G1415093


Basic Information

Item Value
gene id G1415093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 2872442 ~ 2882757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1617862
GGCCGGTCAGGCAGGATGAAGACTCTGGGTCTGTGTGTGGAGCTgatggtggaggggggaggagagggggacaggcCAGAGGATGTACCCGCTGATAGGCTGCCCTGGCTGGGGTGAGGGGCGGACCAGGGTGGGGGTCTGGTGGTTCTGAGCCTGGGGAACGACTGTGTGGAAGAgattggttgtgttgtggttgtggatGGTTGTTTTGTGGTCAGTGGTGGTTGTGTTGTGATTGTggatggttgtgttgtggttgtggatGGTTGTTTCGTGGTCagtgatggttgtgttgtggttgtggtggtgacCACAGGACTGGTTGTGACGACAGGGTAGAGGGGAGTTGTGTTCGGACCGCGGGGAGAGGTCAGAGCTGTTGGGGTCGGGGTCAGAACAGAACGGTCAGGATGGGTGGTGGTGTGTTCCTGGATAGGGTTGAGTGGTGAGGGGGGGGGCACCGCGGTTGAGGAGAGTACAGGTGTctgtgagagaggtgtgtgtgtttggatggcgtgtgtagcgtgtgtgtgttcaggtgtgtgtgtagcgtgtgtgtgtgagagcagggGTGTGTCTGTGTCCGTCTCTGGCCATTGCGATTCACTGTCCGTCATTGTGGTGCTGGTCGTCGTGGTAACCAGTAGAGGTTGATCAGGGGTCAGAGGTGAGGCGATGGTCTGGACTACATCTCCCAGAGGCAGCTCTGCTGTGGTGAATggagaggagatgaagggatTTGTAGTCCCGTTgtagtctctgtctctgtcaggactgaagggtgaggaggaggaggagaggggtgagtcaGGGAGggtatggaggagaggagaggaagaggaggaggaggagaaggaggaggaggaggaggaggaagaggaggaggagaggggtgagtcaGGGAgggaagggatgagaggagaggaagaggaggaggaggagaggggtgagtccgggagggaagggaggagaggagaggaggaggaggaggaggaggaggaggaggaggaggagtaggaggagaggggtgagtcaGTGAGGGTGtttgggggagtgtgtgtggggtgtgttagGATGGGAGGAGTCAGAGTGATTTGTGATGTTAGAGTGTTTGAGGGAGATAGAGATCCACTAGTAATGTTTGTCTCTAAAGAGAATGATGAATCCGTTTCACTGTTGATTTCTGTCCTGGTTGTCTGTCTTTGATTACTTCTGTCTGGATCCGGAGAGGAGGATGTTGGTGTTCGACTAGTAATGTCTGATTCAGGTAGCCCCTCAGTCACAGGTCCGCTGGTCTGACTCAAGGTGACCTCAGAGGTGACCTTTAACCCCTCAGGGTCAGGGGTCATCCCAGGTCCCCTCTCACCCCGCCCTACTCTGACGCTCCTGGTGCTCCTCCCCCCAGGGGGCCGGCCCCGCTCCGTCAGCCCAGCCAGGGTGTATCGTTGTGGGGTTAGGGTCCGGCCAGGCTTTCCTGGGCCTGATAGAGGGctggaggtcagagagagagggagacgcagGGCtctggggagggagatggatgggTCTCTGTGAGAGGTGTGTTGGTCTGTGGGTGAATCtgtaggtgagtgtgtgtgttggtctgcgGGTGAgtctgtgggtgagtgtgtgggtgAGTCTGTGGGTGAgtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgctggcctgtgggtgagtgtgtgggtgaatgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgggtgaatgtgtgtgttggtctgtgggtgagtgtgtgggtgaatgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgtgtgtttatgttggtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtaggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgtgtgtttatgttggtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgtgtgtgtgtgtgtgtct
>TU1617851
