LOC110494787 (LOC106566158)


Basic Information

Item Value
gene id LOC110494787
gene name LOC106566158
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 87441839 ~ 87480286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036950909.1
tacacctgttgtattcagcatttcactgtaatgtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcgggtcatgtgactaataacatttgatttgcagAACCCTCATATTCAATAAGGCTGTTCTTATTGAAAGAACTGATGTCCATTATATGAACACAAATAATAAAACGAGACCAATTCATGATTTTGAAAGATTTTTTGGTTATATTCATCATTTAATAATTGCACAGAACATGTCTCTGTATACTCCTCGCCAGCCTATGTCATGACTTCTCCCTACATACCTCACTTGAGTTGCTCGAAGTATTTCAAAACATAGTCTACAGGTTGCAGCCAGCCCTTGAGTATTTGAATACGTTGTATCTTTGGCGCCAGACCTTGTGTTAATCATCTCCTAGAATGTGCTTGGTTGTAATTTCTCATTGGTCACTGTGCTGACCAATGCCCGACCTGACAATACTCAGACGTCGTCGCCAGAGCTCGCTGCTTGTGCGCTCACCGCGACAAGTTTAGAACGCGACAACAGGATTTGATCTGTATAACTGTTGTGGATTTGGCCAAAAACGGAACCATCAGACTGCGGAGAAATAGTTGGAAAGTAACGAAAATAACGAGAAGGTTTCCCGAAGGCAGTTATTCTCCTAGTCTGCTCTTATTTGTGTATAAAGTTGTAAACCATGCATTGTTTGAAAATATTACGGGTGACCAACGCAGCAGCTGTGCAAACCTTTGTGACAGACGCCACTAAAAAAGTGATCAAAAAGTGTTGTTATAACTGTTTATTACCGGGTTGTCATCGTACCGTTAAAATTCACTGTTTCAACACAAGTTCAACAGATCAGCACCGCATTGGAACAACCTCAGATATGGACCACGTGCTTCCCAAACTGAGCGGTGATGTAAAGGGTCTGTTCTCAGGAGTCGAAGATATGCTTTTCTACACCATTACAGACGGTCAGGAACAAGTCCCCGTCTCACACTTTATCTCTGCCCTGAAGAAAACTGGTCTTAATGCGTCAGACCCCCGACTGAAGGACTGTATGGACAAGCTGCAACGTTCCGTAACGGAGTCCTTTCATGACGTCATGATGGACCGGGAACTCTTCCACAAGTGTGTTGGTGGGAACATAGTGCTTCTGATTCAGGCCTTCAGAAAGAAGTTCATCATCCCCGAGTTTGATGCCTTTATAACAAAGATAGATCAAATCTACGACACCGTCCAGAAAAACCATGACGGACATGTAGCAGTCTACATTCCCCACCTGGCCAAGTTCAGTCCTGATCTCTggggtgtgtctctgtgtactgtAGATGGACAGAGACACTCAGTAGGAGAAAGCAAGCAGCCCTTCTGCCTCCAGTCGTGTGTGAAGCCTCTGGAGTATGCTGTGGCCATCCACGAGGCTGGGACAGAGAAGGTACACCGCTATGTGGGGATGGAGCCCAGCGGACTCAAGTTCAACAAGCTCTACCTGGATGAGGAAGACAAACCCCACAACCCCATGGTGAATGCTGGAGCCATTGTCATCAGCTCTCTTATCAAGCCTGGCTCGAACAAGGCAGAGAAGTTTGACTATGTGATGGATTTCATCAAGAAGATGGCTGGTCAAGAGTACGTGGGGTTCAGCAATGCCACGTTCCAGTCTGAAAAAGAAACAGGCGACAGAAATTTTGCAATTGGATATTACCTCAAAGAGAAGAAGTGTTTTCCTCGTGGGGCAGAAATGATTGATGCACTGGACTTCTACTTCCAGCTGTGTTCCATAGAGGTGACCTGTGAGTCTGGGAGTGTCATGGCCGCCACGTTGGCCCATGGGGGCATCTGCCCAATCACAGGCGAGCGGGTGCTGAGTGCCGAGGCCGTACGGAATACCCTGAGTCTCATGCACTCCTGCGGCATGTACGACTTCTCTGGGCAGATGGCCTTCCATGTGGGCTTGCCTGCAAAGTCTGGGGTGTCTGGAGCGGTTCTGTTGGTTGTCCCTAACGTCATGGGAGTGATGTGTTGGTCACCTCCTTTAGACAAGGTTGGAAACAGTGTCCGAGGAATACACTTCTGCCAGGAGCTGGTGTCTTCGTTTAACTTCCACAACTATGACAACCTGAGACACTTTGTCAAGAAGCAGGACCCTCGAAGGCAGGACGGGGACGATAGGAACAAGTCTGTGGTGAACTTGATGTTTGCGGCCTACAGTGGAGACGTGTCAGCCCTCAGAAGgtTTGCTCTGTCCTCGATGGACATGGAGCTGAAAGACTATGACTCTAGGACAGCTCTACACGTGGCTGCAGCAGAAGGTCATGTAGAAGTGGTACGGTTCCTAACAGACACCTGCAAAGTGAACCCCTTTGTGAAAGATAGGTGGAGCAGCATTCCCCTGGACGATGCCCTGCAGTTTGGCCACGGTGCCGTGGTGAAGGTCTTACAGGAGTACCAGGTGGCTTGCCAGGAACAGGACAGACTACCAGTGGCTGATATCATCCCCATCCCCCCTAAACTAGAGACTGTAGAAGGCATGGTGTGATCAGGGGGGGGGACGTTGGGATCAGGCTCTACCATTAGAAGAGCTGATCTACCATCAGTTTTGCCGCAATGAAACAGATAATTATAGACAttgaggacctgatcctagatcagcactcctacttgaTAAATCATTAGGCCCCAAACGGAAGAAAACCTACTGAAACACGGAGGGACTTCAAGTCCAATAACAAACACTCATTTTAGTTTTCAGTTGCAAATGGTAGTGTCCGAAGTGGCACTCTATTTTATATAGGCCTTTAGTGCATTCGTTTTGGTTAGTAGTGTGTATAAGGAATGGGGATGCCATTAGGGACACAACCCTCAACACGCTTAGAAAAgggtatctagaacctaaaagggttcatcGGATGTCCCtattggagaaccctttgaagaaccctttttggttccaggtagaactcttttggggttccatgtagaacccttttccaCTGAGTGTTCTACATGgcacccaaaagggttcttctacttggaaccaaacaTTTTtaaacctggaaccaaaaagaacccttttggaacctttttttcccCCTAAGAGTTTATTGTTACTCCATCCCCCAGGACTTGTCTCTCTGACGTCCCTGGGTGTGTCCCAATAATATCTactttctcctgaagtgtacacttgttcactacttcccacaaatctaaaagcattggattggtggaggcgtGGGCTAGTGGGTGTTTCCACCTTATTTCTTATACCAGTCAGTGTTCTTCAAATCAGTGAAATGCACGctttgggaggaaggagagatctTTGGGACAGACTCCCTATCTTGTATGCAATATTTACTCCTCTCCTAGGCTGGATTTATATACAGGAGGACACCTGAGAGTGAGgctggacatgtacaggagacCTGTGAGTGAGTGTTGGAGAAGTTCAACATCGTGAGCGGGACGTTCAGTGTTCTATGACGAAATATTTGTCGACATTCTATTTTTCCTGACTAAAACTATGCCTATAACGAGACGAGGTGCCCTCGAAAATATAactatgacaaatgtttttcttCGTTTGAGTTGATGGAAATGTAACGAGATTTGACGTGACGCCCCTTTCTAATCTGTTTTGTCCAATCAGAAGCATGCATACCTTGGCAGAATATTTAATTAAATTCTCTTATTGGCTGATAACACCGGTCATGCGCCCGGGCTACTTGAGTTTATAGCCCTACCAGTCTTTCCAACACACACAGCTCCCAGGCGGTCGCTTCAATCGTCTATTTGTTTAACTGCTGCTCAGATAACTTCTAAATTGTAACTAACCTCTATTCTGTTAAGAAACAATCATGTTCATATTGGATATTTTTGACGTTGATCACATCCGAAGCTATACGTTGCCATTTGCGCTGCTATTCATTAGTGTTGCCGCTCTCACGGTACGCAAATAAAAGTCGCAGTGGCTTTTTTTCCGATTGGAAATACTACTGCTATTTACTGAATATCAGGAATACAGCAATAATTCTGTCTTCGTTGGAAAGCTCTGATTCTCCCCCTTTTTCAATCGAGTCACTGTTATTAAACCCCCTCTGGCGGTTATGATGGGTAGAAAACCACAGCTGTTAATTGGTTAACCTGTATCCAATCACGGCTATTGTTACTTCCACAATAGCAATTTTGCCAGCTACGTTATAGGAGGGTATACACACTATACTAGTAAGCCTAGTTGGACAAGGCTGAATAAGCACACGATCAAAGTTAGGGAGAAGACTAAAAATGTGTTATTTAGTGGAAAATGCATTGATTAAAATATCACTAAAACTACACAACAATTATCCAGTTTTAGTCGACTGATAGTTTCTAAAAGGATGAAATGGCTCaaatttgacaaaaaaaaaaaaatagctgaCAAAATGAATACTGCTGGTTACCAGTCTGTGTGCCATCAAGGCATAACACGTTTGGCACGACCAGGAGTGGACATGATAGCACACAcacatctgggaccagactacataTAAAGAGGCGAGTTGCCTTGGTAGTGTTTTTTAGCGAGGGGGACTTTTTGCCAATTAACACACAGCTGGTCTGTCAAGAAACAGCTTTGTCGTTCTCGTCTGTGCACTTGGTGTTTACGTGTATGCTGCATCAGAGAGCACCGTTGGCTTTGCGGTTTACCAGTGAAGATTAGCATTAGCTGATACATGAGGTTGTGCTACAAGGGCGCAACAGACAGACACTTCTAAGACCCAGTAATGATGACGGGGTTCAGATATC
>XM_036950910.1
tacacctgttgtattcagcatttcactgtaatgtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcgggtcatgtgactaataacatttgatttgcagAACCCTCATATTCAATAAGGCTGTTCTTATTGAAAGAACTGATGTCCATTATATGAACACAAATAATAAAACGAGACCAATTCATGATTTTGAAAGATTTTTTGGTTATATTCATCATTTAATAATTGCACAGAACATGTCTCTGTATACTCCTCGCCAGCCTATGTCATGACTTCTCCCTACATACCTCACTTGAGTTGCTCGAAGTATTTCAAAACATAGTCTACAGGTTGCAGCCAGCCCTTGAGTATTTGAATACGTTGTATCTTTGGCGCCAGACCTTGTGTTAATCATCTCCTAGAATGTGCTTGGTTGTAATTTCTCATTGGTCACTGTGCTGACCAATGCCCGACCTGACAATACTCAGACGTCGTCGCCAGAGCTCGCTGCTTGTGCGCTCACCGCGACAAGTTTAGAACGCGACAACAGGATTTGATCTGTATAACTGTTGTGGATTTGGCCAAAAACGGAACCATCAGACTGCGGAGAAATAGTTGGAAAGTAACGAAAATAACGAGAAGGTTTCCCGAAGGCAGTTATTCTCCTAGTCTGCTCTTATTTGTGTATAAAGTTGTAAACCATGCATTGTTTGAAAATATTACGGGTGACCAACGCAGCAGCTGTGCAAACCTTTGTGACAGACGCCACTAAAAAAGTGATCAAAAAGTGTTGTTATAACTGTTTATTACCGGGTTGTCATCGTACCGTTAAAATTCACTGTTTCAACACAAGTTCAACAGATCAGCACCGCATTGGAACAACCTCAGATATGGACCACGTGCTTCCCAAACTGAGCGGTGATGTAAAGGGTCTGTTCTCAGGAGTCGAAGATATGCTTTTCTACACCATTACAGACGGTCAGGAACAAGTCCCCGTCTCACACTTTATCTCTGCCCTGAAGAAAACTGGTCTTAATGCGTCAGACCCCCGACTGAAGGACTGTATGGACAAGCTGCAACGTTCCGTAACGGAGTCCTTTCATGACGTCATGATGGACCGGGAACTCTTCCACAAGTGTGTTGGTGGGAACATAGTGCTTCTGATTCAGGCCTTCAGAAAGAAGTTCATCATCCCCGAGTTTGATGCCTTTATAACAAAGATAGATCAAATCTACGACACCGTCCAGAAAAACCATGACGGACATGTAGCAGTCTACATTCCCCACCTGGCCAAGTTCAGTCCTGATCTCTggggtgtgtctctgtgtactgtAGATGGACAGAGACACTCAGTAGGAGAAAGCAAGCAGCCCTTCTGCCTCCAGTCGTGTGTGAAGCCTCTGGAGTATGCTGTGGCCATCCACGAGGCTGGGACAGAGAAGGTACACCGCTATGTGGGGATGGAGCCCAGCGGACTCAAGTTCAACAAGCTCTACCTGGATGAGGAAGACAAACCCCACAACCCCATGGTGAATGCTGGAGCCATTGTCATCAGCTCTCTTATCAAGCCTGGCTCGAACAAGGCAGAGAAGTTTGACTATGTGATGGATTTCATCAAGAAGATGGCTGGTCAAGAGTACGTGGGGTTCAGCAATGCCACGTTCCAGTCTGAAAAAGAAACAGGCGACAGAAATTTTGCAATTGGATATTACCTCAAAGAGAAGAAGTGTTTTCCTCGTGGGGCAGAAATGATTGATGCACTGGACTTCTACTTCCAGCTGTGTTCCATAGAGGTGACCTGTGAGTCTGGGAGTGTCATGGCCGCCACGTTGGCCCATGGGGGCATCTGCCCAATCACAGGCGAGCGGGTGCTGAGTGCCGAGGCCGTACGGAATACCCTGAGTCTCATGCACTCCTGCGGCATGTACGACTTCTCTGGGCAGATGGCCTTCCATGTGGGCTTGCCTGCAAAGTCTGGGGTGTCTGGAGCGGTTCTGTTGGTTGTCCCTAACGTCATGGGAGTGATGTGTTGGTCACCTCCTTTAGACAAGGTTGGAAACAGTGTCCGAGGAATACACTTCTGCCAGGAGCTGGTGTCTTCGTTTAACTTCCACAACTATGACAACCTGAGACACTTTGTCAAGAAGCAGGACCCTCGAAGGCAGGACGGGGACGATAGGAACAAGTCTGTGGTGAACTTGATGTTTGCGGCCTACAGTGGAGACGTGTCAGCCCTCAGAAGgtTTGCTCTGTCCTCGATGGACATGGAGCTGAAAGACTATGACTCTAGGACAGCTCTACACGTGGCTGCAGCAGAAGAAGTGGTACGGTTCCTAACAGACACCTGCAAAGTGAACCCCTTTGTGAAAGATAGGTGGAGCAGCATTCCCCTGGACGATGCCCTGCAGTTTGGCCACGGTGCCGTGGTGAAGGTCTTACAGGAGTACCAGGTGGCTTGCCAGGAACAGGACAGACTACCAGTGGCTGATATCATCCCCATCCCCCCTAAACTAGAGACTGTAGAAGGCATGGTGTGATCAGGGGGGGGGACGTTGGGATCAGGCTCTACCATTAGAAGAGCTGATCTACCATCAGTTTTGCCGCAATGAAACAGATAATTATAGACAttgaggacctgatcctagatcagcactcctacttgaTAAATCATTAGGCCCCAAACGGAAGAAAACCTACTGAAACACGGAGGGACTTCAAGTCCAATAACAAACACTCATTTTAGTTTTCAGTTGCAAATGGTAGTGTCCGAAGTGGCACTCTATTTTATATAGGCCTTTAGTGCATTCGTTTTGGTTAGTAGTGTGTATAAGGAATGGGGATGCCATTAGGGACACAACCCTCAACACGCTTAGAAAAgggtatctagaacctaaaagggttcatcGGATGTCCCtattggagaaccctttgaagaaccctttttggttccaggtagaactcttttggggttccatgtagaacccttttccaCTGAGTGTTCTACATGgcacccaaaagggttcttctacttggaaccaaacaTTTTtaaacctggaaccaaaaagaacccttttggaacctttttttcccCCTAAGAGTTTATTGTTACTCCATCCCCCAGGACTTGTCTCTCTGACGTCCCTGGGTGTGTCCCAATAATATCTactttctcctgaagtgtacacttgttcactacttcccacaaatctaaaagcattggattggtggaggcgtGGGCTAGTGGGTGTTTCCACCTTATTTCTTATACCAGTCAGTGTTCTTCAAATCAGTGAAATGCACGctttgggaggaaggagagatctTTGGGACAGACTCCCTATCTTGTATGCAATATTTACTCCTCTCCTAGGCTGGATTTATATACAGGAGGACACCTGAGAGTGAGgctggacatgtacaggagacCTGTGAGTGAGTGTTGGAGAAGTTCAACATCGTGAGCGGGACGTTCAGTGTTCTATGACGAAATATTTGTCGACATTCTATTTTTCCTGACTAAAACTATGCCTATAACGAGACGAGGTGCCCTCGAAAATATAactatgacaaatgtttttcttCGTTTGAGTTGATGGAAATGTAACGAGATTTGACGTGACGCCCCTTTCTAATCTGTTTTGTCCAATCAGAAGCATGCATACCTTGGCAGAATATTTAATTAAATTCTCTTATTGGCTGATAACACCGGTCATGCGCCCGGGCTACTTGAGTTTATAGCCCTACCAGTCTTTCCAACACACACAGCTCCCAGGCGGTCGCTTCAATCGTCTATTTGTTTAACTGCTGCTCAGATAACTTCTAAATTGTAACTAACCTCTATTCTGTTAAGAAACAATCATGTTCATATTGGATATTTTTGACGTTGATCACATCCGAAGCTATACGTTGCCATTTGCGCTGCTATTCATTAGTGTTGCCGCTCTCACGGTACGCAAATAAAAGTCGCAGTGGCTTTTTTTCCGATTGGAAATACTACTGCTATTTACTGAATATCAGGAATACAGCAATAATTCTGTCTTCGTTGGAAAGCTCTGATTCTCCCCCTTTTTCAATCGAGTCACTGTTATTAAACCCCCTCTGGCGGTTATGATGGGTAGAAAACCACAGCTGTTAATTGGTTAACCTGTATCCAATCACGGCTATTGTTACTTCCACAATAGCAATTTTGCCAGCTACGTTATAGGAGGGTATACACACTATACTAGTAAGCCTAGTTGGACAAGGCTGAATAAGCACACGATCAAAGTTAGGGAGAAGACTAAAAATGTGTTATTTAGTGGAAAATGCATTGATTAAAATATCACTAAAACTACACAACAATTATCCAGTTTTAGTCGACTGATAGTTTCTAAAAGGATGAAATGGCTCaaatttgacaaaaaaaaaaaaatagctgaCAAAATGAATACTGCTGGTTACCAGTCTGTGTGCCATCAAGGCATAACACGTTTGGCACGACCAGGAGTGGACATGATAGCACACAcacatctgggaccagactacataTAAAGAGGCGAGTTGCCTTGGTAGTGTTTTTTAGCGAGGGGGACTTTTTGCCAATTAACACACAGCTGGTCTGTCAAGAAACAGCTTTGTCGTTCTCGTCTGTGCACTTGGTGTTTACGTGTATGCTGCATCAGAGAGCACCGTTGGCTTTGCGGTTTACCAGTGAAGATTAGCATTAGCTGATACATGAGGTTGTGCTACAAGGGCGCAACAGACAGACACTTCTAAGACCCAGTAATGATGACGGGGTTCAGATATC

