LOC110494798 (amhr2)


Basic Information

Item Value
gene id LOC110494798
gene name amhr2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 86715101 ~ 86734187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950869.1
ggaactcggggatAAAAAACGAGCTCCGAGACCGTATTTAGTTTATGTCAGGGACCATAAACTAGATATCGTTCCTTTAACATATCATATTGATGATGATTTGGAATGGGACAATTTTACTCTAACCTACTTATTTTCAACAGTACAGTCcaaaatatatttataactaacccaagatagttaATCTGTGTCGTTTTCAGTGGGAGAAAATGaagcatagtgggcagaacagggcagagccaagcacgagctagcgagatcctattggcacgTTGTaacatttatttgcatatttccgttagggaacgcctccTCTGTGAAATGCGCGTGTGCAGAATCTCATTTAGACCTAGTACTCTTTCTTAACAGCgcccttttttcttttttttcttcttttaaaaaaaaactttgtcaAAGAGTCAAATCTGTAAAATATAGTGCACTGTGTTcgtaacagattctagtttttgGAACAGAAAAATGTATTGAGATCAGATGTTTCATCAATGAGAAAATTAGAAGAATGTCGGCCCAGTTCCAGCCAGTTCCATCCTCTCCCACTACCCGCGACTGGACTTCCTCTCACCACCATATTTGGGGGGTGAGAAAACGTTCTAAACGGATGCTTCGACTTTATAGCTCCTGTGACGTATCTGAGTTACCCCTTCTGTCTGTGGTACGGTTGacagagatgaggtaaggggGGCAGGGGATGTCTATGAGGGGGCATACAGGAGGAGAAGGAAACGTGCCACATCGATAAAGgtCACAGGTGTGTGATAGTGAAGGGGGGCTGGACTGCGTGGGAAACTCAGCTTCTATTCCCATCCCAGCTCACAGACATCATACCTAGCCAGCAGTCAGCTCACAGACATCAGACATAGCTTACAGTCAGCTCACAGACATCAGACCTAGCCAGCAGTCagctcacagagagacagaacaaatGTGGTTGTATTTAGTCATCTTTGGATGTCTGTCACTGTGTGTCCCTGCTCCAACGGTGGAGCAGGGAAGGAGTTGTGTGTTCCTGACCAGTTCCCGTAACTCCAAGAACATGGAGGAGGGTCGCGTTAACGGTACAATCCAGTACTGTGCCCACGCTAACTGCTGTGTCGGCTTCTTTCGTATTATCGAGGGCCAGCCAGTGGCAGAACTACAAGGTTGCAAAATGGTAGTCGGTGGCTGCCTAGATTCTACCTGCTTTACATCAACCACCCATTTAGACTACATCAGATGTGAGTGCAGCTCAAACCTCTGTAATGGCAACATCACGTGGAACCCAGAAGAGAAGCAACCTCAACTCAAACACTCATCTCACTCTGCAGACATGGTCACGGCCACTGTGGTTGTCCTTGGGATGTTACTGTGTACCCTAGTGGTGGCAGTTAAATGCAGACATCGTTTCAGAGGTTACGATGACAAGCAGCATCTATCTCTGCCAGAGGAATCTCTGACCTCACTGTGCTCATGCCACATATCAAAACAGTCTGATATGGACCTGACCAGCCTGGAACTACAACAGGAAAGTATTTACATTGTGGGTAGTGGTCACTTTGCGTCGGTGTGGCAGGGAAGCTACCAAGGGACTACGGTGGCTGTGAAGGTGTTCCCCACCTGGTGCAGACAGGAGTTCACAGTGGAGAGGGAAGTGTACGGACTACCACACCTGGTGCATGCTGGGATTGCTCACTTCCTGGGAGCTGGCAGGAAGTCAGATAGCGGAGACTGTGTCCTGCTCCTGGAGCTAGCCACATGCGGCTCTCTCAGCTCCTTCCTGTCCAAGAACAGCAGTGACTGGACGACAACACTGAAGCTGGCCCAGTCTCTGTCTGAGGGACTGGCTTACCTCCATTCTGACTTCTACAGGCATGGGGTGCACAAGCCAGCGGTGGCCCACAGAGATCTCAGTAGTAACAACGTGCTAGTGAGGGACGATGGTACCTGTGTCCTGTGTGACTTTGGCTCTTCCACCATCCTGCGCTCATGCGCCGGTCCACACAGCTGGCAGCGCTACATGGTTAACGTACAGAGCCAGGTGGGGACGTTGTGCTATATGGCCCCCGAGCTCCTGGATGGCTGTGTGAACCTGAGCAGTGGCTGGTGTCTCATACAGGGAGACGTCTACTCCTTAGGAACGCTGCTTTGGGAGATGCTGATGCGCTGCTCAGACCTTTTCATAGGCTGCCCAGTGCCAGAACACAGACTGCCTTATGAAGAGGAGCTAGGGGCCAGTCCTTCTTTAGAGCAGCTCATAGTCCATGTATCTGAGAGAAGGGAACGTCCTTCAGTACCCAAACACTGGCAACAGGGCTTGCATGACATTCTGTTGGACAGTTGGGACCATGACTCAGATGCCAGACTGACAGCCCAGTGTGCCAGGGACAGACTAGTGTCTCTACCCCCCTGTTGCTCCATatgagatatagatatatatatatatatataatattttggGTTATGTAATTATTCCTTAGTCcaggaccagactgacagctcagtGTGCCAGTCTCTACTCTCATGTTGACGTGTGTGtggtattctattgtattatattctatactattctacaatATTCTCTATAATATTCCATTCTAtaatattatattctatactattcaatTCTATAATATTCCATTCTAtaatattctattctatactattcaatTCTATAATATTCCATTCTATACTTAGTCACCTCATTATTGTCACTGTCACAGTTGGAATAGATGTGTCTGCTTGCTATTTCATTGACTTACACATTTCCTACATCTGTTTGGTTTATTTTACCTAATGTTTGTGCATGCAGAAAGTGTACTGTAGTGAAACTCTATTGGGCTCTTGCTAAAGACTTGTTGGACATTTGTTGTAGAATCCTATAAACCTAGTGGTAAACCGCACAGCAGAATCAGACGTTAGGTTGCTAAGGTACGACTGAGGTCAAAGCTGCTTTTAAATCTACATTTTATGTTGGATCACAGTAATATTCTCTGACATTTTTTATGTTGATATTTGTACGGTGGAGGACAGAAACGTGATTGGATTATCTTTACTGATTTTGTGCAGAAGGCTTGAATAAAGCTTATGGTGATGAACATCATAGGCA
>XM_036950870.1
gaactcggggatAAAAAACGAGCTCCGAGACCGTATTTAGTTTATGTCAGGGACCATAAACTAGATATCGTTCCTTTAACATATCATATTGATGATGATTTGGAATGGGACAATTTTACTCTAACCTACTTATTTTCAACAGTACAGTCcaaaatatatttataactaacccaagatagttaATCTGTGTCGTTTTCAGTGGGAGAAAATGaagcatagtgggcagaacagggcagagccaagcacgagctagcgagatcctattggcacgTTGTaacatttatttgcatatttccgttagggaacgcctccTCTGTGAAATGCGCGTGTGCAGAATCTCATTTAGACCTAGTACTCTTTCTTAACAGCgcccttttttcttttttttcttcttttaaaaaaaaactttgtcaAAGAGTCAAATCTGTAAAATATAGTGCACTGTGTTcgtaacagattctagtttttgGAACAGAAAAATGTATTGAGATCAGATGTTTCATCAATGAGAAAATTAGAAGAATGTCGGCCCAGTTCCAGCCAGTTCCATCCTCTCCCACTACCCGCGACTGGACTTCCTCTCACCACCATATTTGGGGGGTGAGAAAACGTTCTAAACGGATGCTTCGACTTTATAGCTCCTGTGACGTATCTGAGTTACCCCTTCTGTCTGTGGTACGGTTGacagagatgaggtaaggggGGCAGGGGATGTCTATGAGGGGGCATACAGGAGGAGAAGGAAACGTGCCACATCGATAAAGgtCACAGGTGTGTGATAGTGAAGGGGGGCTGGACTGCGTGGGAAACTCAGCTTCTATTCCCATCCCAGCTCACAGACATCATACCTAGCCAGCAGTCAGCTCACAGACATCAGACATAGCTTACAGTCAGCTCACAGACATCAGACCTAGCCAGCAGTCagctcacagagagacagaacaaatGTGGTTGTATTTAGTCATCTTTGGATGTCTGTCACTGTGTGTCCCTGCTCCAACGGTGGAGCAGGGAAGGAGTTGTGTGTTCCTGACCAGTTCCCGTAACTCCAAGAACATGGAGGAGGGTCGCGTTAACGGTACAATCCAGTACTGTGCCCACGCTAACTGCTGTGTCGGCTTCTTTCGTATTATCGAGGGCCAGCCAGTGGCAGAACTACAAGGTTGCAAAATGGTAGTCGGTGGCTGCCTAGATTCTACCTGCTTTACATCAACCACCCATTTAGACTACATCAGATGTGAGTGCAGCTCAAACCTCTGTAATGGCAACATCACGTGGAACCCAGAAGAGAAGCAACCTCAACTCAAACACTCATCTCACTCTGCAGACATGGTCACGGCCACTGTGGTTGTCCTTGGGATGTTACTGTGTACCCTAGTGGTGGCAGTTAAATGCAGACATCGTTTCAGAGGTTACGATGACAAGCAGCATCTATCTCTGCCAGAGGAATCTCTGACCTCACTGTGCTCATGCCACATATCAAAACAGTCTGATATGGACCTGACCAGCCTGGAACTACAACAGATTGTGGGTAGTGGTCACTTTGCGTCGGTGTGGCAGGGAAGCTACCAAGGGACTACGGTGGCTGTGAAGGTGTTCCCCACCTGGTGCAGACAGGAGTTCACAGTGGAGAGGGAAGTGTACGGACTACCACACCTGGTGCATGCTGGGATTGCTCACTTCCTGGGAGCTGGCAGGAAGTCAGATAGCGGAGACTGTGTCCTGCTCCTGGAGCTAGCCACATGCGGCTCTCTCAGCTCCTTCCTGTCCAAGAACAGCAGTGACTGGACGACAACACTGAAGCTGGCCCAGTCTCTGTCTGAGGGACTGGCTTACCTCCATTCTGACTTCTACAGGCATGGGGTGCACAAGCCAGCGGTGGCCCACAGAGATCTCAGTAGTAACAACGTGCTAGTGAGGGACGATGGTACCTGTGTCCTGTGTGACTTTGGCTCTTCCACCATCCTGCGCTCATGCGCCGGTCCACACAGCTGGCAGCGCTACATGGTTAACGTACAGAGCCAGGTGGGGACGTTGTGCTATATGGCCCCCGAGCTCCTGGATGGCTGTGTGAACCTGAGCAGTGGCTGGTGTCTCATACAGGGAGACGTCTACTCCTTAGGAACGCTGCTTTGGGAGATGCTGATGCGCTGCTCAGACCTTTTCATAGGCTGCCCAGTGCCAGAACACAGACTGCCTTATGAAGAGGAGCTAGGGGCCAGTCCTTCTTTAGAGCAGCTCATAGTCCATGTATCTGAGAGAAGGGAACGTCCTTCAGTACCCAAACACTGGCAACAGGGCTTGCATGACATTCTGTTGGACAGTTGGGACCATGACTCAGATGCCAGACTGACAGCCCAGTGTGCCAGGGACAGACTAGTGTCTCTACCCCCCTGTTGCTCCATatgagatatagatatatatatatatatataatattttggGTTATGTAATTATTCCTTAGTCcaggaccagactgacagctcagtGTGCCAGTCTCTACTCTCATGTTGACGTGTGTGtggtattctattgtattatattctatactattctacaatATTCTCTATAATATTCCATTCTAtaatattatattctatactattcaatTCTATAATATTCCATTCTAtaatattctattctatactattcaatTCTATAATATTCCATTCTATACTTAGTCACCTCATTATTGTCACTGTCACAGTTGGAATAGATGTGTCTGCTTGCTATTTCATTGACTTACACATTTCCTACATCTGTTTGGTTTATTTTACCTAATGTTTGTGCATGCAGAAAGTGTACTGTAGTGAAACTCTATTGGGCTCTTGCTAAAGACTTGTTGGACATTTGTTGTAGAATCCTATAAACCTAGTGGTAAACCGCACAGCAGAATCAGACGTTAGGTTGCTAAGGTACGACTGAGGTCAAAGCTGCTTTTAAATCTACATTTTATGTTGGATCACAGTAATATTCTCTGACATTTTTTATGTTGATATTTGTACGGTGGAGGACAGAAACGTGATTGGATTATCTTTACTGATTTTGTGCAGAAGGCTTGAATAAAGCTTATGGTGATGAACATCATAGGCA
>XM_036950871.1
gaactcggggatAAAAAACGAGCTCCGAGACCGTATTTAGTTTATGTCAGGGACCATAAACTAGATATCGTTCCTTTAACATATCATATTGATGATGATTTGGAATGGGACAATTTTACTCTAACCTACTTATTTTCAACAGTACAGTCcaaaatatatttataactaacccaagatagttaATCTGTGTCGTTTTCAGTGGGAGAAAATGaagcatagtgggcagaacagggcagagccaagcacgagctagcgagatcctattggcacgTTGTaacatttatttgcatatttccgttagggaacgcctccTCTGTGAAATGCGCGTGTGCAGAATCTCATTTAGACCTAGTACTCTTTCTTAACAGCgcccttttttcttttttttcttcttttaaaaaaaaactttgtcaAAGAGTCAAATCTGTAAAATATAGTGCACTGTGTTcgtaacagattctagtttttgGAACAGAAAAATGTATTGAGATCAGATGTTTCATCAATGAGAAAATTAGAAGAATGTCGGCCCAGTTCCAGCCAGTTCCATCCTCTCCCACTACCCGCGACTGGACTTCCTCTCACCACCATATTTGGGGGGTGAGAAAACGTTCTAAACGGATGCTTCGACTTTATAGCTCCTGTGACGTATCTGAGTTACCCCTTCTGTCTGTGGTACGGTTGacagagatgaggtaaggggGGCAGGGGATGTCTATGAGGGGGCATACAGGAGGAGAAGGAAACGTGCCACATCGATAAAGGATGTCTGTCACTGTGTGTCCCTGCTCCAACGGTGGAGCAGGGAAGGAGTTGTGTGTTCCTGACCAGTTCCCGTAACTCCAAGAACATGGAGGAGGGTCGCGTTAACGGTACAATCCAGTACTGTGCCCACGCTAACTGCTGTGTCGGCTTCTTTCGTATTATCGAGGGCCAGCCAGTGGCAGAACTACAAGGTTGCAAAATGGTAGTCGGTGGCTGCCTAGATTCTACCTGCTTTACATCAACCACCCATTTAGACTACATCAGATGTGAGTGCAGCTCAAACCTCTGTAATGGCAACATCACGTGGAACCCAGAAGAGAAGCAACCTCAACTCAAACACTCATCTCACTCTGCAGACATGGTCACGGCCACTGTGGTTGTCCTTGGGATGTTACTGTGTACCCTAGTGGTGGCAGTTAAATGCAGACATCGTTTCAGAGGTTACGATGACAAGCAGCATCTATCTCTGCCAGAGGAATCTCTGACCTCACTGTGCTCATGCCACATATCAAAACAGTCTGATATGGACCTGACCAGCCTGGAACTACAACAGGAAAGTATTTACATTGTGGGTAGTGGTCACTTTGCGTCGGTGTGGCAGGGAAGCTACCAAGGGACTACGGTGGCTGTGAAGGTGTTCCCCACCTGGTGCAGACAGGAGTTCACAGTGGAGAGGGAAGTGTACGGACTACCACACCTGGTGCATGCTGGGATTGCTCACTTCCTGGGAGCTGGCAGGAAGTCAGATAGCGGAGACTGTGTCCTGCTCCTGGAGCTAGCCACATGCGGCTCTCTCAGCTCCTTCCTGTCCAAGAACAGCAGTGACTGGACGACAACACTGAAGCTGGCCCAGTCTCTGTCTGAGGGACTGGCTTACCTCCATTCTGACTTCTACAGGCATGGGGTGCACAAGCCAGCGGTGGCCCACAGAGATCTCAGTAGTAACAACGTGCTAGTGAGGGACGATGGTACCTGTGTCCTGTGTGACTTTGGCTCTTCCACCATCCTGCGCTCATGCGCCGGTCCACACAGCTGGCAGCGCTACATGGTTAACGTACAGAGCCAGGTGGGGACGTTGTGCTATATGGCCCCCGAGCTCCTGGATGGCTGTGTGAACCTGAGCAGTGGCTGGTGTCTCATACAGGGAGACGTCTACTCCTTAGGAACGCTGCTTTGGGAGATGCTGATGCGCTGCTCAGACCTTTTCATAGGCTGCCCAGTGCCAGAACACAGACTGCCTTATGAAGAGGAGCTAGGGGCCAGTCCTTCTTTAGAGCAGCTCATAGTCCATGTATCTGAGAGAAGGGAACGTCCTTCAGTACCCAAACACTGGCAACAGGGCTTGCATGACATTCTGTTGGACAGTTGGGACCATGACTCAGATGCCAGACTGACAGCCCAGTGTGCCAGGGACAGACTAGTGTCTCTACCCCCCTGTTGCTCCATatgagatatagatatatatatatatatataatattttggGTTATGTAATTATTCCTTAGTCcaggaccagactgacagctcagtGTGCCAGTCTCTACTCTCATGTTGACGTGTGTGtggtattctattgtattatattctatactattctacaatATTCTCTATAATATTCCATTCTAtaatattatattctatactattcaatTCTATAATATTCCATTCTAtaatattctattctatactattcaatTCTATAATATTCCATTCTATACTTAGTCACCTCATTATTGTCACTGTCACAGTTGGAATAGATGTGTCTGCTTGCTATTTCATTGACTTACACATTTCCTACATCTGTTTGGTTTATTTTACCTAATGTTTGTGCATGCAGAAAGTGTACTGTAGTGAAACTCTATTGGGCTCTTGCTAAAGACTTGTTGGACATTTGTTGTAGAATCCTATAAACCTAGTGGTAAACCGCACAGCAGAATCAGACGTTAGGTTGCTAAGGTACGACTGAGGTCAAAGCTGCTTTTAAATCTACATTTTATGTTGGATCACAGTAATATTCTCTGACATTTTTTATGTTGATATTTGTACGGTGGAGGACAGAAACGTGATTGGATTATCTTTACTGATTTTGTGCAGAAGGCTTGAATAAAGCTTATGGTGATGAACATCATAGGCA

