dnsl3 (dnsl3)


Basic Information

Item Value
gene id dnsl3
gene name dnsl3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88162116 ~ 88175346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001165127.1
agggagagagatggttatGTAGTGCAGTTCAGGCCATACAACGTTCTCTCTGAAGAGGATTTCTGCTGTTTACGAAAGGCATCAGAGCATCCTTCAACTCCTGGGTACATCTTCATAACACGCAATCATGAAGGTGGCGTCCTTCAACGTCAGAAGATTGGGCACAAGCAAAGTGGCTGATAAGAATGTCCTGAAATATCTCATCAAGATTGTGTCCCGTTACAGTGTCTTCTTGATCCTAGAAGTGGTTGATAGGACTGGCCAGGCCATGACAACGTTCCTTAAAGAGCTAAATGACACAAGGGCCAACAAGAAGCATCCTTACACCATGGTGAAGAGTACCAGACTGGGGCGCGACACCTACAAGGAACAGTTTGTCTTCCTCTACAGAGAGGACCATGTGAAGCTGACTGACAGCTATCAGTATAAGGACAACCAGGTGGGAGACGAGGACGCCTTCGCTAGAGAGCCCTACATCCTCCGCTTCACCTGTCTCAATACAGTGCTGAAAGACCTCGTGTTGATCCCGGTGCACACCAAGCCTGAAGACTCTGTGAAGGAATTGGATGAGCTGTACGACGTCGTGAAAGTAGTGAAGAGGAAGTGGAAGACTGATAACATCATGATCCTGGGCGATTTCAATGCGGACGGAAGTTATGTCACCAAGAAAGGCATGACGAATATCCGTATCCGTAGTGACAAGAAGTTCCACTGGGTGATTGGAGATGATGTGGACACCACAGCCAACACAAGCAACGACCACACCTACGACAGGATTGTGATGTACGGGGATGATATGTTGGAGGCGATGGTCCCCAACTCAGCCAAGCCCTTCAACTACCACAAAGCCTTTCACTTATCTGAAGCTATGGCTTTGAGTATCAGTGACCACTACCCTGTAGAGGTGGAGCTGACGACGGCTGAAACTGTACCACAGAAGAAAGAGGAAAAAGAGATAGAGGAAGTAGAGACTCCCAGTGTAAATCCAATACCACGGAAGAAGAAAAGACTCGTGAGAAAGTTAATAGGGAAGTCAAAACAAGCCTAGATGTATATAAATAATTATATTCTAACTGTAaatctgtttctgtttgtttcaaATGTTTCAAGTGCTTTACTTAATAAAGACCTACATGCAATATTCTATGTAGGAAATGTTATTTTACGATAAAACATTTTCTCAGTAAACC
>TU1717411
cagggagagagatggttatGTAGTGCAGTTCAGGCCATACAACGTTCTCTCTGAAGAGGATTTCTGCTGTTTACGAAAGGCATCAGAGCATCCTTCAACTCCTGGGTACATCTTCATAACACGCAATCATGAAGGTGGCGTCCTTCAACGTCAGAAGATTGGGCACAAGCAAAGTGGCTGATAAGAATGTCCTGAAATATCTCATCAAGATTGTGTCCCGTTACAGTGTCTTCTTGATCCTAGAAGTGGTTGATAGGACTGGCCAGGCCATGACAACGTTCCTTAAAGAGCTAAATGACACAAGGGCCAACAAGAAGCATCCTTACACCATGGTGAAGAGTACCAGACTGGGGCGCGACACCTACAAGGAACAGTTTGTCTTCCTCTACAGAGAGGACCATGTGAAGCTGACTGACAGCTATCAGTATAAGGACAACCAGGTGGGAGACGAGGACGCCTTCGCTAGAGAGCCCTACATCCTCCGCTTCACCTGTCTCAATACAGTGCTGAAAGACCTCGTGTTGATCCCGGTGCACACCAAGCCTGAAGACTCTGTGAAGGAATTGGATGAGCTGTACGACGTCGTGAAAGTAGTGAAGAGGAAGTGGAAGACTGATAACATCATGATCCTGGGCGATTTCAATGCGGACGGAAGTTATGTCACCAAGAAAGGCATGACGAATATCCGTATCCGTAGTGACAAGAAGTTCCACTGGGTGATTGGAGATGATGTGGACACCACAGCCAACACAAGCAACGACCACACCTACGACAGGATTGTGATGTACGGGGATGATATGTTGGAGGCGATGGTCCCCAACTCAGCCAAGCCCTTCAACTACCACAAAGCCTTTCACTTATCTGAAGCTATGGCTTTGAGTATCAGTGACCACTACCCTGTAGAGGTGGAGCTGACGACGGCTGAAACTGTACCACAGAAGAAAGAGGAAAAAGAGATAGAGGAAGTAGAGACTCCCAGTGTAAATCCAATACCACGGAAGAAGAAAAGACTCGTGAGAAAGTTAATAG
>TU1717412
ctgtatatactgcgtTGGTGGAAACATGCTTTGTCTAATGTATTgatcctctgggaagaataaacttggttaagctttcatAATGTCCGTAGAGTTTTTTACTCcgagaattagaacctaacacgTAACTCTGGCAGAGGTTTTTTTTCTGATCAGGTGATGTGGTCAGGAATTACTCCTAACCCCTACTACGGTACCTACTCCAGACTGTTCACAGTAGTTGGGAGTTGGGTTCTAGAACAATTCCTTTCAGGATATGACATGATGGCTCTATATCCTATAGTGCTGAAAGACCTCGTGTTGATCCCGGTGCACACCAAGCCTGAAGACTCTGTGAAGGAATTGGATGAGCTGTACGACGTCGTGAAAGTAGTGAAGAGGAAGTGGAAGACTGATAACATCATGATCCTGGGCGATTTCAATGCGGACGGAAGTTATGTCACCAAGAAAGGCATGACGAATATCCGTATCCGTAGTGACAAGAAGTTCCACTGGGTGATTGGAGATGATGTGGACACCACAGCCAACACAAGCAACGACCACACCTACGACAGGATTGTGATGTACGGGGATGATATGTTGGAGGCGATGGTCCCCAACTCAGCCAAGCCCTTCAACTACCACAAAGCCTTTCACTTATCTGAAGCTATGGCTTTGAGTATCAGTGACCACTACCCTGTAGAGGTGGAGCTGACGACGGCTGAAACTGTACCACAGAAGAAAGAGGAAAAAGAGATAGAGGAAGTAGAGACTCCCAGTGTAAATCCAATACCACGGAAGAAGAAAAGACTCGTGAGAAAGTTAATAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001165127.1 False 1190 mRNA 0.45 9 88162116 88175345
TU1717411 False 1029 TUCP 0.48 9 88162278 88175346
TU1717412 True 808 TUCP 0.45 4 88162278 88164542
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Neighbor

