dctn2 (LOC106566142)


Basic Information

Item Value
gene id dctn2
gene name LOC106566142
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86249232 ~ 86276059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950858.1
CTCGTCCACGCAAATCTCGCGAGATTGTAATGCTCGTCCGCTACTGAACAGTCGAGCTGTCAGAATACAGTTATTAAAATACAAAAGAAGCGCTTTATGTTAGGGAGTTGTTTGGCTACACAGGGTGAAAGGATCCCTTTTTTTGCTTGTTCATTTAGCTAGCGTTTTGAAAACGGACTAATAACTTTTATCCACAAGGTCCATCGTTATTTCAGGTATCTTTGTCACGTCTAAGGGGGTTTTTGTCTACTCATCCACCGGCCTCGTCCTTGTAACCTCAACAATGGCTGATCCCAAATACGCCAATTTACCTGGAATCGCGTCCAACGAGCCAGATGTGTATGAGACCAGTGACCTGCCAGAAGATGATCAGGCCCAGTTTGAGTCGTGTGTACAAGAGCTGGAAGAGCTGTGCAGTGACAGCGTGGAGAGGATCGTGGTCAACCCCAACGCAGCCTACGACAAGTTCAAGGACAAGAGGGTCAGCACTAAAGGCCTCGACTTCTCAGATCGTATCAGTAAGAACAAAAGAGTGGGCTATGAGTCGGGAGAATATGAGATTttGGCGGAGGGCTGTGGGGTGAAGGAAACCCCCCAGCAGAAGTACCAGCGGCTGGTTAATGAGATCCAGGAACTCAGTCAGGAGGTGGAGACCATCCAGGCGACCACACGGGACAGCAGTTCAGAGGAGCGTCTGACTCCTGTCGTCCTCGCTCAGCAGGCTGCCCAGCTCAAACAGCAGCTGGTCTCTGCCCACCTGGACTCACTGCTAGGACCACAGGCACATATTAATTTAGCTGACCCAGATGGAGCACTGGCCAaaCGTCTGTTAACCCAGCTGGAGGCAGTGAGGGGCAGTAGGGGCAGTACAGGGGAGGGGAAGGCCCCAGCAGCTAAAGGTCCTGACGGTGTGGTGTTGTATGAGCTACACAGCCGGCCAGAGCAGGAGAAGTTCACAGACGCTGCCAAGATGGCAGAGTTGGAGAAGAGACTGTCAGAGCTGGAGACTGCTGTGGGTTCTGGATCAGACAAACCGGGACCTCTGAGTGCTGGGGTGCAGGGAGGCAGTCTCATGgacacTATGGAGCTGCTGCAGGCGAGGGTCAGTGCTCTGGACTCAGCCACTCTGGACCAGGTGGAAGCCAGGCTGCAGAGCGTCCTTGGAAAGATGAATGAGATTGCAAAGCACAAAGCAACCATTGAAGATGCTGGCACACAGAACAAgGTGTCTCAGCTGTATGACGTGGTGCAGAAGTGGGACGCCATGGCAACCTCTCTGCCCCAGGTGGTGCAGAGGCTCATGGCTGTCAAGGAGTTGCATGAACAAGccatgCAGTTTGGTCAGCTGCTGACCCACCTGGACACCACCCAGCAGATGATCAACAACTCTCTGAAGGACAACGGGACACTGCTCTCACAGgTTCAGACAACCATGAAGGAGAATCTCTTGTCTGTAGAGGAGAACTTTGCAGCTCTGGACCAGAGAATGAAGACTCTCAACAAATAAATCTGGtttctttattaaaaaaaaaaaaaaacgtctgtCAGGACAGTTGGGCAAATTGAGGGAGTGGAGGatcttatctctctctgtatctcttccACGTCAGCCTTCTTTTTTTTCCTGCAAAGTGGAATGTTTTGATTTGAAagtataaaaaaagaaaaaaccgGACAAAAAAAAGCTCAAATGGCCACCAAATTTTCttgatttatttttctccttttccACATCTCTCCATTTGAAGTCTTTAATTTAGTATCAAATGCAATGCATTACacccacatatatatatatatattatccctTCAAAGCTCGCTGGCTTTTTCGCAATGAAAAATATTTATCCAGATCCTTTCAACCTCTTCATCCACACTAGTTGTAGTTCTGTGCTACAACATTCCGCTAAGTCATTTCATTGAATGTCCCAATTTTGAGGGCTCAAGAAGTGGAATAGCCATGTTGTCTACAACATTACTGCACAAAAACAAACAACCAATGCTGATTTATCCACCCTTTTCCTGAAGTATACACTTTTGCACACTTCCTGTTGTGGATTTAACAACGGTGGAAAAAGTCCCTCCCTCTAATCCTTACACCAATACAATGACGGGAAGTGTGctagtgcacactttgggagaagGGTGAAGAATCGGGACGCGTCGTCAACCAGAAAGACGATGTATGGACATGTagcagtgtgtgttggggggggccTGAAGTCCCGGAGGGATGCTTGTAAATATGCCTGTGTACCTTAAATGTTTCATGCTCAGTTGCTTGTAACTTATTATTATTGTGGCTGAGACTAAAATAC
>XM_036950859.1
CTCGTCCACGCAAATCTCGCGAGATTGTAATGCTCGTCCGCTACTGAACAGTCGAGCTGTCAGAATACAGTTATTAAAATACAAAAGAAGCGCTTTATGTTAGGGAGTTGTTTGGCTACACAGGGTGAAAGGATCCCTTTTTTTGCTTGTTCATTTAGCTAGCGTTTTGAAAACGGACTAATAACTTTTATCCACAAGGTCCATCGTTATTTCAGGTATCTTTGTCACGTCTAAGGGGGTTTTTGTCTACTCATCCACCGGCCTCGTCCTTGTAACCTCAACAATGGCTGATCCCAAATACGCCAATTTACCTGGAATCGCGTCCAACGAGCCAGATGTGTATGAGACCAGTGACCTGCCAGAAGATGATCAGGCCCAGTTTGAGTCGTGTGTACAAGAAGAGCTGTGCAGTGACAGCGTGGAGAGGATCGTGGTCAACCCCAACGCAGCCTACGACAAGTTCAAGGACAAGAGGGTCAGCACTAAAGGCCTCGACTTCTCAGATCGTATCAGTAAGAACAAAAGAGTGGGCTATGAGTCGGGAGAATATGAGATTttGGCGGAGGGCTGTGGGGTGAAGGAAACCCCCCAGCAGAAGTACCAGCGGCTGGTTAATGAGATCCAGGAACTCAGTCAGGAGGTGGAGACCATCCAGGCGACCACACGGGACAGCAGTTCAGAGGAGCGTCTGACTCCTGTCGTCCTCGCTCAGCAGGCTGCCCAGCTCAAACAGCAGCTGGTCTCTGCCCACCTGGACTCACTGCTAGGACCACAGGCACATATTAATTTAGCTGACCCAGATGGAGCACTGGCCAaaCGTCTGTTAACCCAGCTGGAGGCAGTGAGGGGCAGTAGGGGCAGTACAGGGGAGGGGAAGGCCCCAGCAGCTAAAGGTCCTGACGGTGTGGTGTTGTATGAGCTACACAGCCGGCCAGAGCAGGAGAAGTTCACAGACGCTGCCAAGATGGCAGAGTTGGAGAAGAGACTGTCAGAGCTGGAGACTGCTGTGGGTTCTGGATCAGACAAACCGGGACCTCTGAGTGCTGGGGTGCAGGGAGGCAGTCTCATGgacacTATGGAGCTGCTGCAGGCGAGGGTCAGTGCTCTGGACTCAGCCACTCTGGACCAGGTGGAAGCCAGGCTGCAGAGCGTCCTTGGAAAGATGAATGAGATTGCAAAGCACAAAGCAACCATTGAAGATGCTGGCACACAGAACAAgGTGTCTCAGCTGTATGACGTGGTGCAGAAGTGGGACGCCATGGCAACCTCTCTGCCCCAGGTGGTGCAGAGGCTCATGGCTGTCAAGGAGTTGCATGAACAAGccatgCAGTTTGGTCAGCTGCTGACCCACCTGGACACCACCCAGCAGATGATCAACAACTCTCTGAAGGACAACGGGACACTGCTCTCACAGgTTCAGACAACCATGAAGGAGAATCTCTTGTCTGTAGAGGAGAACTTTGCAGCTCTGGACCAGAGAATGAAGACTCTCAACAAATAAATCTGGtttctttattaaaaaaaaaaaaaaacgtctgtCAGGACAGTTGGGCAAATTGAGGGAGTGGAGGatcttatctctctctgtatctcttccACGTCAGCCTTCTTTTTTTTCCTGCAAAGTGGAATGTTTTGATTTGAAagtataaaaaaagaaaaaaccgGACAAAAAAAAGCTCAAATGGCCACCAAATTTTCttgatttatttttctccttttccACATCTCTCCATTTGAAGTCTTTAATTTAGTATCAAATGCAATGCATTACacccacatatatatatatatattatccctTCAAAGCTCGCTGGCTTTTTCGCAATGAAAAATATTTATCCAGATCCTTTCAACCTCTTCATCCACACTAGTTGTAGTTCTGTGCTACAACATTCCGCTAAGTCATTTCATTGAATGTCCCAATTTTGAGGGCTCAAGAAGTGGAATAGCCATGTTGTCTACAACATTACTGCACAAAAACAAACAACCAATGCTGATTTATCCACCCTTTTCCTGAAGTATACACTTTTGCACACTTCCTGTTGTGGATTTAACAACGGTGGAAAAAGTCCCTCCCTCTAATCCTTACACCAATACAATGACGGGAAGTGTGctagtgcacactttgggagaagGGTGAAGAATCGGGACGCGTCGTCAACCAGAAAGACGATGTATGGACATGTagcagtgtgtgttggggggggccTGAAGTCCCGGAGGGATGCTTGTAAATATGCCTGTGTACCTTAAATGTTTCATGCTCAGTTGCTTGTAACTTATTATTATTGTGGCTGAGACTAAAATAC
>XM_036950860.1
CTCGTCCACGCAAATCTCGCGAGATTGTAATGCTCGTCCGCTACTGAACAGTCGAGCTGTCAGAATACAGTTATTAAAATACAAAAGAAGCGCTTTATGTTAGGGAGTTGTTTGGCTACACAGGGTGAAAGGATCCCTTTTTTTGCTTGTTCATTTAGCTAGCGTTTTGAAAACGGACTAATAACTTTTATCCACAAGGTCCATCGTTATTTCAGGTATCTTTGTCACGTCTAAGGGGGTTTTTGTCTACTCATCCACCGGCCTCGTCCTTGTAACCTCAACAATGGCTGATCCCAAATACGCCAATTTACCTGGAATCGCGTCCAACGAGCCAGATGTGTATGAGACCAGTGACCTGCCAGAAGATGATCAGGCCCAGTTTGAGTCGGAGCTGGAAGAGCTGTGCAGTGACAGCGTGGAGAGGATCGTGGTCAACCCCAACGCAGCCTACGACAAGTTCAAGGACAAGAGGGTCAGCACTAAAGGCCTCGACTTCTCAGATCGTATCAGTAAGAACAAAAGAGTGGGCTATGAGTCGGGAGAATATGAGATTttGGCGGAGGGCTGTGGGGTGAAGGAAACCCCCCAGCAGAAGTACCAGCGGCTGGTTAATGAGATCCAGGAACTCAGTCAGGAGGTGGAGACCATCCAGGCGACCACACGGGACAGCAGTTCAGAGGAGCGTCTGACTCCTGTCGTCCTCGCTCAGCAGGCTGCCCAGCTCAAACAGCAGCTGGTCTCTGCCCACCTGGACTCACTGCTAGGACCACAGGCACATATTAATTTAGCTGACCCAGATGGAGCACTGGCCAaaCGTCTGTTAACCCAGCTGGAGGCAGTGAGGGGCAGTAGGGGCAGTACAGGGGAGGGGAAGGCCCCAGCAGCTAAAGGTCCTGACGGTGTGGTGTTGTATGAGCTACACAGCCGGCCAGAGCAGGAGAAGTTCACAGACGCTGCCAAGATGGCAGAGTTGGAGAAGAGACTGTCAGAGCTGGAGACTGCTGTGGGTTCTGGATCAGACAAACCGGGACCTCTGAGTGCTGGGGTGCAGGGAGGCAGTCTCATGgacacTATGGAGCTGCTGCAGGCGAGGGTCAGTGCTCTGGACTCAGCCACTCTGGACCAGGTGGAAGCCAGGCTGCAGAGCGTCCTTGGAAAGATGAATGAGATTGCAAAGCACAAAGCAACCATTGAAGATGCTGGCACACAGAACAAgGTGTCTCAGCTGTATGACGTGGTGCAGAAGTGGGACGCCATGGCAACCTCTCTGCCCCAGGTGGTGCAGAGGCTCATGGCTGTCAAGGAGTTGCATGAACAAGccatgCAGTTTGGTCAGCTGCTGACCCACCTGGACACCACCCAGCAGATGATCAACAACTCTCTGAAGGACAACGGGACACTGCTCTCACAGgTTCAGACAACCATGAAGGAGAATCTCTTGTCTGTAGAGGAGAACTTTGCAGCTCTGGACCAGAGAATGAAGACTCTCAACAAATAAATCTGGtttctttattaaaaaaaaaaaaaaacgtctgtCAGGACAGTTGGGCAAATTGAGGGAGTGGAGGatcttatctctctctgtatctcttccACGTCAGCCTTCTTTTTTTTCCTGCAAAGTGGAATGTTTTGATTTGAAagtataaaaaaagaaaaaaccgGACAAAAAAAAGCTCAAATGGCCACCAAATTTTCttgatttatttttctccttttccACATCTCTCCATTTGAAGTCTTTAATTTAGTATCAAATGCAATGCATTACacccacatatatatatatatattatccctTCAAAGCTCGCTGGCTTTTTCGCAATGAAAAATATTTATCCAGATCCTTTCAACCTCTTCATCCACACTAGTTGTAGTTCTGTGCTACAACATTCCGCTAAGTCATTTCATTGAATGTCCCAATTTTGAGGGCTCAAGAAGTGGAATAGCCATGTTGTCTACAACATTACTGCACAAAAACAAACAACCAATGCTGATTTATCCACCCTTTTCCTGAAGTATACACTTTTGCACACTTCCTGTTGTGGATTTAACAACGGTGGAAAAAGTCCCTCCCTCTAATCCTTACACCAATACAATGACGGGAAGTGTGctagtgcacactttgggagaagGGTGAAGAATCGGGACGCGTCGTCAACCAGAAAGACGATGTATGGACATGTagcagtgtgtgttggggggggccTGAAGTCCCGGAGGGATGCTTGTAAATATGCCTGTGTACCTTAAATGTTTCATGCTCAGTTGCTTGTAACTTATTATTATTGTGGCTGAGACTAAAATAC
>XM_036950861.1
GCTCGTCCACGCAAATCTCGCGAGATTGTAATGCTCGTCCGCTACTGAACAGTCGAGCTGTCAGAATACAGTTATTAAAATACAAAAGAAGCGCTTTATGTTAGGGAGTTGTTTGGCTACACAGGGTGAAAGGATCCCTTTTTTTGCTTGTTCATTTAGCTAGCGTTTTGAAAACGGACTAATAACTTTTATCCACAAGGTCCATCGTTATTTCAGGTATCTTTGTCACGTCTAAGGGGGTTTTTGTCTACTCATCCACCGGCCTCGTCCTTGTAACCTCAACAATGGCTGATCCCAAATACGCCAATTTACCTGGAATCGCGTCCAACGAGCCAGATGTGTATGAGACCAGTGACCTGCCAGAAGATGATCAGGCCCAGTTTGAGTCGGAAGAGCTGTGCAGTGACAGCGTGGAGAGGATCGTGGTCAACCCCAACGCAGCCTACGACAAGTTCAAGGACAAGAGGGTCAGCACTAAAGGCCTCGACTTCTCAGATCGTATCAGTAAGAACAAAAGAGTGGGCTATGAGTCGGGAGAATATGAGATTttGGCGGAGGGCTGTGGGGTGAAGGAAACCCCCCAGCAGAAGTACCAGCGGCTGGTTAATGAGATCCAGGAACTCAGTCAGGAGGTGGAGACCATCCAGGCGACCACACGGGACAGCAGTTCAGAGGAGCGTCTGACTCCTGTCGTCCTCGCTCAGCAGGCTGCCCAGCTCAAACAGCAGCTGGTCTCTGCCCACCTGGACTCACTGCTAGGACCACAGGCACATATTAATTTAGCTGACCCAGATGGAGCACTGGCCAaaCGTCTGTTAACCCAGCTGGAGGCAGTGAGGGGCAGTAGGGGCAGTACAGGGGAGGGGAAGGCCCCAGCAGCTAAAGGTCCTGACGGTGTGGTGTTGTATGAGCTACACAGCCGGCCAGAGCAGGAGAAGTTCACAGACGCTGCCAAGATGGCAGAGTTGGAGAAGAGACTGTCAGAGCTGGAGACTGCTGTGGGTTCTGGATCAGACAAACCGGGACCTCTGAGTGCTGGGGTGCAGGGAGGCAGTCTCATGgacacTATGGAGCTGCTGCAGGCGAGGGTCAGTGCTCTGGACTCAGCCACTCTGGACCAGGTGGAAGCCAGGCTGCAGAGCGTCCTTGGAAAGATGAATGAGATTGCAAAGCACAAAGCAACCATTGAAGATGCTGGCACACAGAACAAgGTGTCTCAGCTGTATGACGTGGTGCAGAAGTGGGACGCCATGGCAACCTCTCTGCCCCAGGTGGTGCAGAGGCTCATGGCTGTCAAGGAGTTGCATGAACAAGccatgCAGTTTGGTCAGCTGCTGACCCACCTGGACACCACCCAGCAGATGATCAACAACTCTCTGAAGGACAACGGGACACTGCTCTCACAGgTTCAGACAACCATGAAGGAGAATCTCTTGTCTGTAGAGGAGAACTTTGCAGCTCTGGACCAGAGAATGAAGACTCTCAACAAATAAATCTGGtttctttattaaaaaaaaaaaaaaacgtctgtCAGGACAGTTGGGCAAATTGAGGGAGTGGAGGatcttatctctctctgtatctcttccACGTCAGCCTTCTTTTTTTTCCTGCAAAGTGGAATGTTTTGATTTGAAagtataaaaaaagaaaaaaccgGACAAAAAAAAGCTCAAATGGCCACCAAATTTTCttgatttatttttctccttttccACATCTCTCCATTTGAAGTCTTTAATTTAGTATCAAATGCAATGCATTACacccacatatatatatatatattatccctTCAAAGCTCGCTGGCTTTTTCGCAATGAAAAATATTTATCCAGATCCTTTCAACCTCTTCATCCACACTAGTTGTAGTTCTGTGCTACAACATTCCGCTAAGTCATTTCATTGAATGTCCCAATTTTGAGGGCTCAAGAAGTGGAATAGCCATGTTGTCTACAACATTACTGCACAAAAACAAACAACCAATGCTGATTTATCCACCCTTTTCCTGAAGTATACACTTTTGCACACTTCCTGTTGTGGATTTAACAACGGTGGAAAAAGTCCCTCCCTCTAATCCTTACACCAATACAATGACGGGAAGTGTGctagtgcacactttgggagaagGGTGAAGAATCGGGACGCGTCGTCAACCAGAAAGACGATGTATGGACATGTagcagtgtgtgttggggggggccTGAAGTCCCGGAGGGATGCTTGTAAATATGCCTGTGTACCTTAAATGTTTCATGCTCAGTTGCTTGTAACTTATTATTATTGTGGCTGAGACTAAAATAC