Function

symbol description
amhr2 Enables anti-Mullerian hormone receptor activity and hormone binding activity. Involved in anti-Mullerian hormone signaling pathway. Predicted to be integral component of plasma membrane. Predicted to be part of activin receptor complex. Predicted to be active in plasma membrane. Implicated in persistent Mullerian duct syndrome. Biomarker of dysgerminoma and leiomyosarcoma.

NR:

description
anti-Muellerian hormone type-2 receptor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950869.1 False 3106 mRNA 0.46 12 86715101 86734187
XM_036950870.1 False 3093 mRNA 0.46 12 86715102 86734187
XM_036950871.1 True 2899 mRNA 0.45 11 86715102 86734187

Neighbor

gene id symbol gene type direction distance location
sp1 sp1 coding upstream 3887 86699538 ~ 86711214 (+)
tarbp2 tarbp2 coding upstream 41742 86656678 ~ 86673359 (+)
soat2 LOC106566146 coding upstream 203747 86467126 ~ 86511354 (+)
LOC118940507 kif5a coding upstream 262739 86276390 ~ 86452362 (+)
mars1 mars coding upstream 476747 86183733 ~ 86238354 (+)
prr13 NA coding downstream 44857 86779044 ~ 86781359 (+)
LOC110494796 LOC106582661 coding downstream 47384 86781571 ~ 86797881 (+)
myg1 cssa12h12orf10 coding downstream 149128 86883315 ~ 86909700 (+)
LOC110494793 LOC106566167 coding downstream 191208 86925395 ~ 86944826 (+)
nckap1l LOC106566166 coding downstream 399909 87134096 ~ 87172285 (+)
G1500349 NA non-coding upstream 7039 86707490 ~ 86708062 (+)
G1500346 NA non-coding upstream 25808 86688977 ~ 86689293 (+)
G1500337 NA non-coding upstream 54690 86659356 ~ 86660411 (+)
G1500287 NA non-coding upstream 134451 86580388 ~ 86580650 (+)
G1500284 NA non-coding upstream 145849 86569036 ~ 86569252 (+)
G1500359 NA non-coding downstream 3975 86738162 ~ 86740217 (+)
G1500364 NA non-coding downstream 14948 86749135 ~ 86750243 (+)
G1500313 NA non-coding downstream 24984 86759171 ~ 86760479 (+)
G1500373 NA non-coding downstream 54160 86788347 ~ 86788807 (+)
G1500310 NA non-coding downstream 64029 86798216 ~ 86801184 (+)
G1500170 LOC106566147 other upstream 188071 86520830 ~ 86527030 (+)
G1500239 NA other upstream 331556 86382298 ~ 86383545 (+)
G1500198 NA other upstream 446926 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1003242 85625443 ~ 85711859 (+)
G1499374 NA other upstream 1421980 85291785 ~ 85293121 (+)
G1501148 NA other downstream 434352 87168539 ~ 87169007 (+)
LOC110494789 bloc1s1 other downstream 690323 87415720 ~ 87486890 (+)
LOC110494816 LOC106566192 other downstream 1355470 88089634 ~ 88143474 (+)
G1502352 NA other downstream 2035683 88769870 ~ 88800640 (+)
G1502370 NA other downstream 2072791 88806978 ~ 88808969 (+)

Expression


Co-expression Network