LOC110494693 (LOC106566045)



Basic Information


Item Value
gene id LOC110494693
gene name LOC106566045
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81342197 ~ 81374548 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036950748.1
GGCACATGATACCTCTGTTTACAGCCATCCGTTAAAAACATGGAGGACGCGACCAGCACTAATCCTCAATCTCTTGGATTTACAGATAAATTAAAATCATGGTTGTCCTGGTCATGGACATACATATGTGCCGTTTGGTTTGCTATGGTTTTAACTATGATCTATGTTCTGCGAAGCCCCTTGAAACTGCAGGACACTCTTACCTCAGCATCTGTGTTCTTGAATACACTGACCCCTAAATTCTATGTGGCACTCACTGGAACATCCTCTCTCATCTCTGGCCTAATCTTGATATTTGAGTGGTGGTACTTCCGTAAGTATGGAACCTCATTCATCGAGCAGGTGTCTGTTAGCCATCTGCGACCCCTCCTAGGTGGGGTGGAGAGCAGCTCAACCACTGGCCTGTTCTCCTCAGTCAACGGAGAGGCTGAGCCCAGACCCAGTGTCTCAGAGTGTAAAGTTTGGAGGAATCCATTAAATCTATTCAGAGGAGCAGAATACAGCAGGTACACCTGGGTGACTGGAAAGGAGCCTTTGACGTACTACGATATGAACCTGTCTGCTCAAGACCACCAGACGTTCTTCACTGGTGACACTCAGCAAATCAAGGCTGAAGATACTGTGATGCAGAAGGCCTGGAGGGAGAGGAATCCCCAAGCCAGGATAAGAGCAGCTTACCAGGCCATAGAGATGAACCACGAGTGTGCTGCTGCCTATGTGCTACTGGCAGAGGAGGAAGCCACCACCATCACAGAGGCTGAGAGGCTGTTTAAACAAGCCCTGCGGAGTGCTGGCAAAGACATCAACTTGCTGGTGTACATCAAACGCAGACTGGCCATGTGTGCACGCAAGCTGGGACGCATCAAGGAGGCAGTGAAAATGATGAGAGATTTAATGAAAGAATTCCCACTGTTGGGAATGTTGAATATACATGAAAACCTCCTGGAGGCACTACTGGAGCTGCAGGCCTACGCTGATGTACAAGCAGTCCTCGCCAAATACGACGATATCAGCTTGCCAAAGTCAGCCACTATATGCTACACATCTGCACTGCTGAAAGCACGGGCTGTATCAGAGAAGTTTTCTCCTGAGGCAGCATCCCGGCGGGGcctgagcactgcagagatgaacgctgtggaggctatacacagagcCGTGGAGTTTAACCCACATGTGCCAAAGtATTTATTAGAGATGAAGAGTCTGATCCTGCCTCCAGAACACATCCTGAAGAGGGGGGACAGCGAGGCGGTGGCCTACGCCTTTTTTCACCTGCAGCATTGGAAGAGGGCCGAGGGAGCCTTAAACCTGCTGCACTGCACCTGGGAAGGCACTTTTCGGATAATTCCCTACCCTCTAGAGAAGGGTCACCTGTTTTACCCCTACCCTGGGTGCACAGAAACAGCAGATCGGGAACTGCTGCCGACCTTCCATGAGGTGTCTGTGTACCCGAAGAAAGAGCTTCCCTTCTTCATCCTCTTCACAGCGGGCCTTTGCTCCTTCACTGCCATGCTGGCCATGCTCACACACCAGTTCCCTGAGCTCATGGGTGTCTTTGTCAAAGCATTCTTCAGCACCCTCTTCACACCCCTGGGTTTCTTCGCAGACAAGATGGAGAGCTTCATGCCATCCAGTTTCTGGCATCAGCTGACTCGAATCTGACCCCAtctcacacacgtacacatacacacccctCAGACACCAACACTCCAAAACTACAGACAGAAATGTTTGCTCTCCTGTCTTCAGCGTgcacacacacttgttgttttggTACTGATTATGTTGGCCAAGTCTTGTATCAACATCCAGACGCAACTCAGAGATGCAACTGCTAAGAAGCCAGGTTTTTAAAGTAAACATTTACCAGATATTCACGCAGTTATTCGTTTATTATTATTACAGGAACTTGAAGTTATGTTGAGTTACACAGAACGGTAAATAGAAAGTATTTCAACCTACATTTGACTTCCAAGTCCCACCTCTAAATTACGTCAATCTCTCATACACTTCTGAATTAAGTGCTGAAACAATAAATGTATTATTAGTTAATGTCTCATTATTGTGAAGGCTAACACTACAGTTCATGGAAGTAGTATCCCTCTGTTCTAGTTAGGGTTGCAACTTTTGATAAATTCCCTGATTTTCCTGAGATCCTGGTTTTAGAATTCCTCTACTGATTCCCCTCCTTATTCCCCTACTGATTGCCCTACTGATTCCCCTCCTTATTCCCCTACTGATTCTGGGAATCCTCCAACTGGGATTCTGGGAAAAAcatggaatttattgaaagttcctgaAATGTTGCCACCCTGGTTCTAGTGCTGCTATTCATAATATCTTTCCAAATGTATTGTCTGTTAGCTGGTGCAGCAGGAGACAGATTGATATCTATAGAAAAGCATACTAGAAGGCCTGTTTTCCACGATTTCATGTCTGAACAGACACATTAATGTTCACTAGAATAAGGTagagccatgtatttagagagttgggACATTGTGGTTTCTGCTttatgatgcatttacatgaGACAACAAtacatggcagccatgttagcggCCATTTACATTACATGGGAAATATGTCTATAATGCTATGTAACAATGTCTAGAATTAGAacaatatcatttaaaaaaaaatctaaatacatggctctggaATAAGGTATGTGTGTCATGCCAGTTCAGATGGGTTGAAACAAAGCATAGCCTTTATGGTACATAGTCATCCTATGGGGCAGAGTTTAAGTTTTTGAGACCTTCTAAAAACAGATCCTTGATTTACTGCTTCACTCTGTCTGTAGTGTATACAATGCCTGCAGTGTTTTGCCAGTTGTTGCCACAGCATGCCACCTCCGCGCTATATCACTGGCAACCTGCGCCCCCTCAAACGTAGCATAAACATGTAAGTGGGATTATGACCGGTTACGGCATGGGTAGTCATGGCATCACTCACAGCCAATCACATAACTGAACGCTGCGCTTCCAGGTCCTCTATGAGTTGTAGTCAACTTGTATTGCTCAGGTGTAATCAGCCAATCACAACAGGCCGCTTTGTTTGAATCACTGTGTGGTTtcacagtagcctcaacagcaaaTACTCTGAACCGTGATCTAAGACTAGTcaatagcctacagtatatattgtggCAGGACTCGATATTTGATCATGAATAGCATAAAGGGCCTTTTGTACCTCACTGGCTCAACAGACAGATTGGATTTAAGCGGCTTGATGAAATTGAAAGCTATTTCTCACAATACTCCCAGATATGTATTGTATTGATGAACCAATGTTTCGGCACACAGTGGTTTCAGAACCTGCTCATTCATTTGCTAATTCCTTCAACTATTTTATGTATTTTATCATACATAAACCCAATTATGAGTAAAGATGGCAACAAGAGCTGACTGTTTATTGGTTGCTGGTAGTGCATTGCATCCAGGGCCGGACTAATGCATTTTGGGCCTCGGggccccaaaaaatatatattttgggagGAGAATACAGCTAACTTTCTGCATTTCAACATGTGCAGTTTTataatgcaattctacacattttgtcacgtGCCCGTTCGGTAATCCCGCCCTGTTTGCATAATGTGATATTTGTGCACTGTGCTTGAACAGCACTTATAATTGGTTTGCTACTTTCATTCAATTTATGTGTCAGAGCCATCAACACTCCTACCTGGCTATACTGTGCACTATCTGGGTGTAATTACTGTACACTATTTTAATTCCATACTGTTGGATTATATTTGGGATAGTCCAGAATAACAAGATGAAATGCTGAAGACAGAAGTCCTATTTGAACTTACGAGTTATATGAGTTAGATAGCTCACAACAAATTGGTTCTTGAATGTAAATCTAATGCGTTTGTGTTTGAATTTTTGTTGTACTTTGTGaacaaataaatttaaaaaacaga

