LOC110494735 (asb14)


Basic Information

Item Value
gene id LOC110494735
gene name asb14
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 83562178 ~ 83575184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570056.2
gtgcATTTTGATATTATGTTGCAGAGATGGGCAACTCTGGTGGTCCTCGAAGTGTTGTTTTTGTTCCTTTTCCAAATCGCCAtgtgatttagacctgggataccaggtgtagtgtgtgtgtgtgtgcgtgccattGAAAGAATCAGCTGACATTCTGGCCCCAGAGGACTGAAGTTGCCCATCCTGGTTCCTGATCTGAGGGTCTTCTCTGTTTCACTTCTACATTACCAGGTTGATAATTAGAATAACAACTCAAGCGATTTCTTTTTTATAAAGTTAATGTCCTCAAGATGTGAGTATGTGTTAGCGTGTGATCCTGCCAGCAGAGCGTCTGGTGCCGATGTGTTCAGCTCTACCCAAGCTGTCTGTTCTGGCAATTACATCTTCACCTGTTCCATTTGGTGTTTTATTTATAGCTTGTTTGAGGGATTGTAATGGTTTGACATTGGGTGTCTTGATTGGTCGTAGAGTAGATGCATTTCATCTTCAGTCAAGTTTTGCGCCTCTTGACATGCCACTTGTACCCCTCCAGTAATGAAGAGGACTTATTTCATGCCGTGGCATCATCTGGAACTAACGGGCATGAATGTCAGACAGCTGCCAATAAgaggcaatgttttttttttttctcaaccaTGATTGGTGTATCTCATTTCCTCACACACTTGCCCAAATTTAGCCACACCTGTTGATGTACAATTTACAGTCCTTTTTAACCGGTATAAAAGCTGTCCAACAGATTGTGTGATCCTTGTTTTGGTGTGACATAGTGATTGATTTCGAAGGTGGGAGCATAGATTGCATTGGCCGGAGCCTTTGTTATTAAAACAATTTTAGTCTTGAGCTCGAAGGACCGGACCTTTGAATATGGCAAGAAGTATCTTAGGACATTTTACACAACGATACTAATCCCCTCTTCCAGAATGTAATATCCTTTCATCCCAATTATTAATAGGATTACATTTTGATGTTTGTGATGCAATGTGCAACAGTCTAGACATATTGAGACATGCAGTGTTAACCTGAATGACAAATGATTTGGTGTTGGGGTGGAAGAGGATTTGCTGCAGATTATGAAAGTGACATGTTTGGGAATAATAGAAAGGATATGAAATGGACAGTTTGAATAGAAAAGATCACGTGGACTGGTCGCCAGCTGCTGCTGAAATTATAATTCAGTGGTGAAATTCTTTCAGTTCGTTTAGTACTTTGTCACAGACGGAAAACATGCTGTCAGATCATTCTTATGTTGTGAGAATAATCTGTACTTTCCCTAATCCTttttgtactgaacaaaaatataaatgcaaggTGACATTTTCaacgattttacagagttacagttcatataaattGTCATATTTTGTGTAAATCATTCCAGAGCTTTAAATCATTATTTGTAGCATGTGGCAAATACAACTGGTGTCGACTTTATCGTGAAATGCTTgtttacgagcccttcccaacaatgcagagtttaaaaagaaaatagtaacacacgaggaataaaataaaagacacaagaatggagctatatacagaaagTACCAGTACATCCACTTAGCCTAACTTCCTGTAAGGTTATCAGGTTCAATAAGAGAGATTGTGGTTGTTGCCAAGAGTGATCTCACGGTTCTCTTTTCTCACAGCATTCCTTCAGAGGCAGAGAGGATTACATTGATCACTTCAGTGGAGGTGTCTGGTGAGTGATGAGACATGGGTGATAGTGAGTGACAGGAATCCAGCAGCCAGAGCCTGTGCAGGGCAGCAACCCATCCATCCTCTCCACAGGCAGAAGTCTGGTGACCTTCAAACAACTGGAGTAGCACAGAGAAACAGTGAATGATAACACTCTTCCTGGAGGATGCTGTCGGTGAGTAATGATGGACAGACACTTCATTACACTGGACATTTTCACATAAGTATGGGTGGTGATTCAATTGTCTTATTTAAAATAATGCACTGAGAATTCACTTAGAAGGTATTGCATGCATTCTTTCCGCTTTCAAAACTGTAAACTGTTCAATTGTGTATCTTAAAGAAAGAATGTTCATGCAAATAGTCTTTCATGCATCTCTTTCTTATATACTTGCTCTAGTCTATAATCTTTATAAAAGCAGTAATTCCGTCATAAAAGTGAATCTGTTTGTGTCTATCAGTAGCAACATGCAGGAGCAGGAAAAGTGTGTCAGTGAGTGTCGTTCAGTGTGCCAGAGGTACAGAGAAACCCTGGGTGCTGGTCTGTCTCATGATCAGGTATTTATAGCAGGGGAGGTATAAATAGCCCCAGAATGGAGAaaaacagatcccctttaaaccACGAAGGACGCCATAGCCACATTACAGCCTGATTACGAAAGCTGGAGAGATCCCCACTAGAGAGACTGCAAGAGGCCTGGACATGCACTTTGACGAACTAGGATATGAAGGGGACGACTATGAGGATGTGGACACTCAATACATGATTGAACAGAGTCTTCTGGAATGTAACAAGCAGAATGAATCGCAGGATTCCAGCCTAGGGGATGAGTGCAGTCAAGATATAACAGATAATGTAAAAATCTTCTCCGCCATCCGAAAAGGTGACGAAGCAGCTCTCCGCCAGCTGTCTGTCAGCCAGAGCGCTTTCTCTGAAGTGGACAACAGAGGCTGGATCCCCCTACATGAGGCCGTTAGTCAGAAGAACCAAAATATTCTAGAGGTCACCTTTGCAGCGTCGAGTCAAGATACAGTGCAATGTCGGACCGACCGGGGAAAGACACCTCTGTTCCTGGCGGTGGAGCGGGGTCTGATAGAGAACGCCACCTTTCTGCTACAGAATCATTCCAGTTCTGACTGCCAGGATGACGAAGAGGACTCACCGCTAGTTATAGCTATCAGAAACGATCGTCTGGACCTGGCCAAGCTCCTACTGGGGTTCGGTAGCAATGTGAACCTGGAGGGATGTCACAGCAGGACCCCCCTCCACGAGGCTGCCAAGCTGGGACGGGAGGACTTTGTGGAGCTGCTTCTCAGGTCTGGGGCCGACCCAGACGCCAGGTCCGACTATGGGCTCACGCCCCTGGCCCTTGCTGCTCAGTGTGGGCATGTGAAGGTAGTCCAAGCCCTCGTCCAGAAAGGGGCCAACGTGGAGTCTATGGCCCAGGATTATGCCACAATCCTATTTGAGGCATCTGCCTCTGGCAACCCTGAGATTATCTCTCTGCTGTTGGAGTATGGAGCTGATGCCAATGTCCCCAAACACACCGGACACCTCCCCATCCACAGAGTCTCCCACAGGGGCCATTTACAAGCTCTGAAGATCCTGATCCCTGTGACAACCTGTGACGCAGTATATGAGAGTGGAATGAGCCCCTTACACTCTGCAGCTGCTGGTGGTCACACACAGTGTCTAAAGGCCCTGCTGAAGGCAGGCTATGACCCCAACTACATGTTGCACCCCTGGGTCCGACGTAACTACGACGACCAGCGGAAGTCTGCCCTGTACTTTGCGGTGTCCAACGATGATGTCCCCTCGGTCAAGCTGCTGCTGGAGGCTGGGGCCATGCCCAACCAGGACCCTGTCAAGTGCCTACAGGTGGCTCTGAGGTCGGGTAACCTGGAGATGATCTACGTCCTGCTGAGGTTCGGAGCCAACGTCAACTACTTCTCCCGCATCAATACCACCCACTTCCCCTCCGCGCTGCAGTACGCCTTGAAGGACGAGGTTGTCCTGCGCATGCTTTGTAACTATGGCTACGATGTCCAGCGCTGCTTCGAGTGCAACTACGGTGAAGCGCCCCATGTTCCTGATGACTATGAGGGCTGGACAAATTCTGTCATCAACGACTCCATGTTTTGCGAGGTTATCTCAGTGTACTGGTTGAAAGAACACTCGGGACACGTGGTGCGTATCATGATGGATTACGTCGATCACGTGACCTTCTGCTCGAAACTAAAGGCTGTTCTGATGGAACAAAAGCAGTGGCCTGATATCTGCAAAGTTCAAGAGAACGCTCGCTGTCTTCAGCATCTCTGTCGTCTGAAGATCCGGAGCTGTCTGGGCCGACTGCGTCTCAGGGCCCCAGTGTTCAGGCATTTCCTGCCTCTACCCAACCGGCTCAAAGATTACATCCTGTACCGGGAATATGATCTCTTCAGCCAGAAGATCCTAGTGGGCTGACTGGAAGAAGTACATGGAGGATGAGCGAAG
>XM_021570055.2
gtgcATTTTGATATTATGTTGCAGAGATGGGCAACTCTGGTGGTCCTCGAAGTGTTGTTTTTGTTCCTTTTCCAAATCGCCAtgtgatttagacctgggataccaggtgtagtgtgtgtgtgtgtgcgtgccattGAAAGAATCAGCTGACATTCTGGCCCCAGAGGACTGAAGTTGCCCATCCTGGTTCCTGATCTGAGGGTCTTCTCTGTTTCACTTCTACATTACCAGGTTGATAATTAGAATAACAACTCAAGCGATTTCTTTTTTATAAAGTTAATGTCCTCAAGATGTGAGTATGTGTTAGCGTGTGATCCTGCCAGCAGAGCGTCTGGTGCCGATGTGTTCAGCTCTACCCAAGCTGTCTGTTCTGGCAATTACATCTTCACCTGTTCCATTTGGTGTTTTATTTATAGCTTGTTTGAGGGATTGTAATGGTTTGACATTGGGTGTCTTGATTGGTCGTAGAGTAGATGCATTTCATCTTCAGTCAAGTTTTGCGCCTCTTGACATGCCACTTGTACCCCTCCAGTAATGAAGAGGACTTATTTCATGCCGTGGCATCATCTGGAACTAACGGGCATGAATGTCAGACAGCTGCCAATAAgaggcaatgttttttttttttctcaaccaTGATTGGTGTATCTCATTTCCTCACACACTTGCCCAAATTTAGCCACACCTGTTGATGTACAATTTACAGTCCTTTTTAACCGGTATAAAAGCTGTCCAACAGATTGTGTGATCCTTGTTTTGGTGTGACATAGTGATTGATTTCGAAGGTGGGAGCATAGATTGCATTGGCCGGAGCCTTTGTTATTAAAACAATTTTAGTCTTGAGCTCGAAGGACCGGACCTTTGAATATGGCAAGAAGTATCTTAGGACATTTTACACAACGATACTAATCCCCTCTTCCAGAATGTAATATCCTTTCATCCCAATTATTAATAGGATTACATTTTGATGTTTGTGATGCAATGTGCAACAGTCTAGACATATTGAGACATGCAGTGTTAACCTGAATGACAAATGATTTGGTGTTGGGGTGGAAGAGGATTTGCTGCAGATTATGAAAGTGACATGTTTGGGAATAATAGAAAGGATATGAAATGGACAGTTTGAATAGAAAAGATCACGTGGACTGGTCGCCAGCTGCTGCTGAAATTATAATTCAGTGGTGAAATTCTTTCAGTTCGTTTAGTACTTTGTCACAGACGGAAAACATGCTGTCAGATCATTCTTATGTTGTGAGAATAATCTGTACTTTCCCTAATCCTttttgtactgaacaaaaatataaatgcaaggTGACATTTTCaacgattttacagagttacagttcatataaattGTCATATTTTGTGTAAATCATTCCAGAGCTTTAAATCATTATTTGTAGCATGTGGCAAATACAACTGGTGTCGACTTTATCGTGAAATGCTTgtttacgagcccttcccaacaatgcagagtttaaaaagaaaatagtaacacacgaggaataaaataaaagacacaagaatggagctatatacagaaagTACCAGTACATCCACTTAGCCTAACTTCCTGTAAGGTTATCAGGTTCAATAAGAGAGATTGTGGTTGTTGCCAAGAGTGATCTCACGGTTCTCTTTTCTCACAGCATTCCTTCAGAGGCAGAGAGGATTACATTGATCACTTCAGTGGAGGTGTCTGGTGAGTGATGAGACATGGGTGATAGTGAGTGACAGGAATCCAGCAGCCAGAGCCTGTGCAGGGCAGCAACCCATCCATCCTCTCCACAGGCAGAAGTCTGGTGACCTTCAAACAACTGGAGTAGCACAGAGAAACAGTGAATGATAACACTCTTCCTGGAGGATGCTGTCGGTGAGTAATGATGGACAGACACTTCATTACACTGGACATTTTCACATAAGTATGGGTGGTGATTCAATTGTCTTATTTAAAATAATGCACTGAGAATTCACTTAGAAGGTATTGCATGCATTCTTTCCGCTTTCAAAACTGTAAACTGTTCAATTGTGTATCTTAAAGAAAGAATGTTCATGCAAATAGTCTTTCATGCATCTCTTTCTTATATACTTGCTCTAGTCTATAATCTTTATAAAAGCAGTAATTCCGTCATAAAAGTGAATCTGTTTGTGTCTATCAGTAGCAACATGCAGGAGCAGGAAAAGTGTGTCAGTGAGTGTCGTTCAGTGTGCCAGAGGTACAGAGAAACCCTGGGTGCTGGTCTGTCTCATGATCAGGTATTTATAGCAGGGGAGGTATAAATAGCCCCAGAATGGAGAaaaacagatcccctttaaaccACGAAGGACGCCATAGCCACATTACAGCCTGATTACGAAAGCTGGAGAGATCCCCACTAGAGAGACTGCAAGAGGCCTGGACATGCACTTTGACGAACTAGGATATGAAGGGGACGACTATGAGGATGTGGACACTCAATACATGATTGAACAGAGTCTTCTGGAATGTAACAAGCAGAATGAATCGCAGGATTCCAGCCTAGGGGATGAGTGCAGTCAAGATATAACAGATAATGTAAAAATCTTCTCCGCCATCCGAAAAGGTGACGAAGCAGCTCTCCGCCAGCTGTCTGTCAGCCAGAGCGCTTTCTCTGAAGTGGACAACAGAGGCTGGATCCCCCTACATGAGGCCGTTAGTCAGAAGAACCAAAATATTCTAGAGGTCACCTTTGCAGCGTCGAGTCAAGATACAGTGCAATGTCGGACCGACCGGGGAAAGACACCTCTGTTCCTGGCGGTGGAGCGGGGTCTGATAGAGAACGCCACCTTTCTGCTACAGAATCATTCCAGTTCTGACTGCCAGGATGACGAAGAGGACTCACCGCTAGTTATAGCTATCAGAAACGATCGTCTGGACCTGGCCAAGCTCCTACTGGGGTTCGGTAGCAATGTGAACCTGGAGGGATGTCACAGCAGGACCCCCCTCCACGAGGCTGCCAAGCTGGGACGGGAGGACTTTGTGGAGCTGCTTCTCAGGTCTGGGGCCGACCCAGACGCCAGGTCCGACTATGGGCTCACGCCCCTGGCCCTTGCTGCTCAGTGTGGGCATGTGAAGGTAGTCCAAGCCCTCGTCCAGAAAGCAGGGGCCAACGTGGAGTCTATGGCCCAGGATTATGCCACAATCCTATTTGAGGCATCTGCCTCTGGCAACCCTGAGATTATCTCTCTGCTGTTGGAGTATGGAGCTGATGCCAATGTCCCCAAACACACCGGACACCTCCCCATCCACAGAGTCTCCCACAGGGGCCATTTACAAGCTCTGAAGATCCTGATCCCTGTGACAACCTGTGACGCAGTATATGAGAGTGGAATGAGCCCCTTACACTCTGCAGCTGCTGGTGGTCACACACAGTGTCTAAAGGCCCTGCTGAAGGCAGGCTATGACCCCAACTACATGTTGCACCCCTGGGTCCGACGTAACTACGACGACCAGCGGAAGTCTGCCCTGTACTTTGCGGTGTCCAACGATGATGTCCCCTCGGTCAAGCTGCTGCTGGAGGCTGGGGCCATGCCCAACCAGGACCCTGTCAAGTGCCTACAGGTGGCTCTGAGGTCGGGTAACCTGGAGATGATCTACGTCCTGCTGAGGTTCGGAGCCAACGTCAACTACTTCTCCCGCATCAATACCACCCACTTCCCCTCCGCGCTGCAGTACGCCTTGAAGGACGAGGTTGTCCTGCGCATGCTTTGTAACTATGGCTACGATGTCCAGCGCTGCTTCGAGTGCAACTACGGTGAAGCGCCCCATGTTCCTGATGACTATGAGGGCTGGACAAATTCTGTCATCAACGACTCCATGTTTTGCGAGGTTATCTCAGTGTACTGGTTGAAAGAACACTCGGGACACGTGGTGCGTATCATGATGGATTACGTCGATCACGTGACCTTCTGCTCGAAACTAAAGGCTGTTCTGATGGAACAAAAGCAGTGGCCTGATATCTGCAAAGTTCAAGAGAACGCTCGCTGTCTTCAGCATCTCTGTCGTCTGAAGATCCGGAGCTGTCTGGGCCGACTGCGTCTCAGGGCCCCAGTGTTCAGGCATTTCCTGCCTCTACCCAACCGGCTCAAAGATTACATCCTGTACCGGGAATATGATCTCTTCAGCCAGAAGATCCTAGTGGGCTGACTGGAAGAAGTACATGGAGGATGAGCGAAGAAGATAGGCCTACATTAACAATTAGTCAGTGACTCAGCAATGCTATTAGTCAGTTTTTTTACTCTCAGAGGTGCCGTCTCTTAGGGCCAGGGTGCCCGACGTCGAAATCTTGTGAGTATTTTTTGGAGGAAGGGGGGCACATCGAGGCTGATTTGTTCATTGTGGCTATAGCCCCCTAGCTCTACTGTAATTCAAACCTTGCTATTAGTCTGTCAGGCAGACGAGCTGAGCTCACTCACATCAGGTTAAAAGAGTTTACTGTTATCATCAAGAGGAATTTGTTACTTTTCACCTAAAAAATGAGGGTGGGGCAGGGGGGGATTGAAGAATTTTGGTCTGTTTCAGCATAAAATAAAacctttctctttttttt
>TU1712334
TCTGGCAATTACATCTTCACCTGTTCCATTTGGTGTTTTATTTATAGCTTGTTTGAGGGATTGTAATGGTTTGACATTGGGTGTCTTGATTGGTCGTAGAGTAGATGCATTTCATCTTCAGTCAAGTTTTGCGCCTCTTGACATGCCACTTGTACCCCTCCAGTAATGAAGAGGACTTATTTCATGCCGTGGCATCATCTGGAACTAACGGGCATGAATGTCAGACAGCTGCCAATAAgaggcaatgttttttttttttctcaaccaTGATTGGTGTATCTCATTTCCTCACACACTTGCCCAAATTTAGCCACACCTGTTGATGTACAATTTACAGTCCTTTTTAACCGGTATAAAAGCTGTCCAACAGATTGTGTGATCCTTGTTTTGGTGTGACATAGTGATTGATTTCGAAGGTGGGAGCATAGATTGCATTGGCCGGAGCCTTTGTTATTAAAACAATTTTAGTCTTGAGCTCGAAGGACCGGACCTTTGAATATGGCAAGAAGTATCTTA

Function

symbol description
asb14 Predicted to be involved in intracellular signal transduction and protein ubiquitination. Predicted to be located in cytosol.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570056.2 False 4192 mRNA 0.46 11 83562178 83574811
XM_021570055.2 False 4568 mRNA 0.46 11 83562178 83575184
TU1712334 True 516 lncRNA 0.41 1 83562547 83563062

