XLOC_003343 (grin3bb)


Basic Information

Item Value
gene id XLOC_003343
gene name grin3bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 14004236 ~ 14064984 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006542
AATCGTTTCCACTTGCAGATGACGACTCGTATTCCTCCATCGGGATTAGTGGAGCTACTTCTGGCCGTTTTGCAGCGCAGTGGCTGGGAAGAGAGCATGGCAGTTCTTTGCCATGGTTGGGAGGATGCTGGTCTTCTGGATCTCCTAAAACTCCAAGGCCGCTTTGGCTGGGGACCTTCACAATGGCACCTGCGGGCCGCTCTTAATCTCTCTCACAGCACAGCTCGCATGGCTAACATTTCTGACTTCCTGTCTGAGCACTTTAATCTGGACCATTCTCCTCCTGCCTCAGTCCTGCTTTTTGGGGCTGACCCGGAGTGTGCCTCATCAGTTCTGCGCAGCGCGCATGACCTGGGGTTGACATTGCCCACTGTACATTGGATTATGGGACATCCTTTAAGCCCAGATGCTCTTCATTCCATTGGCCTGCCTTTAGGACTGCTGGCCTATGGAGAGGTCGACCACAAACCACTGGATTTCTACATTAGTGATGCCCTGCAGTTGATCAACAGAGCTGTTACAGCTGCAACTGTTGTACGGCCTGATCTAGCTCTTATCCAAAATATGGTCAACTGTTTTGACAAACCCAACAAACACGAACTACCCTCATCAGGACAATACATTGCCAGGTTCCTCTCTAATACATCCTTTGTAGGGTTGACAGGCCCTGTCATCGTTCAACGCAACCTTTCTCGTGTACACACGTCTCATAAGGTCCACATTTGGAGTCTTCGACGGGATGCCGTCGGTCAGCCTACGTGGGTAACTGTAGGTAGCTGGGAAGGTGGTAGGTTGAATGTGGAGGAACAGGGCTTATGGCAAGGCTCATCACCTCGGCAGCGCACGGAGGGCCAGATGGGCAGGGAAGGACGTAGATGGCGAGCTGGCTTTCCTGTGTCTGGGAGTCGTCTACGTGTGGTCACTCTGGTGGAGCACCCGTTCGTGTTCACTCGAGAGGTAGATGAGGATGGAAACTGTCCTGCTGGGCAATATTGTCTGGATGCAGGAACAAACAGTTCAGAAACCTTAGATCATTTGTACGCTGAGCGGGCTCAAGGCAACAAAAGCTTCTTGCCACCGGATTACAGCAAGTGTTGCTACGGATACTGTATTGATTTATTGGAGAAGCTGTCAGAAGACATGAACTTTGAGTTTGACCTGTACATAGTTGGAGATGGGAAATATGGGGCTGTCAAGGGAGGGCAGTGGACAGGTCTGGTGGGTGACCTCTTAAGTGGAGTAGCTGATATGGCTGTTACCAGTTTTAGCATCAACTCGGCTCGCAGTAAGGTGATTGATTTCACTAGTCCATTCTTTTCAACAAGTTTGGGAATACTGGTGCGCAGTAAAGACACAGCAGCACCTATTGGAGCATTCATGTGGCCTTTACACTGGTCCATGTGGATGGGAATTTTTGTGGCGCTGCACATTACAGCACTGTTCCTCACTCTCTACGAATGGAAGAGTCCCTTCGGCATGACGCCTCATGGACGAAACCGTGTAAAGGTCTTTTCCTATTCTTCAGCCCTCAACCTCTGCTACGCCATCCTCTTTGGCCGCACAGTCTCTAGTAAGACACCAAAGTGTTGGACTGGACGTTTCCTCATGAATCTATGGGCCATATTTTGCCTGCTGGTTTTGTCCAGTTACACAGCAAACCTAGCTGCAGTGATGGTTGGGGAAAAGACCTTTGAAGAAGTGTCGGGAATACATGATGCCAAGGGATTCCGATTTGGCACAGTTCGGGAAAGCAGTGCAGAGGATTATATGAAAAAGAGCTTTCCTGAGATGCACGAATATATGCGGAAATTCAATGAACCTACCACACCTGATGGAGTCGCCACTCTAAAgacagatccgCCTCAACTTGATGCGTTTATCATGGACAAAGCCCTGCTGGACTATGAGGTGTCCATTGATGCTGACTGCAAGTTACTGACAGTTGGTAAACCCTTTGCAATTGAAGGCTACGGGATCGGTCTTCCCCAGAACTCACCTCTAACCTCCAACATATCTGAATTCGTCAGCCGTTACAAGTCAGATGGCTACATGGACATGCTGCATGACAAGTGGTACAAGGTGGTGCCGTGCGGAAAGAGAGTTTTTGCTGTTACCGAGACACTGCAGATGGGGATTCGTCACTTCTCAGGGTTATTTGTGTTGCTGTGTGTTGGTGTGACTGGGGCCTTACTTACTCTGGCAGGAGAGCATGCCTTCTATCGCCTGGTTCTTCCACATATACGCCGCAAACAGAAGTTCAAATACTGGCTTCATACTAGTCAGaaaatcCACAGAGCACTGAACATGACTTACGAGGATGTGAAACGGCAGCGGGCAAACACAGAGAAAagcTGTAACATTCAGAAAGCCCAGCCGCATCCTCCACCTCAACCTGCTCCGCTTGGATCATTTGCCAGGTGGAACAACGAGAGTGCCAAGGTAGCACAGGAGCCTAAAGACAACAAGAGGGTCCATTTCAACCTGGAGACCCTCAACACCCGTCGACTCCTCCCCCGAGTTGTGTCAGACGGGGGCCAAACCAGCTCCGCCTCCACGTTGAGTTCTGGGGCTGGGAGTTTATTGGCGAGAGTGTGTGAAAATGGGGGGCCTGTTCAGCGGGCCACCTCGTcagtgagatcctcgagcccctCCGGACAGGACGAGCTGGAGGAGCTCCAGACGAAGATTGAGGAAATCCGTGGACATTTGAAAGCTGCTCTGGCTCGCAGGGCTGAACTTCAGACAACACTGGCTAAAGAGAGAGCGGCTGCTGCTCTCACCACGGCAACAACGACTGCTCCGCCCACAGTCACAGCTACCATTTGCCCCGCCCTCACCAAAGAGCCGACAGATTTAAAAAGGTGATGCTCACATTACGAGCAGTATGAACATTGTTAAAATGGACATGTTTTTTTAGCGTTTGCcttcaaaaaaaaaggaaaaaaaacaccaGGACTCTTTTAAAATATCATGCTAAGGCAGCTTTGATCCTTGGTACAGTTATTACGCTAATAGAGCCTCATGTTACATCTTCTGAAGCATCTCTACAACtcctgttaaagggatagttcacccctaaaatttaagtttactcactatttactcaccttcatgtggttaaaaacagaggaagaaaaaaaCTTGTAAGCTTTGAcgtataatattaaaaaacaaatactatgaaaattaatgcccacatagcaaaatttctctagCCCAGAtatggcccacacaatcagcttttgcttggcccacattctgcagtgaattacggaacatgattggaccaagtctggcttccatacaagggccAAGCATGAACCACGGCCAaatctcagccaagttaataaccagggcttgacattaacttttttgatcaccagccactgtggctagtagatttccaacattactagccactcaccattttcactagccacatatttcttgttggaaaaatatattttgcttaaatttgactttgacatgctaaattatttgatttagatattgtgttgtccacatgccttctcattcattcatcaacTTTTTGTGCttattgtgtattagcttgctcagtgtgcatgagcaaatgggtcgtGTCACAACGCAATGATTTTTTATTCCACAActttttcagagctcaaaattaaggatttaccaaatttatttcTGACCACagcaaataagtatttcttagccacaattgtttatgtgtaaaaacaaggaaaatatagctGAATAGGTGCACTTTTAATTCAAcaaattttttctttaaaaaaaatattacattcaaaacattacatttaaaaaaataattattgtcatgtatctaaaatattcatagtaatctgtcctggctaaaagtcccagatcaccagttaactacacatgaACGGGGAGTAAtatcccattaaagcaatgttattgtaaaaaatgataattaaaccatattaacaaaaataactgtaagcaaaagaaagcaggtgaaacatactgTGCACACGGTTAATGTTAGGAATGTTAATAATCTCCTCtaagaataattcaaatgaaagcaGTGATCGCTGCTGCTCACAAAagaatatgtgcattttttttttatcttgagctcttgaaagcagcaggactgtgggtgcacgatcggcactctttgtccagtctatttcaaagggaaccaatcgcaccagttgcgcttcctctaggcacagttgctttgcgcaagtaaacgggagcgtgggcacgctttttaacagtcgcacgcatcacatcagctgttagcgcgagtgatcatgCTTTCTTTCTGTATTCaccagttatttttgtcagtcgtgctgcttcttgattttaatatcacatttgcacaaatattgggccatgcttattgtcaaaccctgcttttaggaaaactaccatttaaaaatgatttccaaccagccaaagtggctagtggaggtgtttGTCTAATCCGCCACAgatgaaatctacccgcatttggcgggttggcgggtgttaatgtaaagccctgttaaTAACCCATAATTGGGCCTGAACTGAACCAGATATGTAGATGTGTCACAactgcaatgaatttgataaaccaatgaagcattttgttttatcacttttctttatatatttattcctttacttaaaaataattttaatgtttttaaaagtgggtcaagataagccaaacttacatggcccacatatactGTTACCTGGGTGGTAACAGATTTCcagatttcttcaaaaatatccccttgtgtttaaaagatgaaaGAAAGTCAGACAGTAACTTAAAAGGacagtaaataatggcagaatgcTAATTTTTGAAAGAACTATTCGTTCACATTTGCAGGTAGAAACCTAAAGAACAAACGCTAGAAGGTTGAAGGCACCATGAAAGTCCATGCTGTACTCTCAGAGCTTTATTTATTCACATCCCAGAAGGACGTTTCCCCTTGGCCAGCTGTGGATATGGATCAAAATAAACCCCTGTTGCACCCAGAGCCTCATTGCAGAGTCAGAGGTAGAACAGAACATTGATTTTGCTGCTTTAGCAATGGTTTTATAGCTTGTTTTTGTCTGATCAAAAAAATTGCTATTGTTATTGATCTTTTATCCTCCATGAAGTAATATGGGCATATGAATGGCCAGGATGCCTGTTTGAATCAAGTTTGATGTTAAAGAAATAAATGTGATCTTGTCATAAATTGGATTCCTTGCATGAAAAGACTTCACACCAGAGAGTTGTgtagataaatatattttttttaggattttgtTGTTGAATTTTTTTCGTTGTATATGAAAAACATTTTGATGGATGAAACAAACTCCAAAAATTTGTGTCAGAAGCACATTTAACACTGTGTTAAATAAACTTTGTTTAAAACGTT
>TCONS_00006543
TTCCACTTGCAGATGACGACTCGTATTCCTCCATCGGGATTAGTGGAGCTACTTCTGGCCGTTTTGCAGCGCAGTGGCTGGGAAGAGAGCATGGCAGTTCTTTGCCATGGTTGGGAGGATGCTGGTCTTCTGGATCTCCTAAAACTCCAAGGCCGCTTTGGCTGGGGACCTTCACAATGGCACCTGCGGGCCGCTCTTAATCTCTCTCACAGCACAGCTCGCATGGCTAACATTTCTGACTTCCTGTCTGAGCACTTTAATCTGGACCATTCTCCTCCTGCCTCAGTCCTGCTTTTTGGGGCTGACCCGGAGTGTGCCTCATCAGTTCTGCGCAGCGCGCATGACCTGGGGTTGACATTGCCCACTGTACATTGGATTATGGGACATCCTTTAAGCCCAGATGCTCTTCATTCCATTGGCCTGCCTTTAGGACTGCTGGCCTATGGAGAGGTCGACCACAAACCACTGGATTTCTACATTAGTGATGCCCTGCAGTTGATCAACAGAGCTGTTACAGCTGCAACTGTTGTACGGCCTGATCTAGCTCTTATCCAAAATATGGTCAACTGTTTTGACAAACCCAACAAACACGAACTACCCTCATCAGGACAATACATTGCCAGGTTCCTCTCTAATACATCCTTTGTAGGGTTGACAGGCCCTGTCATCGTTCAACGCAACCTTTCTCGTGTACACACGTCTCATAAGGTCCACATTTGGAGTCTTCGACGGGATGCCGTCGGTCAGCCTACGTGGGTAACTGTAGGTAGCTGGGAAGGTGGTAGGTTGAATGTGGAGGAACAGGGCTTATGGCAAGGCTCATCACCTCGGCAGCGCACGGAGGGCCAGATGGGCAGGGAAGGACGTAGATGGCGAGCTGGCTTTCCTGTGTCTGGGAGTCGTCTACGTGTGGTCACTCTGGTGGAGCACCCGTTCGTGTTCACTCGAGAGGTAGATGAGGATGGAAACTGTCCTGCTGGGCAATATTGTCTGGATGCAGGAACAAACAGTTCAGAAACCTTAGATCATTTGTACGCTGAGCGGGCTCAAGGCAACAAAAGCTTCTTGCCACCGGATTACAGCAAGTGTTGCTACGGATACTGTATTGATTTATTGGAGAAGCTGTCAGAAGACATGAACTTTGAGTTTGACCTGTACATAGTTGGAGATGGGAAATATGGGGCTGTCAAGGGAGGGCAGTGGACAGGTCTGGTGGGTGACCTCTTAAGTGGAGTAGCTGATATGGCTGTTACCAGTTTTAGCATCAACTCGGCTCGCAGTAAGGTGATTGATTTCACTAGTCCATTCTTTTCAACAAGTTTGGGAATACTGGTGCGCAGTAAAGACACAGCAGCACCTATTGGAGCATTCATGTGGCCTTTACACTGGTCCATGTGGATGGGAATTTTTGTGGCGCTGCACATTACAGCACTGTTCCTCACTCTCTACGAATGGAAGAGTCCCTTCGGCATGACGCCTCATGGACGAAACCGTGTAAAGGTCTTTTCCTATTCTTCAGCCCTCAACCTCTGCTACGCCATCCTCTTTGGCCGCACAGTCTCTAGTAAGACACCAAAGTGTTGGACTGGACGTTTCCTCATGAATCTATGGGCCATATTTTGCCTGCTGGTTTTGTCCAGTTACACAGCAAACCTAGCTGCAGTGATGGTTGGGGAAAAGACCTTTGAAGAAGTGTCGGGAATACATGATGCCAAGCTTCATCACCCCTCTCAGGGATTCCGATTTGGCACAGTTCGGGAAAGCAGTGCAGAGGATTATATGAAAAAGAGCTTTCCTGAGATGCACGAATATATGCGGAAATTCAATGAACCTACCACACCTGATGGAGTCGCCACTCTAAAgacagatccgCCTCAACTTGATGCGTTTATCATGGACAAAGCCCTGCTGGACTATGAGGTGTCCATTGATGCTGACTGCAAGTTACTGACAGTTGGTAAACCCTTTGCAATTGAAGGCTACGGGATCGGTCTTCCCCAGAACTCACCTCTAACCTCCAACATATCTGAATTCGTCAGCCGTTACAAGTCAGATGGCTACATGGACATGCTGCATGACAAGTGGTACAAGGTGGTGCCGTGCGGAAAGAGAGTTTTTGCTGTTACCGAGACACTGCAGATGGGGATTCGTCACTTCTCAGGGTTATTTGTGTTGCTGTGTGTTGGTGTGACTGGGGCCTTACTTACTCTGGCAGGAGAGCATGCCTTCTATCGCCTGGTTCTTCCACATATACGCCGCAAACAGAAGTTCAAATACTGGCTTCATACTAGTCAGaaaatcCACAGAGCACTGAACATGACTTACGAGGATGTGAAACGGCAGCGGGCAAACACAGAGAAAaggttttgtctttgttttatttatctgttttataAGCATCAGAATTGTCCATATTACAACTGA
