Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110494786 |
| gene name | LOC106566159 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 87508909 ~ 87515178 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| chymotrypsin-like elastase family member 1 |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K01326 | CELA1; pancreatic elastase I |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036950914.1 | True | 1016 | mRNA | 0.55 | 8 | 87508909 | 87515178 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494787 | LOC106566158 | coding | upstream | 28623 | 87441839 ~ 87480286 (+) |
| LOC110519410 | LOC106566157 | coding | upstream | 67721 | 87433711 ~ 87441188 (+) |
| LOC110494789 | bloc1s1 | coding | upstream | 76969 | 87415720 ~ 87486890 (+) |
| LOC110494792 | LOC106566161 | coding | upstream | 254834 | 87181451 ~ 87254075 (+) |
| nckap1l | LOC106566166 | coding | upstream | 336624 | 87134096 ~ 87172285 (+) |
| LOC110493299 | LOC106566196 | coding | downstream | 41618 | 87556796 ~ 88016164 (+) |
| LOC118940111 | NA | coding | downstream | 512418 | 88027596 ~ 88031324 (+) |
| LOC110493298 | LOC106566194 | coding | downstream | 520186 | 88035364 ~ 88073938 (+) |
| LOC110494817 | LOC100136539 | coding | downstream | 559217 | 88074395 ~ 88079956 (+) |
| LOC110494816 | LOC106566192 | coding | downstream | 574456 | 88089634 ~ 88143474 (+) |
| G1501298 | NA | non-coding | upstream | 6689 | 87501240 ~ 87502220 (+) |
| G1501218 | NA | non-coding | upstream | 168451 | 87340152 ~ 87340458 (+) |
| G1501171 | NA | non-coding | upstream | 267548 | 87241130 ~ 87241361 (+) |
| G1501169 | NA | non-coding | upstream | 272312 | 87236383 ~ 87236597 (+) |
| G1501165 | NA | non-coding | upstream | 277287 | 87231335 ~ 87231622 (+) |
| G1501305 | NA | non-coding | downstream | 10962 | 87526140 ~ 87527748 (+) |
| G1501316 | NA | non-coding | downstream | 27121 | 87542299 ~ 87546185 (+) |
| G1501362 | NA | non-coding | downstream | 110985 | 87626163 ~ 87626792 (+) |
| G1501436 | NA | non-coding | downstream | 280937 | 87796115 ~ 87796473 (+) |
| G1501437 | NA | non-coding | downstream | 282498 | 87797676 ~ 87798273 (+) |
| G1501148 | NA | other | upstream | 339902 | 87168539 ~ 87169007 (+) |
| G1500170 | LOC106566147 | other | upstream | 981879 | 86520830 ~ 86527030 (+) |
| G1500239 | NA | other | upstream | 1125364 | 86382298 ~ 86383545 (+) |
| G1500198 | NA | other | upstream | 1240734 | 86267328 ~ 86268175 (+) |
| G1502352 | NA | other | downstream | 1254692 | 88769870 ~ 88800640 (+) |
| G1502370 | NA | other | downstream | 1291800 | 88806978 ~ 88808969 (+) |
| LOC110493303 | LOC106566213 | other | downstream | 1590993 | 89106147 ~ 89150807 (+) |
| G1503119 | NA | other | downstream | 2253379 | 89768557 ~ 89786154 (+) |
