G1413291


Basic Information

Item Value
gene id G1413291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 1113834 ~ 1114703 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1615357
GGGGGAAAGAATGTCaactatgcacttaaatagcaaaatggaggacgcttttccccgtGGTTCAtcttcatgccagccaggtaggctatactcctgttgtaaagagaagcaatgtgcttaatattaggaaagtttatAAATAtaataggcctagcctatagaaagctgatgggatcctcctctttttaatagaggccatcactctgttttctcacgcagttacatagcctatagaaatgttgcgcaacatgagctcatgggctctcatgaagtgttttgatGAGATGTTATAATACGTTTACATTGATGTCAAGAGTTATTTAAAGGGACGATacagtgctgagtaccaggcagttagttTGGTAGGTTACTAATGACCATCGGTAGCATCAGAGACGCCTAATTACCGTGTCTAAActgtcacgtggaatttgactgtctTCGTGACTAGTGACCTCTGGTCTGGTGGTAATACCGTCACCTTGACAACCCCTCCATGTTGGCAGATCTAGGGACAAGATGACTGAGGTTACCAAAGATAAAACGGCTGAATGTAGAACTATATACAGCcgacttcctgtatacagccgaCTTCCTATCATTGGACCATTGGAGAAGGGCCCAATCCCAAGTTGACATCTAGACCTTATGCACTTGTGGAGATGTAAGATAATCTAATTGGTTGTAAGCAATATGGGTTTACTTCCACCTAGCCTATCATTGCGTGGTAGAGCTATtaccatattgcttacacctgACAAAACCTCTCCGATCTCCACAAGTGCATATGGCATAGGGTCTAGGGGGCGTTTAGGATTGGGCCCATTGGGTCAATGTGTCTTTATTTCTGGTTTTAAAAGACTTGTCAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1615357 True 870 lncRNA 0.43 1 1113834 1114703

Neighbor

gene id symbol gene type direction distance location
LOC118940051 LOC105005642 coding downstream 294100 797566 ~ 819734 (-)
iqce LOC106590476 coding downstream 497703 594071 ~ 616131 (-)
LOC110516737 LOC106564141 coding downstream 519888 514921 ~ 593946 (-)
LOC118940076 NA coding downstream 732584 375863 ~ 381250 (-)
LOC110513882 LOC106564154 coding downstream 738309 370936 ~ 375525 (-)
LOC110485356 LOC106593583 coding upstream 2939 1117642 ~ 1132552 (-)
LOC110485354 LOC106596877 coding upstream 20735 1135438 ~ 1142110 (-)
LOC110513292 NA coding upstream 192799 1307109 ~ 1322818 (-)
LOC118940178 NA coding upstream 244679 1359382 ~ 1360463 (-)
LOC110517612 LOC106596510 coding upstream 311038 1425715 ~ 1540374 (-)
G1413290 NA non-coding downstream 341 1112772 ~ 1113493 (-)
LOC110485357 LOC106593600 non-coding downstream 4839 1077148 ~ 1124059 (-)
G1413289 NA non-coding downstream 9332 1104134 ~ 1104502 (-)
G1413260 NA non-coding downstream 30360 1082726 ~ 1083474 (-)
G1413286 NA non-coding downstream 32707 1080540 ~ 1081127 (-)
G1413299 NA non-coding upstream 10391 1125094 ~ 1125334 (-)
G1413302 NA non-coding upstream 13155 1127858 ~ 1128137 (-)
G1413308 NA non-coding upstream 32399 1147102 ~ 1151913 (-)
G1413311 NA non-coding upstream 41003 1155706 ~ 1156046 (-)
G1412446 NA other downstream 846916 223204 ~ 267589 (-)
LOC110487339 ubl5 other downstream 860742 247497 ~ 253151 (-)
G1412456 NA other downstream 874706 236645 ~ 239128 (-)
G1412387 NA other downstream 1055696 57817 ~ 58138 (-)
G1413309 LOC106564120 other upstream 38874 1153577 ~ 1154594 (-)
G1413319 NA other upstream 493750 1608453 ~ 1609111 (-)

Expression


Co-expression Network