gene id symbol gene type direction distance location
LOC110493297 LOC106566189 coding downstream 3112 88144616 ~ 88159004 (-)
LOC110495200 LOC106566159 coding downstream 654528 87494104 ~ 87507588 (-)
itga7 LOC106566153 coding downstream 748562 87330714 ~ 87413554 (-)
npffl npff coding downstream 843005 87309425 ~ 87319111 (-)
LOC110494790 ppp1r1a coding downstream 865653 87260493 ~ 87296463 (-)
LOC110494815 NA coding upstream 6338 88181683 ~ 88183757 (-)
zgc:171566 LOC106566184 coding upstream 58339 88233684 ~ 88245505 (-)
LOC110494809 LOC106566197 coding upstream 261901 88437246 ~ 88600371 (-)
LOC110493292 NA coding upstream 697575 88872775 ~ 88877452 (-)
LOC118940510 LOC106566201 coding upstream 726513 88901858 ~ 88907675 (-)
G1502063 NA non-coding downstream 18708 88141454 ~ 88143408 (-)
G1502025 NA non-coding downstream 78532 88083384 ~ 88083584 (-)
G1502024 NA non-coding downstream 79010 88082801 ~ 88083106 (-)
G1502010 NA non-coding downstream 82121 88078423 ~ 88079995 (-)
G1502020 NA non-coding downstream 103491 88057432 ~ 88058625 (-)
G1502095 NA non-coding upstream 43686 88219031 ~ 88219950 (-)
G1502103 NA non-coding upstream 54286 88229631 ~ 88232062 (-)
G1502110 NA non-coding upstream 72048 88247393 ~ 88247610 (-)
G1502111 NA non-coding upstream 72566 88247911 ~ 88248323 (-)
G1501745 NA other downstream 766281 87394780 ~ 87395835 (-)
G1501650 LOC106566166 other downstream 1002872 87134058 ~ 87166800 (-)
LOC110493290 map3k12 other downstream 1355585 86798065 ~ 86880836 (-)
G1500834 LOC106566150 other downstream 1711382 86449679 ~ 86450734 (-)
LOC110494779 ddit3 other downstream 1919188 86236554 ~ 86242991 (-)
G1502489 NA other upstream 182807 88358152 ~ 88425505 (-)
G1502566 NA other upstream 375021 88550366 ~ 88552831 (-)
pcbp4 LOC106566209 other upstream 1400616 89575961 ~ 89725809 (-)
G1503624 NA other upstream 1511070 89686415 ~ 89686877 (-)

Expression

dnsl3(dnsl3) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 20.
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dnsl3(dnsl3) Expression in each Bioproject

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dnsl3(dnsl3) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network