai-uau-33 NA coding downstream 193368 80482891 ~ 80482984 (-)
gnai2b LOC106566064 coding upstream 2973 80683183 ~ 80781256 (-)
LOC110494674 LOC106566062 coding upstream 103525 80783735 ~ 80842201 (-)
LOC110494672 LOC100380672 coding upstream 187919 80868129 ~ 80882244 (-)
LOC110494680 LOC105023696 coding upstream 202243 80882453 ~ 80884866 (-)
LOC100135925 LOC106566059 coding upstream 207247 80887457 ~ 80888831 (-)
G1494877 NA non-coding downstream 59455 80616406 ~ 80616897 (-)
G1494499 NA non-coding downstream 174233 80501539 ~ 80502119 (-)
G1494487 NA non-coding downstream 187059 80484931 ~ 80489293 (-)
G1494473 NA non-coding downstream 195941 80423310 ~ 80480411 (-)
G1494394 NA non-coding downstream 323122 80352982 ~ 80353230 (-)
G1494932 NA non-coding upstream 27870 80708080 ~ 80708400 (-)
G1494987 NA non-coding upstream 173336 80853546 ~ 80853878 (-)
G1494988 NA non-coding upstream 173904 80854114 ~ 80854334 (-)
G1495001 NA non-coding upstream 212005 80892215 ~ 80893023 (-)
G1494870 NA other downstream 77820 80597994 ~ 80598532 (-)
G1494054 NA other downstream 588715 80071639 ~ 80087637 (-)
G1493395 LOC106582800 other downstream 1326963 79348231 ~ 79349389 (-)
G1492898 NA other downstream 1860923 78771571 ~ 78815429 (-)
G1492901 NA other downstream 1862397 78803860 ~ 78813955 (-)
G1494924 NA other upstream 12212 80692422 ~ 80694102 (-)
G1495003 NA other upstream 214878 80895088 ~ 80895437 (-)
G1495113 NA other upstream 385761 81065971 ~ 81066682 (-)
LOC110494689 LOC106566051 other upstream 413309 81090497 ~ 81103942 (-)
G1495222 NA other upstream 430235 81110445 ~ 81115238 (-)

Expression


Co-expression Network