Function

NR:

description
dynactin subunit 2

GO:

id name namespace
GO:0007017 microtubule-based process biological_process
GO:0005869 dynactin complex cellular_component

KEGG:

id description
K10424 DCTN2; dynactin 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950858.1 False 2318 mRNA 0.48 15 86249232 86276058
XM_036950859.1 False 2312 mRNA 0.48 14 86249232 86276058
XM_036950860.1 False 2309 mRNA 0.48 14 86249232 86276058
XM_036950861.1 True 2304 mRNA 0.48 13 86249232 86276059

Neighbor

gene id symbol gene type direction distance location
LOC110494779 ddit3 coding downstream 6241 86236554 ~ 86242991 (-)
LOC110493286 LOC106566136 coding downstream 65627 86118575 ~ 86183605 (-)
LOC110494776 LOC106566127 coding downstream 536102 85710201 ~ 85713130 (-)
LOC110494775 LOC106566119 coding downstream 823838 85344521 ~ 85425394 (-)
LOC118940505 NA coding downstream 922520 85325153 ~ 85326712 (-)
igsf8 igsf8 coding upstream 264740 86540799 ~ 86555989 (-)
sp7 sp7 coding upstream 329881 86605940 ~ 86610581 (-)
tespa1 LOC106566176 coding upstream 397393 86673452 ~ 86697487 (-)
LOC110495202 LOC106566175 coding upstream 435394 86711453 ~ 86714926 (-)
LOC110494797 LOC106596199 coding upstream 464489 86740548 ~ 86774465 (-)
G1500748 NA non-coding downstream 56835 86190858 ~ 86192397 (-)
G1500728 NA non-coding downstream 89355 86158498 ~ 86159877 (-)
G1500717 NA non-coding downstream 112005 86135194 ~ 86137227 (-)
G1500710 NA non-coding downstream 137474 86110908 ~ 86111758 (-)
G1500702 LOC106566131 non-coding downstream 142762 86105132 ~ 86106470 (-)
G1500774 NA non-coding upstream 4401 86280460 ~ 86281241 (-)
G1500775 NA non-coding upstream 5830 86281889 ~ 86282188 (-)
G1500814 NA non-coding upstream 133168 86409227 ~ 86409700 (-)
G1500815 NA non-coding upstream 140078 86416137 ~ 86416473 (-)
G1500818 NA non-coding upstream 145284 86421343 ~ 86421546 (-)
G1499684 NA other downstream 961115 85251788 ~ 85288117 (-)
G1499671 NA other downstream 1026113 85221125 ~ 85223119 (-)
G1498522 NA other downstream 2191840 84051010 ~ 84057392 (-)
G1498442 NA other downstream 2266338 83982341 ~ 83982894 (-)
G1500834 LOC106566150 other upstream 173620 86449679 ~ 86450734 (-)
LOC110493290 map3k12 other upstream 522006 86798065 ~ 86880836 (-)
G1501650 LOC106566166 other upstream 857999 87134058 ~ 87166800 (-)
G1501745 NA other upstream 1118721 87394780 ~ 87395835 (-)
dnsl3 dnsl3 other upstream 1886219 88162116 ~ 88175346 (-)

Expression


Co-expression Network