tespa1 (LOC106566176)


Basic Information

Item Value
gene id tespa1
gene name LOC106566176
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86673452 ~ 86697487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950866.1
CTTGTTACGCAGGGAGGATGTATGTCACAAGTGTTTCACACGCTCTTTTTTTTCTTAAATTGAAACCACACGAACTTCCTTTTCTACCTTCCTTGTATTGTATTTGCGCGTCAAGAGACAGTCAGAGGAGTTGACAGCAATGATGTATATATTATACACATTGGTTTGAGAAAGAGAGGCGCGAACATGTAGCCTAGGCGTTGTGTTGATAAAGGTTGAAACATTTATCCAGGATGAACCGTTCCAGTAAATTGTCATCTGAAAAACAGACGAAAACCTGGATGAAATATGGAGTGCTATGCTGACAACAAGATGCAACTCGAGACCGGTGAGCGTAGTGGGAGAAACCAGAATTGAAACCTGCGGTGCTTCAGTGAAGCCGTCTTGTCTGAAGAGGATCACTGTAACGCAGACggagggagtcaggaagcaggtgcagtcgccccccccccaccccctcatctGATGGAGAGGCCGTCTTCTACAACCAGGCGTCAGGCCTGGTTCCAGACCGGTCGCCAGTGGCCTACCCTGAAAGAACAAGATCCACAGGgacctccatccacccacccgtCTGTTCCACACCAGTCTGCATCAGAGGATGATGTCTTCTCAGATGGATGCTCAGCAGGAAAGATTGAGAGCTGGCTGCTGGGCTGTGGGCGGGAGACGGACTCAGAAAACTCTAGACATAATCTGACTGTTGaGTCTCTGCTGAAATCAAAAAGTTTTGAAGATGACCTGAGTCTGGGGGCTGAGGCTACAGTATTAGATGTTGAGGAAGGCGTCTCAGAACTGAGCAGCTGCCCACTGCTGTTTCCGCCACCCAAACATCCTCACAGAGGAGTCACCACCAGTACTCCCCGCCAGAGACTGGCTCTGCCCCTTCTCCACCTGGGTCACAGTCTGGCCTCCAGTGGGCTCTCCAAAAGCACCAGTAAAGCCTCGAGtgTGTCGGAGGCCCTGCAGATGTGTGCGGAGGATGCAGAGGAGACTCTGTACCAGTTAGGGTTTGGTTGTGATGAGCCTGAGGTGACGGCCCGTATCCCTATCCGCTTCATCAACTTCCCCTCCCATGCCCACGGCATCAACCTCCGCCTCTTTCTTCAGTCCCAACTGCACCGGCTCCGACAGGAGGACCCAGGACTCTCCCTGGCCAGCCGTTTCAGGCAGGTAGAGGTGCTGACAGCCATGGCCAACGCCTTCTACTCCCTCTACTCACACGTGTCCCGCACGCCCCTCCAGAAGCTCGCCCCTCCTGAGTTCAGCTTCTCCCCCACCGCTGACGGGCAGATTGGACGGCGCTTCATGGGAAGTGTCCGCAGCGAACCGAGGTCTCCAGTGGAACGACTCAAGGATACGGTTTCTAAGATGTGCCTGTATACTGGCTCTGGGGCTTCTGCCCGGCTGGGGTCGGACTCTGCCTGCCCCAGACCAGGACTCTCCCCCGGGCCTGGGTCGGCACCCAAGAAGAGAAGCAGCCTTCCTGACTTGGTGGGTCTGGTCCTGGAGAACACCAAGGCAGAGCCTTTAtccagagacatggaggaggataATCAGGATACAGGGAACAGTAATGAGACGAGTGCTGCTGTGGACACGatggtgagcgagagagagacagagacacagggacacacagacggggagggggagcaggggtTGTTTTCAGATGTACAGGATATGGACACTGGGGATAGTAACAAGACGTGTGCTGTGGGCACACGTATGTtccgggacagagagacagagacaccggGACATAGAGACACAGTCAGGGACAAGGAGTTGGAGCAGGGATCGTCATCAGATGGGAATGGAGTTGAtttagagagagagcgacatcCTGACAGAACACCCAACTTTGGGGCATCATCACTTTCAGAATCAGGTCATCAAAGAGAGCCCAGTAGTAGGAAGAAGCTGGACTTTGGCCTTACTACTCCAAGACCTACTTGTGAAGTTGGAGAAACTCAAAACACAATTCATCCCACGGGCTGGGCAACAGTAGTGGCACCGGTCGCCAAGGTTACCCGTGACATCACCCGTCCTCCGATCGTTGAGTGTGTTCACCAGGCTCCGTACGGCAGTCAACTACAACAGTGGAATAGTAACACGCAGGCGGAGGACATTTTGTCCTCTGAGAACGTCAGAAGATCTGACCGATCCTTCACCACGTCAGACGGACTTCACAAACCTAGGGAGAAGGATTTCTTAACCACCAGTAACTCAGCCAAGAGTTTAGAGGTCGCAGTAACTCCCATGTCTAAGGTGGAGTCTAGTTTGGGAGAAGCTGGAACACTGGTTGTGTCAACGTTCGTGTCTATGGAGCTCCTTAGTTGCAGGAAGTCCCCTTGTCTCATCACTGTTACTGATGTGACACCTTCTAGTTCTTTAGACACAGATGCACCTGAGATGATTCTCCCTGCCAGTGGTGGGACCACAGTGGTGCCTCCAGCAGCCCAGTATTATCCAGGTGTATGGAGGAACAAGAGGTACCTGAGTCCTCTGAAACCAACACCGCTCCAGGGGCAGGTCTCCCACACTATTCAACAGGCCAACTCCTTTGAGCTGGAGGAGGTACAGAGCGCAGGGGAGGAAGACTTTGGACAGCAAGAAACTATAAGGTCAACATCTTTGTCCCGGTCCACTGTCAATCAAAACAAAGGTCTGGTGGTTCGAGGGGACAGCATGCAATCAGACAGTAGTGGCTACGCTGATGACGACGTCGACTCCCCTGACAGAGACAAGAGCTGACGAACAGGACCCTCGGGGAAATAAACTCCGGGAGCTATTATTTACATGAGTCACACAAACATATTGAGCCACTGAAGGTACAGTCAGATACAGACTGTTATTGTGAATGACATCATGAAATCCGGTGGCATTCTGACTACGCCCACTTCGACGTCACACTAGTGCTTCAACCGAGTTCAACGTTGACTTCCGTTGGTAAACGCATTGCCCACGTAGGCATATTTAACACACAGATCAAGTTTCCTAACCTGACGCGCAGGCGTTGTGTGCCAGACGATGCAATGTGGTTAGCCGACATGTTTAAATACTTGTCCAGGCGCTGTAAGATCTGGCATGAGTCTTCAGTGTAAGTCGGACAGGAACTCAACCCTTCGGTTCGATTGTGTAGACTGTCTTGTGTCCAGTGTTTCTGTTGACAGTCATTAA
>XM_036950867.1
CTTGTTACGCAGGGAGGATGTATGTCACAAGTGTTTCACACGCTCTTTTTTTTCTTAAATTGAAACCACACGAACTTCCTTTTCTACCTTCCTTGTATTGTATTTGCGCGTCAAGAGACAGTCAGAGGAGTTGACAGCAATGATGTATATATTATACACATTGGTTTGAGAAAGAGAGGCGCGAACATGTAGCCTAGGCGTTGTGTTGATAAAGGTTGAAACATTTATCCAGGATGAACCGTTCCAGTAAATTGTCATCTGAAAAACAGACGAAAACCTGGATGAAATATGGAGTGCTATGCTGACAACAAGATGCAACTCGAGACCGGTGAGCGTAGTGGGAGAAACCAGAATTGAAACCTGCGGTGCTTCAGTGAAGccccccccccaccccctcatctGATGGAGAGGCCGTCTTCTACAACCAGGCGTCAGGCCTGGTTCCAGACCGGTCGCCAGTGGCCTACCCTGAAAGAACAAGATCCACAGGgacctccatccacccacccgtCTGTTCCACACCAGTCTGCATCAGAGGATGATGTCTTCTCAGATGGATGCTCAGCAGGAAAGATTGAGAGCTGGCTGCTGGGCTGTGGGCGGGAGACGGACTCAGAAAACTCTAGACATAATCTGACTGTTGaGTCTCTGCTGAAATCAAAAAGTTTTGAAGATGACCTGAGTCTGGGGGCTGAGGCTACAGTATTAGATGTTGAGGAAGGCGTCTCAGAACTGAGCAGCTGCCCACTGCTGTTTCCGCCACCCAAACATCCTCACAGAGGAGTCACCACCAGTACTCCCCGCCAGAGACTGGCTCTGCCCCTTCTCCACCTGGGTCACAGTCTGGCCTCCAGTGGGCTCTCCAAAAGCACCAGTAAAGCCTCGAGtgTGTCGGAGGCCCTGCAGATGTGTGCGGAGGATGCAGAGGAGACTCTGTACCAGTTAGGGTTTGGTTGTGATGAGCCTGAGGTGACGGCCCGTATCCCTATCCGCTTCATCAACTTCCCCTCCCATGCCCACGGCATCAACCTCCGCCTCTTTCTTCAGTCCCAACTGCACCGGCTCCGACAGGAGGACCCAGGACTCTCCCTGGCCAGCCGTTTCAGGCAGGTAGAGGTGCTGACAGCCATGGCCAACGCCTTCTACTCCCTCTACTCACACGTGTCCCGCACGCCCCTCCAGAAGCTCGCCCCTCCTGAGTTCAGCTTCTCCCCCACCGCTGACGGGCAGATTGGACGGCGCTTCATGGGAAGTGTCCGCAGCGAACCGAGGTCTCCAGTGGAACGACTCAAGGATACGGTTTCTAAGATGTGCCTGTATACTGGCTCTGGGGCTTCTGCCCGGCTGGGGTCGGACTCTGCCTGCCCCAGACCAGGACTCTCCCCCGGGCCTGGGTCGGCACCCAAGAAGAGAAGCAGCCTTCCTGACTTGGTGGGTCTGGTCCTGGAGAACACCAAGGCAGAGCCTTTAtccagagacatggaggaggataATCAGGATACAGGGAACAGTAATGAGACGAGTGCTGCTGTGGACACGatggtgagcgagagagagacagagacacagggacacacagacggggagggggagcaggggtTGTTTTCAGATGTACAGGATATGGACACTGGGGATAGTAACAAGACGTGTGCTGTGGGCACACGTATGTtccgggacagagagacagagacaccggGACATAGAGACACAGTCAGGGACAAGGAGTTGGAGCAGGGATCGTCATCAGATGGGAATGGAGTTGAtttagagagagagcgacatcCTGACAGAACACCCAACTTTGGGGCATCATCACTTTCAGAATCAGGTCATCAAAGAGAGCCCAGTAGTAGGAAGAAGCTGGACTTTGGCCTTACTACTCCAAGACCTACTTGTGAAGTTGGAGAAACTCAAAACACAATTCATCCCACGGGCTGGGCAACAGTAGTGGCACCGGTCGCCAAGGTTACCCGTGACATCACCCGTCCTCCGATCGTTGAGTGTGTTCACCAGGCTCCGTACGGCAGTCAACTACAACAGTGGAATAGTAACACGCAGGCGGAGGACATTTTGTCCTCTGAGAACGTCAGAAGATCTGACCGATCCTTCACCACGTCAGACGGACTTCACAAACCTAGGGAGAAGGATTTCTTAACCACCAGTAACTCAGCCAAGAGTTTAGAGGTCGCAGTAACTCCCATGTCTAAGGTGGAGTCTAGTTTGGGAGAAGCTGGAACACTGGTTGTGTCAACGTTCGTGTCTATGGAGCTCCTTAGTTGCAGGAAGTCCCCTTGTCTCATCACTGTTACTGATGTGACACCTTCTAGTTCTTTAGACACAGATGCACCTGAGATGATTCTCCCTGCCAGTGGTGGGACCACAGTGGTGCCTCCAGCAGCCCAGTATTATCCAGGTGTATGGAGGAACAAGAGGTACCTGAGTCCTCTGAAACCAACACCGCTCCAGGGGCAGGTCTCCCACACTATTCAACAGGCCAACTCCTTTGAGCTGGAGGAGGTACAGAGCGCAGGGGAGGAAGACTTTGGACAGCAAGAAACTATAAGGTCAACATCTTTGTCCCGGTCCACTGTCAATCAAAACAAAGGTCTGGTGGTTCGAGGGGACAGCATGCAATCAGACAGTAGTGGCTACGCTGATGACGACGTCGACTCCCCTGACAGAGACAAGAGCTGACGAACAGGACCCTCGGGGAAATAAACTCCGGGAGCTATTATTTACATGAGTCACACAAACATATTGAGCCACTGAAGGTACAGTCAGATACAGACTGTTATTGTGAATGACATCATGAAATCCGGTGGCATTCTGACTACGCCCACTTCGACGTCACACTAGTGCTTCAACCGAGTTCAACGTTGACTTCCGTTGGTAAACGCATTGCCCACGTAGGCATATTTAACACACAGATCAAGTTTCCTAACCTGACGCGCAGGCGTTGTGTGCCAGACGATGCAATGTGGTTAGCCGACATGTTTAAATACTTGTCCAGGCGCTGTAAGATCTGGCATGAGTCTTCAGTGTAAGTCGGACAGGAACTCAACCCTTCGGTTCGATTGTGTAGACTGTCTTGTGTCCAGTGTTTCTGTTGACAGTCATTAA