Neighbor

gene id symbol gene type direction distance location
LOC110494734 LOC106566095 coding upstream 24 83560011 ~ 83562154 (+)
trnae-uuc-57 NA coding upstream 37977 83524130 ~ 83524201 (+)
trnar-acg-55 NA coding upstream 38259 83523847 ~ 83523919 (+)
trnae-uuc-56 NA coding upstream 38650 83523457 ~ 83523528 (+)
trnar-acg-54 NA coding upstream 38927 83523179 ~ 83523251 (+)
LOC110494736 appl1 coding downstream 843 83576027 ~ 83592619 (+)
hesx1 LOC106582615 coding downstream 17578 83592762 ~ 83595541 (+)
irak1bp1 irak1bp1 coding downstream 28455 83603639 ~ 83608888 (+)
LOC110494740 LOC106566091 coding downstream 54004 83629188 ~ 83630857 (+)
LOC110494741 il17rd coding downstream 67261 83642445 ~ 83701923 (+)
G1497947 NA non-coding upstream 33356 83528602 ~ 83528822 (+)
G1497916 NA non-coding upstream 43223 83511112 ~ 83518955 (+)
G1497938 NA non-coding upstream 91410 83459338 ~ 83470768 (+)
G1497934 NA non-coding upstream 101336 83452852 ~ 83460842 (+)
G1497906 NA non-coding upstream 130056 83431862 ~ 83432122 (+)
G1497974 NA non-coding downstream 30474 83605658 ~ 83605866 (+)
G1497977 NA non-coding downstream 32540 83607724 ~ 83608208 (+)
G1497978 NA non-coding downstream 43672 83618856 ~ 83622608 (+)
G1498007 NA non-coding downstream 112482 83687666 ~ 83689358 (+)
G1496351 LOC106566032 other upstream 1392428 82163138 ~ 82169750 (+)
LOC110494698 LOC106566043 other upstream 1729077 81828571 ~ 81847540 (+)
LOC110494696 LOC106582736 other upstream 1960021 81432188 ~ 81602161 (+)
G1495362 NA other upstream 2224015 81337017 ~ 81338163 (+)
G1495346 NA other upstream 2268252 81293440 ~ 81293926 (+)
G1497918 NA other downstream 39081 83614265 ~ 83634495 (+)
LOC110494749 LOC106566083 other downstream 304748 83879805 ~ 83890067 (+)
G1498583 NA other downstream 550653 84125837 ~ 84174177 (+)
G1498913 NA other downstream 920745 84495929 ~ 84497398 (+)
G1498912 NA other downstream 940933 84516117 ~ 84567678 (+)

Expression


Co-expression Network