Function


NR:

description
PREDICTED: suppressor of tumorigenicity 7 protein-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036950748.1 True 3937 mRNA 0.44 15 81342197 81374548

Neighbor


gene id symbol gene type direction distance location
LOC110494690 LOC106566049 coding downstream 103568 81115867 ~ 81238629 (-)
LOC110494689 LOC106566051 coding downstream 238255 81090497 ~ 81103942 (-)
LOC100135925 LOC106566059 coding downstream 453366 80887457 ~ 80888831 (-)
LOC110494680 LOC105023696 coding downstream 457331 80882453 ~ 80884866 (-)
LOC110494672 LOC100380672 coding downstream 459953 80868129 ~ 80882244 (-)
LOC110494695 ppm1h coding upstream 21522 81396070 ~ 81420330 (-)
LOC118940159 LOC106565892 coding upstream 106734 81481282 ~ 81488954 (-)
LOC110494699 LOC106566041 coding upstream 496526 81871074 ~ 81887569 (-)
LOC110494702 LOC106566039 coding upstream 538999 81913547 ~ 81926173 (-)
LOC118940497 LOC106566077 coding upstream 562281 81936829 ~ 81973979 (-)
G1495556 NA non-coding downstream 3728 81333479 ~ 81338469 (-)
G1495540 NA non-coding downstream 24490 81317496 ~ 81317707 (-)
G1495539 NA non-coding downstream 24706 81316935 ~ 81317491 (-)
G1495537 NA non-coding downstream 25429 81315670 ~ 81316768 (-)
G1495536 NA non-coding downstream 31783 81309999 ~ 81310414 (-)
G1495542 LOC106566046 non-coding upstream 3583 81378131 ~ 81380670 (-)
G1495591 NA non-coding upstream 48702 81423250 ~ 81423498 (-)
G1495592 NA non-coding upstream 51906 81426454 ~ 81426676 (-)
G1495609 NA non-coding upstream 75979 81450527 ~ 81451217 (-)
G1495634 NA non-coding upstream 119139 81493687 ~ 81494504 (-)
G1495552 NA other downstream 15084 81326685 ~ 81327113 (-)
G1495538 LOC106566048 other downstream 27882 81311747 ~ 81314315 (-)
G1495222 NA other downstream 226959 81110445 ~ 81115238 (-)
G1495113 NA other downstream 275515 81065971 ~ 81066682 (-)
G1496390 NA other upstream 797921 82172469 ~ 82174852 (-)
G1496689 NA other upstream 860580 82235128 ~ 82245987 (-)
G1496921 NA other upstream 1279924 82629246 ~ 82661638 (-)
G1498077 NA other upstream 2230695 83605243 ~ 83605753 (-)
G1498442 NA other upstream 2607793 83982341 ~ 83982894 (-)

Expression



Co-expression Network