LOC118940168


Basic Information

Item Value
gene id LOC118940168
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 93080347 ~ 93082272 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948448.1
ATGACGCTGGTAAAGAATGCCATTCCCGACACGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATCAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTTGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTGTAGGGATTAAGGTGCCCTTTAGGGACACAGCCATAACGGTCAACACTGATTTAACGTCCAAATACAACCGACATGGAaacgagagataagagagagaaaagactgaTCGTTTaattataaaataaaaacaattctcaTATTTGGTCGGGTGAAGAatctgtggtaaaaaaaaaaaaggcaacgGTTTCTTGCATTGAGTTTCTTCACCCGCTCTGTGAACTTGATAGGAAACGTTTTGATAGAACGTTTCTCCACTAAACTACATTTACACCGTATTCAGACATGTCATTTCTGGCTGTCATCGACAAgtacaaaatctgttgtttaaaaaaacataaatCAGAATAGGACTTTCTGTTTATCTGACAACACCGGTGTTTTGCACACTAAAGACTGGTAGCAGATGGGGACCGCTGTGCTTTCACCAACAGGTTACAAACATAAGCAACAACGGCCTGTGAAACAGTTTTTAACATGATTACTCTGGTAAATAAAGCGCTGGTAAAAAGAAAAGTAACTTCATGGAAATGACAGAGGTTTAATTTtatcctgggttgtgttcatcagGAAAAAAACGCTTTATGACTGAGGTTTAATTTgatcctgggttgtgttcatcag

Function

NR:

description
Salivary glue protein Sgs-4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948448.1 True 1441 mRNA 0.45 4 93080347 93082272

Neighbor

gene id symbol gene type direction distance location
LOC110494837 LOC106566237 coding downstream 26172 93042606 ~ 93054175 (-)
LOC118940167 LOC106566237 coding downstream 41988 93034702 ~ 93038359 (-)
LOC110494836 LOC106566241 coding downstream 149140 92902401 ~ 92931207 (-)
LOC110494834 NA coding downstream 243909 92828908 ~ 92836438 (-)
LOC118940649 NA coding downstream 247596 92832524 ~ 92832751 (-)
LOC110494849 LOC106566252 coding upstream 395173 93477445 ~ 93494951 (-)
LOC110493308 NA coding upstream 417928 93500200 ~ 93529938 (-)
LOC110494848 pdhb coding upstream 449418 93531690 ~ 93557343 (-)
LOC118940515 NA coding upstream 485543 93567815 ~ 93572808 (-)
LOC110494844 slmap coding upstream 495911 93577689 ~ 93690695 (-)
G1506975 NA non-coding downstream 21214 93058569 ~ 93059133 (-)
G1506621 NA non-coding downstream 49845 93002869 ~ 93030502 (-)
G1506605 NA non-coding downstream 90570 92986410 ~ 92989777 (-)
G1506565 NA non-coding downstream 140340 92939767 ~ 92940007 (-)
G1506561 NA non-coding downstream 142352 92937775 ~ 92937995 (-)
G1506996 NA non-coding upstream 29438 93111710 ~ 93111982 (-)
G1506997 NA non-coding upstream 29849 93112121 ~ 93112711 (-)
G1506998 NA non-coding upstream 30664 93112936 ~ 93120114 (-)
G1507007 NA non-coding upstream 53940 93136212 ~ 93138244 (-)
G1507034 NA non-coding upstream 100159 93182431 ~ 93183959 (-)
G1506965 NA other downstream 35982 93043731 ~ 93044365 (-)
G1506543 NA other downstream 216373 92863102 ~ 92863974 (-)
G1506231 NA other downstream 581399 92494406 ~ 92498948 (-)
G1506160 NA other downstream 740904 92338053 ~ 92339443 (-)
G1506957 NA other upstream 3410 93085682 ~ 93088708 (-)
G1507093 NA other upstream 324021 93406293 ~ 93407212 (-)
G1507961 timp4 other upstream 1081818 94164090 ~ 94198079 (-)
phf2 phf2 other upstream 1779354 94861445 ~ 94996238 (-)

Expression


Co-expression Network