Function

NR:

description
glutaminase kidney isoform, mitochondrial-like

GO: NA

KEGG:

id description
K01425 glsA, GLS; glutaminase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036950909.1 False 4798 mRNA 0.45 18 87441839 87480286
XM_036950910.1 True 4789 mRNA 0.45 18 87441839 87480286

Neighbor

gene id symbol gene type direction distance location
LOC110519410 LOC106566157 coding upstream 651 87433711 ~ 87441188 (+)
LOC110494789 bloc1s1 coding upstream 9899 87415720 ~ 87486890 (+)
LOC110494792 LOC106566161 coding upstream 187764 87181451 ~ 87254075 (+)
nckap1l LOC106566166 coding upstream 269554 87134096 ~ 87172285 (+)
LOC110494793 LOC106566167 coding upstream 497013 86925395 ~ 86944826 (+)
LOC110494786 LOC106566159 coding downstream 28623 87508909 ~ 87515178 (+)
LOC110493299 LOC106566196 coding downstream 76510 87556796 ~ 88016164 (+)
LOC118940111 NA coding downstream 547310 88027596 ~ 88031324 (+)
LOC110493298 LOC106566194 coding downstream 555078 88035364 ~ 88073938 (+)
LOC110494817 LOC100136539 coding downstream 594109 88074395 ~ 88079956 (+)
G1501218 NA non-coding upstream 101381 87340152 ~ 87340458 (+)
G1501171 NA non-coding upstream 200478 87241130 ~ 87241361 (+)
G1501169 NA non-coding upstream 205242 87236383 ~ 87236597 (+)
G1501165 NA non-coding upstream 210217 87231335 ~ 87231622 (+)
G1501156 NA non-coding upstream 251564 87182060 ~ 87190275 (+)
G1501298 NA non-coding downstream 20954 87501240 ~ 87502220 (+)
G1501305 NA non-coding downstream 45854 87526140 ~ 87527748 (+)
G1501316 NA non-coding downstream 62013 87542299 ~ 87546185 (+)
G1501362 NA non-coding downstream 145877 87626163 ~ 87626792 (+)
G1501436 NA non-coding downstream 315829 87796115 ~ 87796473 (+)
G1501148 NA other upstream 272832 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 914809 86520830 ~ 86527030 (+)
G1500239 NA other upstream 1058294 86382298 ~ 86383545 (+)
G1500198 NA other upstream 1173664 86267328 ~ 86268175 (+)
G1499923 LOC106566127 other upstream 1729980 85625443 ~ 85711859 (+)
LOC110494816 LOC106566192 other downstream 609371 88089634 ~ 88143474 (+)
G1502352 NA other downstream 1289584 88769870 ~ 88800640 (+)
G1502370 NA other downstream 1326692 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 1625885 89106147 ~ 89150807 (+)
G1503119 NA other downstream 2288271 89768557 ~ 89786154 (+)

Expression


Co-expression Network