LOC110494732 (LOC106566008)


Basic Information

Item Value
gene id LOC110494732
gene name LOC106566008
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83385666 ~ 83387331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570051.2
GCAAGAGCTATAGAGGCTGCGCATGTGTATCCGTTTATTTGCATTTGAGAGaagaaatgcaataaatattgtTGATTCTGTGGATTAAGAGCATTAATCTATCTGAAAATGTCCAAACTGCAGCTGTTGAATACGTTTCTCACCGAGCGATTAACTGCAGCGGCTGTTGAGATATTTGGGGCAGTGGAAAAAACGATAACGGAGTACCAGGAAGAAATCTCCCGTTCAAAGGAGGAGATCGATCGTCTACAAAGGCAACTGCACATCGTTACCCAACCGAAGATAAAGTTACATAAAGCAGATACCCAGCAGCTCATTCTCCCTGTCCCTGAGGAGGTTCCCCTTGAGCAGCAGCACTGTGAGCAGGAGTGGACCCCTGGTCTGGTGCAGGAGGACTCAGACCCCACACAGATTAAAGAAGAACAGGAAGAACTCAGGACCAatcaggaggaagagcagcttcagGGGCTGGAGTCTGATACCAACATTCTAACATGTTCTCCTCCCTTTGTGAAAAGTGACTGTGATCAGGATGACCCACATAAGTCCTCCCAACTTTACCACATACAAActgtggagaacagagagagggactcaCTACCTACCAGCACAATTGAAGAGATCAAAATAGAACCCGATGAAGAGGATTACAGAGTATCAGAACCAACCAGTGACTCTCAAACCCTCTCTGTAGTAACCCCTTACAGCTCCGTGAGCACATTAAATATGAATCAGCTAATTGGCAATGCAGAATCAGACAAACCATTTCAGTGCAATGTATGTGGCAAATTCCTCAAGAGGGAAAAAAGTCTTATCGTGCACATGATGGGTCAtgcaggagagaaaccatttacATGTCCTTTATGTAACAAAGGCTTTGTTGCGGTAGGCACTTTAAAGACACACCTGAAACTTCACACAGGGGAAAGGCCACACCGGTGCCATGTTTGTGGAAGATGCTTTAAACTGAAAGGAGCCCTGACGGAGCACATGAGGATACACACTGGggagaaaccatttagctgtcATGATTGTGGCAAGTGCTTCAGTCGTACAAATGCCCTTACGAATCACATGCTGCACATTCACAAGAAGAAAAGAACGTACAAGTGACCTGCGGAGAAAGAGTCTATCTGAAAAGTAGCCTTCTATCTATATGGCACACTTAAGTAATGCCCTTTTAATTTAATAATGTATGGGTCAATATTTGAAGGAATAAATGTGTTGACCATTTACTAAA

Function

NR:

description
zinc finger protein 329-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570051.2 True 1240 mRNA 0.44 2 83385666 83387331

Neighbor

gene id symbol gene type direction distance location
LOC110494729 LOC106566010 coding downstream 9060 83367244 ~ 83376606 (-)
LOC110494728 LOC106566011 coding downstream 41815 83323505 ~ 83343851 (-)
rs10 LOC106582706 coding downstream 117765 83264536 ~ 83267901 (-)
LOC110494726 LOC106566015 coding downstream 150439 82955510 ~ 83235227 (-)
igfn1.1 LOC106566016 coding downstream 473637 82874237 ~ 82912029 (-)
LOC110494730 LOC106566007 coding upstream 1329 83388660 ~ 83394882 (-)
LOC110494731 LOC106566009 coding upstream 10309 83397640 ~ 83408715 (-)
LOC110494733 LOC106566096 coding upstream 145181 83532512 ~ 83553720 (-)
si:dkey-261l7.2 LOC106566092 coding upstream 221511 83608842 ~ 83629064 (-)
ccdc66 LOC106566088 coding upstream 450520 83837851 ~ 83860046 (-)
G1497887 NA non-coding downstream 6080 83379381 ~ 83379586 (-)
G1497882 NA non-coding downstream 19932 83365528 ~ 83365734 (-)
G1497881 NA non-coding downstream 20420 83364886 ~ 83365246 (-)
G1497875 NA non-coding downstream 27417 83357938 ~ 83358249 (-)
G1497873 NA non-coding downstream 34075 83351303 ~ 83351591 (-)
G1497889 NA non-coding upstream 5714 83393045 ~ 83393287 (-)
G1497891 NA non-coding upstream 7552 83394883 ~ 83395171 (-)
G1497899 NA non-coding upstream 32657 83419988 ~ 83420639 (-)
G1497901 NA non-coding upstream 40570 83427901 ~ 83428108 (-)
G1498010 NA non-coding upstream 47239 83434570 ~ 83524555 (-)
G1496921 NA other downstream 724028 82629246 ~ 82661638 (-)
G1496689 NA other downstream 1139679 82235128 ~ 82245987 (-)
G1496390 NA other downstream 1210814 82172469 ~ 82174852 (-)
G1495552 NA other downstream 2058553 81326685 ~ 81327113 (-)
G1495538 LOC106566048 other downstream 2071351 81311747 ~ 81314315 (-)
G1498077 NA other upstream 217912 83605243 ~ 83605753 (-)
G1498442 NA other upstream 595010 83982341 ~ 83982894 (-)
G1498522 NA other upstream 663679 84051010 ~ 84057392 (-)
G1499671 NA other upstream 1833794 85221125 ~ 85223119 (-)
G1499684 NA other upstream 1899325 85251788 ~ 85288117 (-)

Expression


Co-expression Network