LOC110494754 (LOC106566081)


Basic Information

Item Value
gene id LOC110494754
gene name LOC106566081
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 84032365 ~ 84046538 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950803.1
GGAATTTGTTTTTCAATGCTCGGTTTGGTTGGATCCTCTCCAGAACCGAAGTTCGTCAGTAAGACTGGAGAGAATCACCTGACGTGTTTTGCAGATGACGGGTTTGACCCAGTTGTAATAGCTGATAAACTGAGGGAACTTGGAGATGATTTTGAAGTTAAGTTTATCCAGCCTCATATCAGAAAACTCCAACAAGCAGTTGCAGACAAGgcgGTGGAGGAGTTTGCGCGTACCGTGGACAGCCTGTGTGCGGCCCAGAGAACAGAGGTGGCCCCTGAGATGCAGCTGCTGAGGGCCTCCATGGCCCTGGGTCTGTACGTTAAGAAGACCTGTCCTGACCTTAGAGCCACCATCCAGTCTTGTATGACTGCCTTCATTAACAcccggctggctggctggatcaCCCAGCAGGGAGGATGGGATCAAGTTACTATGGTTTAAAAACATGGAGAAGATGTCATCCACATCATTTTTGTCTTAATGAGGAGGAGGTCTTAACTCCTCAAGTCTGTATATGTGTTAAgtcttccctctttctttttctttcttccctcctttcttccctctttctttcttccctctttctttcttccctctttctttctttctttctttctttctttctttctttcttccctccTTTCTTTCCTCTTTCTTTCATCTGTCTTATGTTCCTATCATGGCCATTTTGAACTTGCCAGTTGTATTCCCTCTTCACTTCCCCTAAGTTGGTTCTTTGAGGAAGAGACTGCGTCCCACTATCAACAGAATGTGACGTCTCCACTGACTTTTTGACCGTCCTCTCCTTGTTATAAGCAATGGGCACCTGCATCTGAAGTAACGTTGCACATTGGAATCATGACGTATTGCAATCCATGGCATTTTCTACATCACATTGTCAAAACAAGCAATATATTTTTGTAGAAAAACAATCCGATGCAATGTTTTGTGCTTTTGAAGCCCTTTCCTAAACAATAGAGGCAGGTTACCAGATGATCACAACAAGCTTTCATTTTTACGCCGATGGACCGTCTTTCATTTAATGTGAGAATGAACTTTGACCTAATAACATGACTCACAATAAAAGTCCATGTAATCGCCGAAGCTGTGATGTTGAATACTTGAAAATGAACCGTCACTGAGTCGTGCATCGCTTGATGGAACCTGAAATGCTTTACGTTTTGTTTGACCATGTTTTCTAATATGCTCTTATCCTCAATCACTCCGTGCTTGTTAAACATGCTTATTGTTAGCTCTACTCAACAAATCAATGTGCGACTTTGTTAAATGTGTGTGTTGCTGGTGTTAGCTCATCTTGATTTGAGTAAAAGGAAAAAGTCTTTAATATGATATGCGTTAAGAAAACGAATTAGTGTTAACCAACTGTGAGTTAAGAGTTATTTATAGTTTTGTAGACTTCCTCAGAGCTTGTAGAGGGAAACTACAGTAGGAAAGTGCCTCTGGTCAAAGTCAGTATTGTTTCAATGTCAGCTCTGACTCATACCATTTACAGTCACTTCACCTTTATTAAAGATGCACAGAACCATCATGTGGAAATGGACCAAAGGGAATTACAAAGTAGATAAGGTtttattgtaatttttttttcaattgtacATTTGTGCCTATTTGTGTGTAATTCTGTCTGGTTTTAATAAAACATGGAGCTTTGTTGTGAAGTCTCACGGCCTTGCCTCTGTTCTGGTGTGATAATGAA
>XM_036950802.1
tgactgatatACAAATAGTAATGAGTAGTTATTTCTGATggaaggtgatttgtagatcagttaTTCGGCTGCACTGTCGAGCAAGCCCATATCTCCGGTTGATGAGATCTAGGCGTGCCGCATTTACTCGTCTAGTCACGATTGAGGAACCGTCGACATAAATTATCTGTCTTCCGTTTCACGGACGCTGTTGAAGGTGTTTAACTATGTCTCCAAGAGATATAGAACAACAGACATTTGATATTATTAGGTGCTTCTTTGAAGAGGAGCAGAACCCAGTATGTAATCGGAAGGTGTACGGAGGAATTGAGTCTGATGGACCTGGCGATGATCACCTGACGTGTTTTGCAGATGACGGGTTTGACCCAGTTGTAATAGCTGATAAACTGAGGGAACTTGGAGATGATTTTGAAGTTAAGTTTATCCAGCCTCATATCAGAAAACTCCAACAAGCAGTTGCAGACAAGgcgGTGGAGGAGTTTGCGCGTACCGTGGACAGCCTGTGTGCGGCCCAGAGAACAGAGGTGGCCCCTGAGATGCAGCTGCTGAGGGCCTCCATGGCCCTGGGTCTGTACGTTAAGAAGACCTGTCCTGACCTTAGAGCCACCATCCAGTCTTGTATGACTGCCTTCATTAACAcccggctggctggctggatcaCCCAGCAGGGAGGATGGGATCAAGTTACTATGGTTTAAAAACATGGAGAAGATGTCATCCACATCATTTTTGTCTTAATGAGGAGGAGGTCTTAACTCCTCAAGTCTGTATATGTGTTAAgtcttccctctttctttttctttcttccctcctttcttccctctttctttcttccctctttctttcttccctctttctttctttctttctttctttctttctttctttcttccctccTTTCTTTCCTCTTTCTTTCATCTGTCTTATGTTCCTATCATGGCCATTTTGAACTTGCCAGTTGTATTCCCTCTTCACTTCCCCTAAGTTGGTTCTTTGAGGAAGAGACTGCGTCCCACTATCAACAGAATGTGACGTCTCCACTGACTTTTTGACCGTCCTCTCCTTGTTATAAGCAATGGGCACCTGCATCTGAAGTAACGTTGCACATTGGAATCATGACGTATTGCAATCCATGGCATTTTCTACATCACATTGTCAAAACAAGCAATATATTTTTGTAGAAAAACAATCCGATGCAATGTTTTGTGCTTTTGAAGCCCTTTCCTAAACAATAGAGGCAGGTTACCAGATGATCACAACAAGCTTTCATTTTTACGCCGATGGACCGTCTTTCATTTAATGTGAGAATGAACTTTGACCTAATAACATGACTCACAATAAAAGTCCATGTAATCGCCGAAGCTGTGATGTTGAATACTTGAAAATGAACCGTCACTGAGTCGTGCATCGCTTGATGGAACCTGAAATGCTTTACGTTTTGTTTGACCATGTTTTCTAATATGCTCTTATCCTCAATCACTCCGTGCTTGTTAAACATGCTTATTGTTAGCTCTACTCAACAAATCAATGTGCGACTTTGTTAAATGTGTGTGTTGCTGGTGTTAGCTCATCTTGATTTGAGTAAAAGGAAAAAGTCTTTAATATGATATGCGTTAAGAAAACGAATTAGTGTTAACCAACTGTGAGTTAAGAGTTATTTATAGTTTTGTAGACTTCCTCAGAGCTTGTAGAGGGAAACTACAGTAGGAAAGTGCCTCTGGTCAAAGTCAGTATTGTTTCAATGTCAGCTCTGACTCATACCATTTACAGTCACTTCACCTTTATTAAAGATGCACAGAACCATCATGTGGAAATGGACCAAAGGGAATTACAAAGTAGATAAGGTtttattgtaatttttttttcaattgtacATTTGTGCCTATTTGTGTGTAATTCTGTCTGGTTTTAATAAAACATGGAGCTTTGTTGTGAAGTCTCACGGCCTTGCCTCTGTTCTGGTGTGATAATGAA
>XM_021570084.2
CAAAGAAGATCACAACCGTaatgtatcatgggtaaattgtgactgactgatatACAAATAGTAATGAGTAGTTATTTCTGATggaaggtgatttgtagatcagttaTTCGGCTGCACTGTCGAGCAAGCCCATATCTCCGGTTGATGAGATCTAGGCGTGCCGCATTTACTCGTCTAGTCACGATTGAGGAACCGTCGACATAAATTATCTGTCTTCCGTTTCACGGACGCTGTTGAAGGTGTTTAACTATGTCTCCAAGAGATATAGAACAACAGACATTTGATATTATTAGGTGCTTCTTTGAAGAGGAGCAGAACCCAGTATGTAATCGGAAGGTGTACGGAGGAATTGAGTCTGATGGACCTGGCGATGATGACGGGTTTGACCCAGTTGTAATAGCTGATAAACTGAGGGAACTTGGAGATGATTTTGAAGTTAAGTTTATCCAGCCTCATATCAGAAAACTCCAACAAGCAGTTGCAGACAAGgcgGTGGAGGAGTTTGCGCGTACCGTGGACAGCCTGTGTGCGGCCCAGAGAACAGAGGTGGCCCCTGAGATGCAGCTGCTGAGGGCCTCCATGGCCCTGGGTCTGTACGTTAAGAAGACCTGTCCTGACCTTAGAGCCACCATCCAGTCTTGTATGACTGCCTTCATTAACAcccggctggctggctggatcaCCCAGCAGGGAGGATGGGATCAAGTTACTATGGTTTAAAAACATGGAGAAGATGTCATCCACATCATTTTTGTCTTAATGAGGAGGAGGTCTTAACTCCTCAAGTCTGTATATGTGTTAAgtcttccctctttctttttctttcttccctcctttcttccctctttctttcttccctctttctttcttccctctttctttctttctttctttctttctttctttctttcttccctccTTTCTTTCCTCTTTCTTTCATCTGTCTTATGTTCCTATCATGGCCATTTTGAACTTGCCAGTTGTATTCCCTCTTCACTTCCCCTAAGTTGGTTCTTTGAGGAAGAGACTGCGTCCCACTATCAACAGAATGTGACGTCTCCACTGACTTTTTGACCGTCCTCTCCTTGTTATAAGCAATGGGCACCTGCATCTGAAGTAACGTTGCACATTGGAATCATGACGTATTGCAATCCATGGCATTTTCTACATCACATTGTCAAAACAAGCAATATATTTTTGTAGAAAAACAATCCGATGCAATGTTTTGTGCTTTTGAAGCCCTTTCCTAAACAATAGAGGCAGGTTACCAGATGATCACAACAAGCTTTCATTTTTACGCCGATGGACCGTCTTTCATTTAATGTGAGAATGAACTTTGACCTAATAACATGACTCACAATAAAAGTCCATGTAATCGCCGAAGCTGTGATGTTGAATACTTGAAAATGAACCGTCACTGAGTCGTGCATCGCTTGATGGAACCTGAAATGCTTTACGTTTTGTTTGACCATGTTTTCTAATATGCTCTTATCCTCAATCACTCCGTGCTTGTTAAACATGCTTATTGTTAGCTCTACTCAACAAATCAATGTGCGACTTTGTTAAATGTGTGTGTTGCTGGTGTTAGCTCATCTTGATTTGAGTAAAAGGAAAAAGTCTTTAATATGATATGCGTTAAGAAAACGAATTAGTGTTAACCAACTGTGAGTTAAGAGTTATTTATAGTTTTGTAGACTTCCTCAGAGCTTGTAGAGGGAAACTACAGTAGGAAAGTGCCTCTGGTCAAAGTCAGTATTGTTTCAATGTCAGCTCTGACTCATACCATTTACAGTCACTTCACCTTTATTAAAGATGCACAGAACCATCATGTGGAAATGGACCAAAGGGAATTACAAAGTAGATAAGGTtttattgtaatttttttttcaattgtacATTTGTGCCTATTTGTGTGTAATTCTGTCTGGTTTTAATAAAACATGGAGCTTTGTTGTGAAGTCTCACGGCCTTGCCTCTGTTCTGGTGTGATAATGAA

Function

NR:

description
bcl-2-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950803.1 False 1717 mRNA 0.41 4 84032365 84046060
XM_036950802.1 False 1974 mRNA 0.41 4 84032365 84046495
XM_021570084.2 True 1996 mRNA 0.41 4 84032365 84046538

Neighbor

gene id symbol gene type direction distance location
ccdc66 LOC106566088 coding downstream 180308 83837851 ~ 83860046 (-)
si:dkey-261l7.2 LOC106566092 coding downstream 403301 83608842 ~ 83629064 (-)
LOC110494733 LOC106566096 coding downstream 478645 83532512 ~ 83553720 (-)
LOC110494731 LOC106566009 coding downstream 623650 83397640 ~ 83408715 (-)
LOC110494730 LOC106566007 coding downstream 637483 83388660 ~ 83394882 (-)
LOC110493281 LOC106593201 coding upstream 644247 84690785 ~ 84713397 (-)
LOC110494760 ca119 coding upstream 679972 84724945 ~ 84730729 (-)
slc32a1 LOC106566112 coding upstream 835450 84881988 ~ 84887491 (-)
LOC110494769 LOC106566115 coding upstream 903982 84950520 ~ 84995003 (-)
LOC118940503 NA coding upstream 1144259 85190797 ~ 85204675 (-)
G1498470 NA non-coding downstream 28731 84003405 ~ 84003634 (-)
G1498463 NA non-coding downstream 34744 83997376 ~ 83997621 (-)
G1498421 NA non-coding downstream 73933 83958165 ~ 83958432 (-)
G1498419 NA non-coding downstream 75529 83956550 ~ 83956836 (-)
G1498415 NA non-coding downstream 78938 83953212 ~ 83953427 (-)
G1498541 NA non-coding upstream 20580 84067118 ~ 84067470 (-)
G1498543 NA non-coding upstream 21344 84067882 ~ 84068289 (-)
G1498547 NA non-coding upstream 22855 84069393 ~ 84069609 (-)
G1498551 NA non-coding upstream 25376 84071914 ~ 84072259 (-)
G1498554 NA non-coding upstream 27996 84074534 ~ 84074752 (-)
G1498442 NA other downstream 49471 83982341 ~ 83982894 (-)
G1498077 NA other downstream 426612 83605243 ~ 83605753 (-)
G1496921 NA other downstream 1370727 82629246 ~ 82661638 (-)
G1496689 NA other downstream 1786378 82235128 ~ 82245987 (-)
G1496390 NA other downstream 1857513 82172469 ~ 82174852 (-)
G1498522 NA other upstream 4472 84051010 ~ 84057392 (-)
G1499671 NA other upstream 1174587 85221125 ~ 85223119 (-)
G1499684 NA other upstream 1240118 85251788 ~ 85288117 (-)
LOC110494779 ddit3 other upstream 2193180 86236554 ~ 86242991 (-)
G1500834 LOC106566150 other upstream 2403141 86449679 ~ 86450734 (-)

Expression


Co-expression Network