Function

NR:

description
sperm-specific antigen 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950866.1 False 3183 mRNA 0.52 13 86673452 86697487
XM_036950867.1 True 3120 mRNA 0.52 12 86673452 86697487

Neighbor

gene id symbol gene type direction distance location
sp7 sp7 coding downstream 62871 86605940 ~ 86610581 (-)
igsf8 igsf8 coding downstream 117463 86540799 ~ 86555989 (-)
dctn2 LOC106566142 coding downstream 397393 86249232 ~ 86276059 (-)
LOC110494779 ddit3 coding downstream 430461 86236554 ~ 86242991 (-)
LOC110493286 LOC106566136 coding downstream 489847 86118575 ~ 86183605 (-)
LOC110495202 LOC106566175 coding upstream 13966 86711453 ~ 86714926 (-)
LOC110494797 LOC106596199 coding upstream 43061 86740548 ~ 86774465 (-)
LOC110493290 map3k12 coding upstream 103466 86798065 ~ 86880836 (-)
col2a1b LOC106566180 coding upstream 252723 86950210 ~ 87034105 (-)
LOC110494790 ppp1r1a coding upstream 563006 87260493 ~ 87296463 (-)
G1500913 NA non-coding downstream 99 86671547 ~ 86673353 (-)
G1500889 NA non-coding downstream 58096 86613680 ~ 86615356 (-)
G1500879 NA non-coding downstream 93772 86575582 ~ 86579680 (-)
G1500866 NA non-coding downstream 129465 86543287 ~ 86543987 (-)
G1500840 NA non-coding downstream 136336 86536234 ~ 86537116 (-)
G1500941 NA non-coding upstream 5902 86703389 ~ 86781368 (-)
G1500911 sp1 non-coding upstream 11208 86708695 ~ 86711199 (-)
G1500958 NA non-coding upstream 35183 86732670 ~ 86733096 (-)
G1500943 NA non-coding upstream 91041 86788528 ~ 86790791 (-)
G1500834 LOC106566150 other downstream 222718 86449679 ~ 86450734 (-)
G1499684 NA other downstream 1385335 85251788 ~ 85288117 (-)
G1499671 NA other downstream 1450333 85221125 ~ 85223119 (-)
G1498522 NA other downstream 2616060 84051010 ~ 84057392 (-)
G1501650 LOC106566166 other upstream 436571 87134058 ~ 87166800 (-)
G1501745 NA other upstream 697293 87394780 ~ 87395835 (-)
dnsl3 dnsl3 other upstream 1464791 88162116 ~ 88175346 (-)
G1502489 NA other upstream 1660665 88358152 ~ 88425505 (-)

Expression


Co-expression Network