>TCONS_00006544
gcggATGTTGCGAGTGAGTGGGCGGAGGCggtgtgagagtgtgtttgcAGCGCGAACACTGCAGATGGGGATTCGTCACTTCTCAGGGTTATTTGTGTTGCTGTGTGTTGGTGTGACTGGGGCCTTACTTACTCTGGCAGGAGAGCATGCCTTCTATCGCCTGGTTCTTCCACATATACGCCGCAAACAGAAGTTCAAATACTGGCTTCATACTAGTCAGaaaatcCACAGAGCACTGAACATGACTTACGAGGATGTGAAACGGCAGCGGGCAAACACAGAGAAAagcTGTAACATTCAGAAAGCCCAGCCGCATCCTCCACCTCAACCTGCTCCGCTTGGATCATTTGCCAGGTGGAACAACGAGAGTGCCAAGGTAGCACAGGAGCCTAAAGACAACAAGAGGGTCCATTTCAACCTGGAGACCCTCAACACCCGTCGACTCCTCCCCCGAGTTGTGTCAGACGGGGGCCAAACCAGCTCCGCCTCCACGTTGAGTTCTGGGGCTGGGAGTTTATTGGCGAGAGTGTGTGAAAATGGGGGGCCTGTTCAGCGGGCCACCTCGTcagtgagatcctcgagcccctCCGGACAGGACGAGCTGGAGGAGCTCCAGACGAAGATTGAGGAAATCCGTGGACATTTGAAAGCTGCTCTGGCTCGCAGGGCTGAACTTCAGACAACACTGGCTAAAGAGAGAGCGGCTGCTGCTCTCACCACGGCAACAACGACTGCTCCGCCCACAGTCACAGCTACCATTTGCCCCGCCCTCACCAAAGAGCCGACAGATTTAAAAAGGTGATGCTCACATTACGAGCAGTATGAACATTGTTAAAATGGACATGTTTTTTTAGCGTTTGCcttcaaaaaaaaaggaaaaaaaacaccaGGACTCTTTTAAAATATCATGCTAAGGCAGCTTTGATCCTTGGTACAGTTATTACGCTAATAGAGCCTCATGTTACATCTTCTGAAGCATCTCTACAACtcctgttaaagggatagttcacccctaaaatttaagtttactcactatttactcaccttcatgtggttaaaaacagaggaagaaaaaaaCTTGTAAGCTTTGAcgtataatattaaaaaacaaatactatgaaaattaatgcccacatagcaaaatttctctagCCCAGAtatggcccacacaatcagcttttgcttggcccacattctgcagtgaattacggaacatgattggaccaagtctggcttccatacaagggccAAGCATGAACCACGGCCAaatctcagccaagttaataaccagggcttgacattaacttttttgatcaccagccactgtggctagtagatttccaacattactagccactcaccattttcactagccacatatttcttgttggaaaaatatattttgcttaaatttgactttgacatgctaaattatttgatttagatattgtgttgtccacatgccttctcattcattcatcaacTTTTTGTGCttattgtgtattagcttgctcagtgtgcatgagcaaatgggtcgtGTCACAACGCAATGATTTTTTATTCCACAActttttcagagctcaaaattaaggatttaccaaatttatttcTGACCACagcaaataagtatttcttagccacaattgtttatgtgtaaaaacaaggaaaatatagctGAATAGGTGCACTTTTAATTCAAcaaattttttctttaaaaaaaatattacattcaaaacattacatttaaaaaaataattattgtcatgtatctaaaatattcatagtaatctgtcctggctaaaagtcccagatcaccagttaactacacatgaACGGGGAGTAAtatcccattaaagcaatgttattgtaaaaaatgataattaaaccatattaacaaaaataactgtaagcaaaagaaagcaggtgaaacatactgTGCACACGGTTAATGTTAGGAATGTTAATAATCTCCTCtaagaataattcaaatgaaagcaGTGATCGCTGCTGCTCACAAAagaatatgtgcattttttttttatcttgagctcttgaaagcagcaggactgtgggtgcacgatcggcactctttgtccagtctatttcaaagggaaccaatcgcaccagttgcgcttcctctaggcacagttgctttgcgcaagtaaacgggagcgtgggcacgctttttaacagtcgcacgcatcacatcagctgttagcgcgagtgatcatgCTTTCTTTCTGTATTCaccagttatttttgtcagtcgtgctgcttcttgattttaatatcacatttgcacaaatattgggccatgcttattgtcaaaccctgcttttaggaaaactaccatttaaaaatgatttccaaccagccaaagtggctagtggaggtgtttGTCTAATCCGCCACAgatgaaatctacccgcatttggcgggttggcgggtgttaatgtaaagccctgttaaTAACCCATAATTGGGCCTGAACTGAACCAGATATGTAGATGTGTCACAactgcaatgaatttgataaaccaatgaagcattttgttttatcacttttctttatatatttattcctttacttaaaaataattttaatgtttttaaaagtgggtcaagataagccaaacttacatggcccacatatactGTTACCTGGGTGGTAACAGATTTCcagatttcttcaaaaatatccccttgtgtttaaaagatgaaaGAAAGTCAGACAGTAACTTAAAAGGacagtaaataatggcagaatgcTAATTTTTGAAAGAACTATTCGTTCACATTTGCAGGTAGAAACCTAAAGAACAAACGCTAGAAGGTTGAAGGCACCATGAAAGTCCATGCTGTACTCTCAGAGCTTTATTTATTCACATCCCAGAAGGACGTTTCCCCTTGGCCAGCTGTGGATATGGATCAAAATAAACCCCTGTTGCACCCAGAGCCTCATTGCAGAGTCAGAGGTAGAACAGAACATTGATTTTGCTGCTTTAGCAATGGTTTTATAGCTTGTTTTTGTCTGATCAAAAAAATTGCTATTGTTATTGATCTTTTATCCTCCATGAAGTAATATGGGCATATGAATGGCCAGGATGCCTGTTTGAATCAAGTTTGATGTTAAAGAAATAAATGTGATCTTGTCATAAATTGGATTCCTTGCATGAAAAGACTTCACACCAGAGAGTTGTgtagataaatatattttttttaggattttgtTGTTGAATTTTTTTCGTTGTATATGAAAAACATTTTGATGGATGAAACAAACTCCAAAAAT
>TCONS_00006545
GTCGGGTATTCTCTCTACGTTGATGTCTGTCTTCATTCCATGGTCTTCCTGAGTTCATCTCCcTGTAACATTCAGAAAGCCCAGCCGCATCCTCCACCTCAACCTGCTCCGCTTGGATCATTTGCCAGGTGGAACAACGAGAGTGCCAAGGTAGCACAGGAGCCTAAAGACAACAAGAGGGTCCATTTCAACCTGGAGACCCTCAACACCCGTCGACTCCTCCCCCGAGTTGTGTCAGACGGGGGCCAAACCAGCTCCGCCTCCACGTTGAGTTCTGGGGCTGGGAGTTTATTGGCGAGAGTGTGTGAAAATGGGGGGCCTGTTCAGCGGGCCACCTCGTcagtgagatcctcgagcccctCCGGACAGGACGAGCTGGAGGAGCTCCAGACGAAGATTGAGGAAATCCGTGGACATTTGAAAGCTGCTCTGGCTCGCAGGGCTGAACTTCAGACAACACTGGCTAAAGAGAGAGCGGCTGCTGCTCTCACCACGGCAACAACGACTGCTCCGCCCACAGTCACAGCTACCATTTGCCCCGCCCTCACCAAAGAGCCGACAGATTTAAAAAGGTGATGCTCACATTACGAGCAGTATGAACATTGTTAAAATGGACATGTTTTTTTAGCGTTTGCcttcaaaaaaaaaggaaaaaaaacaccaGGACT

