LOC110494711 (LOC106566069)


Basic Information

Item Value
gene id LOC110494711
gene name LOC106566069
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 82226778 ~ 82233962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570006.2
CTCGACAGTCTGGTCCAAGAAACAATGCTGTAAAATCCTCAGGATTATAGTTCAGTGGATTACAGTAGAATATTACACTTTCATCAGAATGGCTGACAGGATGTCTGGAGGAGAGGTGGCCTACACAGTGCTGGAGGTGCTGATCGCTGTTGCCTGCTGTCTGGGCAATGTGCTAGTGATCTGGGCAGTGTGGTTGAGCAGCTGTCTACGGCAGCCCACATTCTGCTTTTTGGTTTCTCTGGCTGTGGCAGACTTCCTTGTAGGTGCTGTGGCTGTGCCAGCGGCTATACTGGTAGATGGAAGAGTGCAGATCTCATTCAATGCCTGTCTCTTCATAAGCTGTGTGGAAATTTTGTTGACATTGGCCTCTGTACTGTTTCTACTAGCCATCTCCGTGGACCGATATCTACGAGTCTTCATCCCTCTCAGGTACAAGAGGACAGTAACAGAGAGGAGATCTTGGGTGGTGGTGGCAATATGTTGGTTTGTTGCCTTCATGTTGAGCTTCCCACCCATGTTTGGGTGGTACAACCATGACACCTTGTCTCACTCAGGGAACTCAACCACCATCATTTGCCGTTTCCTGGCTGTGATTCCCATGTCATACATTGTATACTTCAATTTCTTCCTCTGCACCCTCACTCCGTTGCTTGTCATGGCTGTCCTGTACTGCTACATCTTCTGTACAATCCGGAAGAACTTGAAGGGGAGGACAGGGAGCGGTGCCCAGTCCCACACCTACTTCAAGAAGGAGAGGAGCCTAGCCCGATCCCTGACTCTGGTCCTGGCACTCTTCGCCTTTTGCTGGCTCCCTTTGCACTTCATGAACTGTGTTGCCTACTTTGGTAACCCATCAAACATACCTCAACAGGCCTTCTACGTGGGCATCCTCCTCTCCCATGGCAATTCAGCTGTCAACCCGATCGTGTATGCCTTCAAGATCCCCAAGATCCAGGAAGCGTACCTGAGGATATGGAGGAAGTTTGTGTGCCGAGGTGACAACCAGACCACTGAGAATAACACCAGCAGTAACCCTAGGGTAGCCAGAAATGACTGATGGAGGAGTTCATCATTGTGAGTGAGGGACAGTTAGTGACATGTATAGAGTGTGGTAAGAAGTTATAGTTCCAGGGTTTTATTCTCAAATTATTTGATAAGAGTCATTGTAGGGATGCAAAGCTATTTAGAATATGGTCTATATCTCATATTTGTCTTCATGTATTGTATTATCAGTATAATATAAGCATGTGTAGATCAGGTAGAGCTAATGTCAAAGTATTTTACTTTAGCATTGCTCAACTGCGTTGGCATATCACAGCAAATCGAAACTGATGATGAAAATGGAAAGAGTAGTGGGTGTTTAATTTCATTGATGCATTTCCTTTGTATGAATGCCATTTCCTCAATCCAAAAGTTTGTTGTTTCTATAATTGTTACCTTCTGTATGTATACAGTGCTTTCCCAGATTTGGAAATAAGATGTACTATCTCAATGAAGGAGTACTTATCTAATTAACTGTTTTTATGTTCTTTTCAACGCAACCATACACAACGTTCTAACACAACTTTTCCCACAAgattatttttaatttattttgtgGTGGTAATGTTTTTATACCATCAGGTGACACAGAAAGTATACAAATAGGTCTCCATCAAATTCTTTCTTtatcaaaatatacattttctgaGATGAGGAAATCCTCTCTGAAGTTAAGTTTTTATTTCAAAATGGTTTGTAAAATACATACATTACATATGTTGTAATATACAATTGTTGCAGCTAATGATTACATTGTTTCTATTGATTAATGTATATTAACTGGCAGTACATCTCTACAGTTCCCCTGGTCTTGTCTAAGTACACTAGATGGAAGTATGCAGTGGGATATGTATTACATTATTGCAATATGGCATATAGCTATAGATGAACGCATTGTGTTCCTACCAGAGTGATACAATGGCTGGATATACTCTATCAGACCTCCACTGACCTTCGTAACCATTGTGTTTTTTTCCATTAGAGCTACGTACTTTCGGTTTGGTTCACATACTGTAAACTAGGTCATGTTTTAGTGTTCAAGTCATTGTTATACTAGTAGCATCGCAGCGGTAGATGTAGTTTCGTCCACGGTTGTGGTATGTCTATGCAAAACATTA

Function

NR:

description
adenosine receptor A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570006.2 True 2159 mRNA 0.42 2 82226778 82233962

Neighbor

gene id symbol gene type direction distance location
LOC110493273 LOC106566076 coding upstream 6119 82218941 ~ 82220659 (+)
LOC110494708 LOC106566034 coding upstream 70889 82152171 ~ 82155889 (+)
LOC110494706 LOC106566035 coding upstream 120979 82102024 ~ 82105799 (+)
LOC110494705 LOC106566037 coding upstream 162919 82041470 ~ 82063859 (+)
LOC110494703 LOC106566038 coding upstream 179493 82037573 ~ 82047285 (+)
LOC110494713 LOC106566029 coding downstream 30098 82264060 ~ 82275994 (+)
LOC110494715 tead3 coding downstream 43388 82277350 ~ 82353407 (+)
LOC110494716 LOC106566027 coding downstream 157481 82391443 ~ 82403512 (+)
LOC118940498 LOC106566024 coding downstream 227725 82461687 ~ 82518805 (+)
LOC110493275 LOC106566024 coding downstream 299559 82533521 ~ 82636002 (+)
G1496443 NA non-coding upstream 1874 82224665 ~ 82224904 (+)
G1496347 NA non-coding upstream 15139 82136478 ~ 82211639 (+)
G1496351 LOC106566032 non-coding upstream 57028 82163138 ~ 82169750 (+)
G1496333 NA non-coding upstream 99773 82126669 ~ 82127005 (+)
G1496330 NA non-coding upstream 101281 82124947 ~ 82125497 (+)
G1496464 NA non-coding downstream 12423 82246385 ~ 82246616 (+)
G1496466 NA non-coding downstream 14240 82248202 ~ 82248401 (+)
G1496471 NA non-coding downstream 25490 82259452 ~ 82259693 (+)
G1496455 NA non-coding downstream 42472 82276434 ~ 82276887 (+)
G1496453 NA non-coding downstream 108639 82342601 ~ 82343215 (+)
LOC110494698 LOC106566043 other upstream 393677 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 624621 81432188 ~ 81602161 (+)
G1495362 NA other upstream 888615 81337017 ~ 81338163 (+)
G1495346 NA other upstream 932852 81293440 ~ 81293926 (+)
G1497918 NA other downstream 1380303 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 1645970 83879805 ~ 83890067 (+)
G1498583 NA other downstream 1891875 84125837 ~ 84174177 (+)
G1498913 NA other downstream 2261967 84495929 ~ 84497398 (+)
G1498912 NA other downstream 2282155 84516117 ~ 84567678 (+)

Expression


Co-expression Network