LOC118940160


Basic Information

Item Value
gene id LOC118940160
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 81986912 ~ 81988396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948437.1
ATGTGGGCATGCCTGGCCAAACTCCCCACAGCTAAAGGAGAGGAGGCCTTGAGGTCAGAGAAGACGCCTGGAGGGTGCAAGCCTGATTCACCACAGCCTAACTCCCCACAGTCAGAGAAGACGCCTGGAGGGTCCAAGCCTGACTCACCACAGCCTAACTCCCCACAGTCAGAGAAGACGCCTGGAGGGTCCAAGCCTGACTCACCACAGCCTAACTCCCCACAGTCAGAGAAGACACCTGGAGGGTCCAAGCCTGACTCACCACAGCCTAACTCCCCACAGTCAGAGAAGACGCCTGGCGGGTCCAAGCCTGACTCACCACAGCCTAACTCCCCACAGTCAGAGAAGACGCCTGGAGGGTCCAAGCCTGACTCACCACAGCCTAACTCCCCACAGTCAGAGAATACGCCTGGAGGGTTCAAGCCTGACTCGCTACAGCCAAAGCAGAGGAGGACTGGAGGGTCCAAGCCTGACTCACCACAGTCAGAGGAGAGGCGGCCTGGGGGGTACAAGCCTGACTCCCTACAGCCAGAGGAAAGGAGGCCAGGAGGGTTCAAGCCTAACTCCCCAAAGCCAGAGGAGAGGACACCTGGAAGGTGCAAGCCTAAATCCCTACAGATATGGAGGCCTGGAGGGTCCAATTCTAACTCCCCAAAGCCAGACGAGAGGAGGCCTGGAGGGACCAAGCCTGACACCCCACAGCCAGTGGAGAGGAGGCCTGGAGTGTGCAAGCCTGACTCCccacagacagaggagaggaagcctGGAGGGCCCATCCCTAACCCCCCACAGCCAGAGGAGAGAAAGCCTGGAGGGCCCATCCCTAACCCTGACTTCCCACAGCCAGAGGAGAAAAGACCTGGTGCAATTCTGACTCTCTACTGCCAGAGAGGAGGTTTTGAGGGTCTAAGCCTGACTCCACacagccagaggagaggaggcctGGAGGACTCCCCCTTCTTACCCTCTGACTGGTGGTTGCAAACGGAGAAAGACCGCTTCCTCTTCTTCCAGACTCCCCCACACagcctcccccatctccccacacagcctcccccatctccctcacaCAGCTTCCCCTAA

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948437.1 True 1083 mRNA 0.59 4 81986912 81988396

Neighbor

gene id symbol gene type direction distance location
LOC118940497 LOC106566077 coding downstream 12933 81936829 ~ 81973979 (-)
LOC110494702 LOC106566039 coding downstream 60739 81913547 ~ 81926173 (-)
LOC110494699 LOC106566041 coding downstream 99343 81871074 ~ 81887569 (-)
LOC118940159 LOC106565892 coding downstream 497958 81481282 ~ 81488954 (-)
LOC110494695 ppm1h coding downstream 566582 81396070 ~ 81420330 (-)
LOC110494709 LOC106566033 coding upstream 167637 82156033 ~ 82163096 (-)
LOC110494710 LOC106566032 coding upstream 174745 82163141 ~ 82169801 (-)
LOC110493272 NA coding upstream 213109 82201505 ~ 82201980 (-)
LOC110495198 LOC106566076 coding upstream 217039 82205435 ~ 82208611 (-)
LOC110494717 LOC106566026 coding upstream 441626 82430022 ~ 82443873 (-)
G1496087 NA non-coding downstream 90235 81896454 ~ 81896677 (-)
G1496070 NA non-coding downstream 136025 81850617 ~ 81850887 (-)
G1496064 LOC106566043 non-coding downstream 139377 81844065 ~ 81847535 (-)
G1496066 NA non-coding downstream 143004 81843128 ~ 81843908 (-)
G1496059 NA non-coding downstream 148177 81838346 ~ 81838735 (-)
G1496284 LOC106566037 non-coding upstream 34010 82022406 ~ 82063840 (-)
G1496303 NA non-coding upstream 60202 82048598 ~ 82056759 (-)
G1496286 NA non-coding upstream 77145 82065541 ~ 82066178 (-)
G1496308 NA non-coding upstream 80497 82068893 ~ 82069724 (-)
G1496309 NA non-coding upstream 82474 82070870 ~ 82071176 (-)
G1495552 NA other downstream 659799 81326685 ~ 81327113 (-)
G1495538 LOC106566048 other downstream 672597 81311747 ~ 81314315 (-)
G1495222 NA other downstream 871674 81110445 ~ 81115238 (-)
LOC110494689 LOC106566051 other downstream 882998 81090497 ~ 81103942 (-)
G1495113 NA other downstream 920230 81065971 ~ 81066682 (-)
G1496390 NA other upstream 184073 82172469 ~ 82174852 (-)
G1496689 NA other upstream 246732 82235128 ~ 82245987 (-)
G1496921 NA other upstream 666076 82629246 ~ 82661638 (-)
G1498077 NA other upstream 1616847 83605243 ~ 83605753 (-)
G1498442 NA other upstream 1993945 83982341 ~ 83982894 (-)

Expression


Co-expression Network