Function

symbol description
grin3bb Predicted to enable ligand-gated ion channel activity and signaling receptor activity. Predicted to contribute to NMDA glutamate receptor activity. Predicted to be involved in ionotropic glutamate receptor signaling pathway. Predicted to act upstream of or within ion transport. Predicted to be located in postsynaptic membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human GRIN3B (glutamate ionotropic receptor NMDA type subunit 3B).

GO:

id name namespace
GO:0035235 ionotropic glutamate receptor signaling pathway biological_process
GO:0006811 ion transport biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0015276 ligand-gated ion channel activity molecular_function
GO:0005216 ion channel activity molecular_function
GO:0004970 ionotropic glutamate receptor activity molecular_function
GO:0004972 NMDA glutamate receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131122-77 Predicted to enable ligand-gated ion channel activity and signaling receptor activity. Predicted to contribute to NMDA glutamate receptor activity. Predicted to be involved in ionotropic glutamate receptor signaling pathway. Predicted to act upstream of or within ion transport. Predicted to be located in postsynaptic membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human GRIN3B (glutamate ionotropic receptor NMDA type subunit 3B).

Ensembl:

ensembl_id ENSDARG00000098667

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006542 False 5408 mRNA 0.44 8 14004236 14064984
TCONS_00006543 False 2424 mRNA 0.49 7 14004242 14055849
TCONS_00006544 False 3292 mRNA 0.40 4 14049131 14064931
TCONS_00006545 True 668 mRNA 0.53 2 14057605 14062533

Neighbor

gene id symbol gene type direction distance location
XLOC_003342 AL928649.1 coding upstream 139272 13864846 ~ 13864964 (+)
XLOC_003341 CR555295.2 coding upstream 186552 13817569 ~ 13817684 (+)
XLOC_003340 wdr18 coding upstream 214785 13642157 ~ 13789451 (+)
XLOC_003339 si:ch211-1a19.3 coding upstream 363765 13629528 ~ 13640471 (+)
XLOC_003338 arrdc2 coding upstream 470454 13524504 ~ 13533782 (+)
XLOC_003344 CT956066.1 coding downstream 16556 14081540 ~ 14082177 (+)
XLOC_003345 med16 coding downstream 39433 14104417 ~ 14143702 (+)
XLOC_003346 plppr3b coding downstream 82929 14147913 ~ 14161975 (+)
XLOC_003347 palm1a coding downstream 134818 14199802 ~ 14267855 (+)
XLOC_003348 si:ch211-262i1.3 coding downstream 215614 14280598 ~ 14293026 (+)
XLOC_003318 CR450764.6 misc upstream 1292240 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 1309973 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 1318637 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 1324208 12679732 ~ 12680028 (+)
XLOC_003314 CR450764.9 misc upstream 1380385 12623555 ~ 12623851 (+)
XLOC_003369 CR854846.2 misc downstream 2057802 16122786 ~ 16123082 (+)
XLOC_003332 NA non-coding upstream 809639 13193723 ~ 13194597 (+)
XLOC_003329 CR847923.1 non-coding upstream 851851 13151919 ~ 13152385 (+)
XLOC_003322 NA non-coding upstream 1219177 12782215 ~ 12785059 (+)
XLOC_003353 BX571942.1 non-coding downstream 366289 14431273 ~ 14640317 (+)
XLOC_003355 CU019562.3 non-coding downstream 797302 14862286 ~ 14863542 (+)
XLOC_003356 CU019562.2 non-coding downstream 837725 14902709 ~ 14904977 (+)
XLOC_003358 CR550302.2 non-coding downstream 952201 15017185 ~ 15018524 (+)

Expression


Co-expression Network