LOC110493273 (LOC106566076)


Basic Information

Item Value
gene id LOC110493273
gene name LOC106566076
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82218941 ~ 82220659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567528.2
TAGCATGCATGTGGGGGCTGTGACATTTCAATAAACCTTTTCAATGACCAAGTGAACATCCTCAATTCTAAAGGAACAAGAAACGTGCTGGCAAATCTCCAGAGGTATAGAACAGAGCACACTTAGTGTTAAGTACAGTAAATGCCCATATTGAACTTCCGTTGGAAGAACGACAGGATGCCTGGAGGAGACGTTGTCTACACAGTGCTGGCGGTGCTGATCGCTGTTGCCTGCTGTCTGGGAAATGTCCTGGTGATCTGGGCAGTGTGGTCGAGCAGCAACCTCCGGCAGCCCACCTTCTGTTTTTTGGTCTCTCAGGCTGCAGCTGACTTCCTTGTAGGTTCTGTGGCTGTGCCGCTGGCTGTGCTGGTGGATGGACGGGTGTGCACCTCGTTCAATGTATGTCTCTTCATAAGCTGTGTGGTCATCATGTTGACAATGACTTCGGTCATGTCTCTGCTAGCCATCTCTGTGGACAGATTCCTACGCGTCTTCATCCCTCTCAGGTACAAGAGGACAGTAACAGAGAGGAGATCTTGGGTGGTGGTGGCAATATGTTGGTTTGTTGCCTTCATGTTGAGCTTCCCACCCATGTTTGGGTGGTACAACCATGACACCTTGTCTCACTCAGGGAACTCAACTACCATCATCTGCCGTTTCCTGGCTGTGATTCCCATGTCATACCTGGTTTACTTTGCATTCCTCCTCTGCACCCTGACTCCGTTGCTTGTCATGGCTGTCCTATACTGCTACATCTTCTGTAGCATCCAGAGGAACttgagagagaaggtggggagctGTGCCCAGTCCCACACCTACTTCAGGAAGGAGAGGAGCCTGGCCCGATCCCTGACTCTGGTCCTGGTGCTCTTCGCCTTTTGCTGGCTCCCTCTGGACATCATGAACTGTGTTGCCTACTTTGGTAACCCATCAGACATACCCCAACAGGTCTTCTACGTGGGCATCCTCCTCTCCCATGGCAATTCAGCTGTCAACCCGATCGTTTATGCCTTCAGGATCCGCAAAATCCAGGAAGCGTACCTGAGGATATGGAGGAAGGTCTTTGTGTGTCGAGGTGACAGTCAGGGCTCTTAGAGCAACCACACCACTGAAAAAAATATTAGCAGCAACCCTGACAGTGCGACCAGAAATACTGATGCAGATGCTATCAGTGTTGTGAAAATCAGCACAGTTGAAGGTGCAGAATGTTAATGGTGTAGGAAGACAACAAAAATGATTGTCGTTTAGCTTTTTTTATCTTTGGCAAAGTGCATCAAGACCTAAGAACCTGAATAGAAAGGGAAAACTAGGGTGTTACATTTCACATTTGTTGAATAAAACTGAGGGTTAATAAATACACAGAGAAGGTTGCAAAGATGTCAAGTAAGAGGGCTCTTTTTCAGTTTCATTTTACTCATCAATTTCCTCTAAAGACTCTCGTTTCTTGAATGTATtgaattttaaatgttttttttctgtatgATCAAATTGGCAAGAAATGGAAATAACATGATTTATATGGAAGTTTCCTATTAATATGTAGATGTCTAATCTGAAAATGTAAATGTGAATGTGGATTGGGCATATGAAACAAGGAAATAAAAATTGCAATCTCATTCAATGATTTGTCTGCT

Function

NR:

description
adenosine receptor A3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567528.2 True 1634 mRNA 0.45 2 82218941 82220659

Neighbor

gene id symbol gene type direction distance location
LOC110494708 LOC106566034 coding upstream 63052 82152171 ~ 82155889 (+)
LOC110494706 LOC106566035 coding upstream 113142 82102024 ~ 82105799 (+)
LOC110494705 LOC106566037 coding upstream 155082 82041470 ~ 82063859 (+)
LOC110494703 LOC106566038 coding upstream 171656 82037573 ~ 82047285 (+)
LOC118940161 NA coding upstream 192316 82024067 ~ 82026625 (+)
LOC110494711 LOC106566069 coding downstream 6119 82226778 ~ 82233962 (+)
LOC110494713 LOC106566029 coding downstream 43401 82264060 ~ 82275994 (+)
LOC110494715 tead3 coding downstream 56691 82277350 ~ 82353407 (+)
LOC110494716 LOC106566027 coding downstream 170784 82391443 ~ 82403512 (+)
LOC118940498 LOC106566024 coding downstream 241028 82461687 ~ 82518805 (+)
G1496347 NA non-coding upstream 7302 82136478 ~ 82211639 (+)
G1496351 LOC106566032 non-coding upstream 49191 82163138 ~ 82169750 (+)
G1496333 NA non-coding upstream 91936 82126669 ~ 82127005 (+)
G1496330 NA non-coding upstream 93444 82124947 ~ 82125497 (+)
G1496280 NA non-coding upstream 105133 82113544 ~ 82113808 (+)
G1496443 NA non-coding downstream 4006 82224665 ~ 82224904 (+)
G1496464 NA non-coding downstream 25726 82246385 ~ 82246616 (+)
G1496466 NA non-coding downstream 27543 82248202 ~ 82248401 (+)
G1496471 NA non-coding downstream 38793 82259452 ~ 82259693 (+)
G1496455 NA non-coding downstream 55775 82276434 ~ 82276887 (+)
LOC110494698 LOC106566043 other upstream 385840 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 616784 81432188 ~ 81602161 (+)
G1495362 NA other upstream 880778 81337017 ~ 81338163 (+)
G1495346 NA other upstream 925015 81293440 ~ 81293926 (+)
G1497918 NA other downstream 1393606 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1659273 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1905178 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2275270 84495929 ~ 84497398 (+)
G1498912 NA other downstream 2295458 84516117 ~ 84567678 (+)

Expression


Co-expression Network