Item | Value |
---|---|
gene id | LOC110494769 |
gene name | LOC106566115 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048581.1 |
NCBI id | CM023235.2 |
chromosome length | 95212422 |
location | 84950520 ~ 84995003 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: rho GTPase-activating protein 40-like |
id | description |
---|---|
K20639 | ARHGAP18_28_40; Rho GTPase-activating protein 18/28/40 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036950825.1 | False | 3454 | mRNA | 0.52 | 14 | 84950520 | 84974232 |
XM_036950826.1 | False | 3625 | mRNA | 0.52 | 15 | 84950520 | 84979671 |
XM_036950827.1 | True | 3249 | mRNA | 0.52 | 15 | 84950520 | 84995003 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
slc32a1 | LOC106566112 | coding | downstream | 63029 | 84881988 ~ 84887491 (-) |
LOC110494760 | ca119 | coding | downstream | 219791 | 84724945 ~ 84730729 (-) |
LOC110493281 | LOC106593201 | coding | downstream | 237123 | 84690785 ~ 84713397 (-) |
LOC110494754 | LOC106566081 | coding | downstream | 903982 | 84032365 ~ 84046538 (-) |
ccdc66 | LOC106566088 | coding | downstream | 1098463 | 83837851 ~ 83860046 (-) |
LOC118940503 | NA | coding | upstream | 195794 | 85190797 ~ 85204675 (-) |
shmt2 | shmt2 | coding | upstream | 305303 | 85300306 ~ 85342666 (-) |
LOC110487407 | NA | coding | upstream | 321342 | 85316345 ~ 85318853 (-) |
LOC118940505 | NA | coding | upstream | 330150 | 85325153 ~ 85326712 (-) |
LOC110494775 | LOC106566119 | coding | upstream | 349518 | 85344521 ~ 85425394 (-) |
G1499523 | NA | non-coding | downstream | 70564 | 84879690 ~ 84879956 (-) |
G1499518 | NA | non-coding | downstream | 71267 | 84878718 ~ 84879253 (-) |
G1499517 | NA | non-coding | downstream | 79162 | 84871137 ~ 84871358 (-) |
G1499494 | LOC106566109 | non-coding | downstream | 93052 | 84791186 ~ 84857468 (-) |
G1499576 | NA | non-coding | upstream | 16333 | 85011336 ~ 85033259 (-) |
G1499646 | NA | non-coding | upstream | 151884 | 85146887 ~ 85147762 (-) |
G1499661 | NA | non-coding | upstream | 174171 | 85169174 ~ 85169732 (-) |
G1499681 | NA | non-coding | upstream | 221597 | 85216600 ~ 85217234 (-) |
G1499682 | NA | non-coding | upstream | 222306 | 85217309 ~ 85217771 (-) |
G1498522 | NA | other | downstream | 893128 | 84051010 ~ 84057392 (-) |
G1498442 | NA | other | downstream | 967626 | 83982341 ~ 83982894 (-) |
G1498077 | NA | other | downstream | 1344767 | 83605243 ~ 83605753 (-) |
G1496921 | NA | other | downstream | 2288882 | 82629246 ~ 82661638 (-) |
G1496689 | NA | other | downstream | 2704533 | 82235128 ~ 82245987 (-) |
G1499671 | NA | other | upstream | 226122 | 85221125 ~ 85223119 (-) |
G1499684 | NA | other | upstream | 291653 | 85251788 ~ 85288117 (-) |
LOC110494779 | ddit3 | other | upstream | 1244715 | 86236554 ~ 86242991 (-) |
G1500834 | LOC106566150 | other | upstream | 1454676 | 86449679 ~ 86450734 (-) |
LOC110493290 | map3k12 | other | upstream | 1803062 | 86798065 ~ 86880836 (-) |