Item | Value |
---|---|
gene id | ccdc66 |
gene name | LOC106566088 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 83837851 ~ 83860046 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021570068.2 | False | 4371 | mRNA | 0.50 | 19 | 83837851 | 83849174 |
XM_021570069.2 | False | 4369 | mRNA | 0.50 | 19 | 83837851 | 83849175 |
XM_021570071.2 | False | 4356 | mRNA | 0.50 | 19 | 83837851 | 83849176 |
XM_036950794.1 | False | 4265 | mRNA | 0.50 | 18 | 83837851 | 83849176 |
XM_021570070.2 | False | 4133 | mRNA | 0.51 | 19 | 83837851 | 83852057 |
TU1712881 | True | 2543 | lncRNA | 0.46 | 4 | 83851273 | 83860046 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:dkey-261l7.2 | LOC106566092 | coding | downstream | 208787 | 83608842 ~ 83629064 (-) |
LOC110494733 | LOC106566096 | coding | downstream | 284131 | 83532512 ~ 83553720 (-) |
LOC110494731 | LOC106566009 | coding | downstream | 429136 | 83397640 ~ 83408715 (-) |
LOC110494730 | LOC106566007 | coding | downstream | 442969 | 83388660 ~ 83394882 (-) |
LOC110494732 | LOC106566008 | coding | downstream | 450520 | 83385666 ~ 83387331 (-) |
LOC110494754 | LOC106566081 | coding | upstream | 180308 | 84032365 ~ 84046538 (-) |
LOC110493281 | LOC106593201 | coding | upstream | 838728 | 84690785 ~ 84713397 (-) |
LOC110494760 | ca119 | coding | upstream | 874453 | 84724945 ~ 84730729 (-) |
slc32a1 | LOC106566112 | coding | upstream | 1029931 | 84881988 ~ 84887491 (-) |
LOC110494769 | LOC106566115 | coding | upstream | 1098463 | 84950520 ~ 84995003 (-) |
G1498364 | NA | non-coding | downstream | 8971 | 83828674 ~ 83828880 (-) |
G1498363 | LOC106566086 | non-coding | downstream | 9999 | 83827560 ~ 83827852 (-) |
G1498341 | NA | non-coding | downstream | 28551 | 83807498 ~ 83809300 (-) |
G1498339 | NA | non-coding | downstream | 33722 | 83803876 ~ 83804129 (-) |
G1498330 | NA | non-coding | downstream | 51215 | 83785130 ~ 83786636 (-) |
G1498397 | NA | non-coding | upstream | 67351 | 83919408 ~ 83919756 (-) |
G1498404 | NA | non-coding | upstream | 86007 | 83938064 ~ 83938373 (-) |
G1498407 | NA | non-coding | upstream | 92037 | 83944094 ~ 83944311 (-) |
G1498415 | NA | non-coding | upstream | 101155 | 83953212 ~ 83953427 (-) |
G1498419 | NA | non-coding | upstream | 104493 | 83956550 ~ 83956836 (-) |
G1498077 | NA | other | downstream | 232098 | 83605243 ~ 83605753 (-) |
G1496921 | NA | other | downstream | 1176213 | 82629246 ~ 82661638 (-) |
G1496689 | NA | other | downstream | 1591864 | 82235128 ~ 82245987 (-) |
G1496390 | NA | other | downstream | 1662999 | 82172469 ~ 82174852 (-) |
G1495552 | NA | other | downstream | 2510738 | 81326685 ~ 81327113 (-) |
G1498442 | NA | other | upstream | 130284 | 83982341 ~ 83982894 (-) |
G1498522 | NA | other | upstream | 198953 | 84051010 ~ 84057392 (-) |
G1499671 | NA | other | upstream | 1369068 | 85221125 ~ 85223119 (-) |
G1499684 | NA | other | upstream | 1434599 | 85251788 ~ 85288117 (-) |
LOC110494779 | ddit3 | other | upstream | 2387661 | 86236554 ~ 86242991 (-) |