LOC118940509


Basic Information

Item Value
gene id LOC118940509
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 88434348 ~ 88435516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037104.1
ttacaggtctatagtctatagtactggtctgtgtctttagttacaggtctatagtctatagtactggtctgtgtctttagtcacaggtctatagtctatagtactGGTCTGTGTCTTTAGTTACAGGTCTATAGTACTGGTCTGTGTCTTTAGTTacaggtctatagtctatagtactggtctgtgtctttagtcacaggtctatagtactggtctgtgtctttagttacaggtctataGTCTATAGTACTGGTCTGTGTCTTTAGTCacaggtctatagtctatagtactggtctgtgtctttagtcacaggtctatagtactggtctgtgtctttagtcacaggtctatagtctatagtactggtctgtgtctttagtcacaggtctatagtctatagtactggtctgtgtctttagtcacaggtctatagtactggtctgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037104.1 True 446 mRNA 0.40 3 88434348 88435516

Neighbor

gene id symbol gene type direction distance location
LOC110493294 LOC106566182 coding upstream 13122 88372078 ~ 88421226 (+)
LOC110493295 LOC106566198 coding upstream 200955 88203897 ~ 88233393 (+)
LOC110493296 mcm2 coding upstream 233603 88186354 ~ 88200745 (+)
LOC110494814 LOC106566185 coding upstream 248156 88183728 ~ 88186192 (+)
LOC110494816 LOC106566192 coding upstream 290874 88089634 ~ 88143474 (+)
LOC118940508 NA coding downstream 430 88435946 ~ 88436832 (+)
LOC118940163 NA coding downstream 171252 88606768 ~ 88617815 (+)
LOC118940112 NA coding downstream 231529 88667045 ~ 88668051 (+)
cand2 LOC106566202 coding downstream 442268 88877784 ~ 88897509 (+)
ssuh2.1 LOC106566200 coding downstream 477380 88912896 ~ 88965638 (+)
G1502180 NA non-coding upstream 10866 88421501 ~ 88423482 (+)
G1502175 NA non-coding upstream 85392 88348727 ~ 88348956 (+)
G1502171 NA non-coding upstream 87853 88346246 ~ 88346495 (+)
G1501649 NA non-coding upstream 93376 88340414 ~ 88340972 (+)
G1501647 NA non-coding upstream 97834 88335519 ~ 88336514 (+)
G1502212 NA non-coding downstream 22703 88458219 ~ 88458433 (+)
G1502218 NA non-coding downstream 37042 88472558 ~ 88472769 (+)
G1502220 NA non-coding downstream 40536 88476052 ~ 88476312 (+)
G1502222 NA non-coding downstream 43015 88478531 ~ 88478857 (+)
G1502223 NA non-coding downstream 44438 88479954 ~ 88480242 (+)
LOC110494789 bloc1s1 other upstream 947458 87415720 ~ 87486890 (+)
G1501148 NA other upstream 1265341 87168539 ~ 87169007 (+)
G1500170 LOC106566147 other upstream 1907318 86520830 ~ 86527030 (+)
G1500239 NA other upstream 2050803 86382298 ~ 86383545 (+)
G1502352 NA other downstream 334354 88769870 ~ 88800640 (+)
G1502370 NA other downstream 371462 88806978 ~ 88808969 (+)
LOC110493303 LOC106566213 other downstream 670655 89106147 ~ 89150807 (+)
G1503119 NA other downstream 1333041 89768557 ~ 89786154 (+)
G1503337 NA other downstream 1786029 90221545 ~ 90223659 (+)

Expression


Co-expression Network