GGCCGGTCAGGCAGGATGAAGACTCTGGGTCTGTGTGTGGAGCTgatggtggaggggggaggagagggggacaggcCAGAGGATGTACCCGCTGATAGGCTGCCCTGGCTGGGGTGAGGGGCGGACCAGGGTGGGGGTCTGGTGGTTCTGAGCCTGGGGAACGACTGTGTGGAAGAgattggttgtgttgtggttgtggatGGTTGTTTTGTGGTCAGTGGTGGTTGTGTTGTGATTGTggatggttgtgttgtggttgtggatGGTTGTTTCGTGGTCagtgatggttgtgttgtggttgtggtggtgacCACAGGACTGGTTGTGACGACAGGGTAGAGGGGAGTTGTGTTCGGACCGCGGGGAGAGGTCAGAGCTGTTGGGGTCGGGGTCAGAACAGAACGGTCAGGATGGGTGGTGGTGTGTTCCTGGATAGGGTTGAGTGGTGAGGGGGGGGGCACCGCGGTTGAGGAGAGTACAGGTGTctgtgagagaggtgtgtgtgtttggatggcgtgtgtagcgtgtgtgtgttcaggtgtgtgtgtagcgtgtgtgtgtgagagcagggGTGTGTCTGTGTCCGTCTCTGGCCATTGCGATTCACTGTCCGTCATTGTGGTGCTGGTCGTCGTGGTAACCAGTAGAGGTTGATCAGGGGTCAGAGGTGAGGCGATGGTCTGGACTACATCTCCCAGAGGCAGCTCTGCTGTGGTGAATggagaggagatgaagggatTTGTAGTCCCGTTgtagtctctgtctctgtcaggactgaagggtgaggaggaggaggagaggggtgagtcaGGGAGggtatggaggagaggagaggaagaggaggaggaggagaaggaggaggaggagaggggtgagtcaGTGAGGGTGtttgggggagtgtgtgtggggtgtgttagGATGGGAGGAGTCAGAGTGATTTGTGATGTTAGAGTGTTTGAGGGAGATAGAGATCCACTAGTAATGTTTGTCTCTAAAGAGAATGATGAATCCGTTTCACTGTTGATTTCTGTCCTGGTTGTCTGTCTTTGATTACTTCTGTCTGGATCCGGAGAGGAGGATGTTGGTGTTCGACTAGTAATGTCTGATTCAGGTAGCCCCTCAGTCACAGGTCCGCTGGTCTGACTCAAGGTGACCTCAGAGGTGACCTTTAACCCCTCAGGGTCAGGGGTCATCCCAGGTCCCCTCTCACCCCGCCCTACTCTGACGCTCCTGGTGCTCCTCCCCCCAGGGGGCCGGCCCCGCTCCGTCAGCCCAGCCAGGGTGTATCGTTGTGGGGTTAGGGTCCGGCCAGGCTTTCCTGGGCCTGATAGAGGGctggaggtcagagagagagggagacgcagGGCtctggggagggagatggatgggTCTCTGTGAGAGGTGTGTTGGTCTGTGGGTGAATCtgtaggtgagtgtgtgtgttggtctgcgGGTGAgtctgtgggtgagtgtgtgggtgAGTCTGTGGGTGAgtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgctggcctgtgggtgagtgtgtgggtgaatgtgtgtgttggtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtaggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgtgtgtttatgttggtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgagtgtgtatgttggtctgtgggtgagtgtgtgtgttggtctgtgggtgagtctgtgggtgagtgtgtatgttggtatgtgggtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgctggcctgtgggtgagtgtgtgtgttggtctgtggttgagtgtgtgtgttggtccgtgggtgagatgtgtgtgtccgtgtgtgtgttcattctgGCAGGGTCCATGggtaaggtgtgtgtgtcagtgtgtgtgtccgtgtgtgtgttcattccgGCAGGGTCGTACCCTGTAGTGACGTGGTCAACAGACTGAGGAGTTCCAGACATATCCCTTCTATTGTCTGGTTCTTCCTCAGGAAGCAGGGGGACTTCCCTATCGGCGTGCCCAGCCACGGTGAGCCCCGCCTGGGGAGAGGACCGGGTTGACGGCCCCTGTAGGGTGGGGGTAGAACCAGGGATCCAGTCCAACTCTAAATCTCCCACAAAGCTTTCAGATGGTTGAAGACTGCCCTCATCaaccctctctcccatctctcccatctctcccctctcacccctccctcccatctctcccctctctcccctctctcccctccctcccctctctcccctctctcccctctctcccctctctcccccatcacccCTCCGTCCCGTCAGAGTCAACATGTATTTGTTCCGGGCAGTTCCGTGGAAGCTTTCGGAGCGTTGGACTGAAGACACACCCATCCAAGGGCCTTGACGCTCCGAGGAATTCCAGTCGGCTTCCTGACCTGGAAAccgcaggaacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacaca
>TU1617853
GGCCGGTCAGGCAGGATGAAGACTCTGGGTCTGTGTGTGGAGCTgatggtggaggggggaggagagggggacaggcCAGAGGATGTACCCGCTGATAGGCTGCCCTGGCTGGGGTGAGGGGCGGACCAGGGTGGGGGTCTGGTGGTTCTGAGCCTGGGGAACGACTGTGTGGAAGAgattggttgtgttgtggttgtggatGGTTGTTTTGTGGTCAGTGGTGGTTGTGTTGTGATTGTggatggttgtgttgtggttgtggatGGTTGTTTCGTGGTCagtgatggttgtgttgtggttgtggtggtgacCACAGGACTGGTTGTGACGACAGGGTAGAGGGGAGTTGTGTTCGGACCGCGGGGAGAGGTCAGAGCTGTTGGGGTCGGGGTCAGAACAGAACGGTCAGGATGGGTGGTGGTGTGTTCCTGGATAGGGTTGAGTGGTGAGGGGGGGGGCACCGCGGTTGAGGAGAGTACAGGTGTctgtgagagaggtgtgtgtgtttggatggcgtgtgtagcgtgtgtgtgttcaggtgtgtgtgtagcgtgtgtgtgtgagagcagggGTGTGTCTGTGTCCGTCTCTGGCCATTGCGATTCACTGTCCGTCATTGTGGTGCTGGTCGTCGTGGTAACCAGTAGAGGTTGATCAGGGGTCAGAGGTGAGGCGATGGTCTGGACTACATCTCCCAGAGGCAGCTCTGCTGTGGTGAATggagaggagatgaagggatTTGTAGTCCCGTTgtagtctctgtctctgtcaggactgaagggtgaggaggaggaggagaggggtgagtcaGGGAGggtatggaggagaggagaggaagaggaggaggaggagaaggaggaggaggaggaggaggagaaggaggaggaggaggaggaggaggaggaggaggaggagaggggtgagtccgggagagtagggaggagaggagaggaagaggaggaggaggagaggggtgagtcatggagggtagggaggagaggagatgaagaggaggaggaggaggagaggtgtgagtcatggagggtagggaggagaggagaggaagaggaggaggaggagaggggtgagtcatggagggtagggaggagaggagaggaggatgaagaggaggagaggggtgagtcaggggggagagaagaggaagaggaagaggaggatgagaggggtgagtcaggggggagaggagaggaagaggaggaggagaggggtgagtcaGGGAgggaagggatgagaggagaggaagaggaggaggaggagaggggtgagtccgggagggaagggaggagaggagaggaggaggaggaggaggaggaggaggaggaggaggagtaggaggagaggggtgagtcaGTGAGGGTGtttgggggagtgtgtgtggggtgtgttagGATGGGAGGAGTCAGAGTGATTTGTGATGTTAGAGTGTTTGAGGGAGATAGAGATCCACTAGTAATGTTTGTCTCTAAAGAGAATGATGAATCCGTTTCACTGTTGATTTCTGTCCTGGTTGTCTGTCTTTGATTACTTCTGTCTGGATCCGGAGAGGAGGATGTTGGTGTTCGACTAGTAATGTCTGATTCAGGTAGCCCCTCAGTCACAGGTCCGCTGGTCTGACTCAAGGTGACCTCAGAGGTGACCTTTAACCCCTCAGGGTCAGGGGTCATCCCAGGTCCCCTCTCACCCCGCCCTACTCTGACGCTCCTGGTGCTCCTCCCCCCAGGGGGCCGGCCCCGCTCCGTCAGCCCAGCCAGGGTGTATCGTTGTGGGGTTAGGGTCCGGCCAGGCTTTCCTGGGCCTGATAGAGGGctggaggtcagagagagagggagacgcagGGCtctggggagggagatggatgggTCTCTGTGAGAGGTGTGTTGGTCTGTGGGTGAATCtgtaggtgagtgtgtgtgttggtctgcgGGTGAgtctgtgggtgagtgtgtgggtgAGTCTGTGGgtgagtgtgtgtgttggtctgtgggtgagtgtgtgtgttggtccgtgggtgagatgtgtgtgtccgtgtgtgtgttcattctgGCAGGGTCCATGggtaaggtgtgtgtgtcagtgtgtgtgtccgtgtgtgtgttcattccgGCAGGGTCGTACCCTGTAGTGACGTGGTCAACAGACTGAGGAGTTCCAGACATATCCCTTCTATTGTCTGGTTCTTCCTCAGGAAGCAGGGGGACTTCCCTATCGGCGTGCCCAGCCACGGTGAGCCCCGCCTGGGGAGAGGACCGGGTTGACGGCCCCTGTAGGGTGGGGGTAGAACCAGGGATCCAGTCCAACTCTAAATCTCCCACAAAGCTTTCAGATGGTTGAAGACTGCCCTCATCaaccctctctcccatctctcccctctctcccctctctcccccatcacccCTCCGTCCCGTCAGAGTCAACATGTATTTGTTCCGGGCAGTTCCGTGGAAGCTTTCGGAGCGTTGGACTGAAGACACACCCATCCAAGGGCCTTGACGCTCCGAGGAATTCCAGTCGGCTTCCTGACCTGGAAAccgcaggaacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592021, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1617862 False 2265 lncRNA 0.56 4 2872442 2882757
TU1617851 False 2693 lncRNA 0.57 3 2879303 2882757
TU1617853 True 2624 lncRNA 0.58 5 2879303 2882757
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110511975 LOC106592651 coding downstream 21649 2849351 ~ 2850793 (-)
LOC118940191 LOC106593538 coding downstream 32320 2835197 ~ 2840122 (-)
LOC110513170 NA coding downstream 38650 2818436 ~ 2833792 (-)
LOC118936352 LOC106593206 coding downstream 62336 2801377 ~ 2810350 (-)
LOC110516478 LOC106564555 coding downstream 80434 2782336 ~ 2792008 (-)
LOC118940054 NA coding upstream 73871 2956628 ~ 2957627 (-)
LOC118940193 NA coding upstream 87004 2969761 ~ 2976637 (-)
LOC118936434 NA coding upstream 154867 3037624 ~ 3044905 (-)
LOC118940190 NA coding upstream 165040 3047797 ~ 3053959 (-)
LOC110519887 NA coding upstream 224456 3107213 ~ 3113094 (-)
G1415084 NA non-coding downstream 23465 2848498 ~ 2848977 (-)
G1415049 NA non-coding downstream 63944 2760004 ~ 2808498 (-)
G1415061 NA non-coding downstream 90397 2780459 ~ 2782045 (-)
LOC110511979 LOC106594716 non-coding downstream 115030 2741095 ~ 2773447 (-)
G1414975 NA non-coding downstream 218335 2648920 ~ 2654107 (-)
G1415098 NA non-coding upstream 3293 2886050 ~ 2888464 (-)
G1415101 NA non-coding upstream 19405 2902162 ~ 2905404 (-)
G1415113 NA non-coding upstream 44255 2927012 ~ 3214459 (-)
G1415011 NA non-coding upstream 49121 2931878 ~ 2932338 (-)
G1415123 NA non-coding upstream 67749 2950506 ~ 2950805 (-)
LOC110516499 LOC106563979 other downstream 153475 2713556 ~ 2723485 (-)
LOC118940184 LOC106591209 other downstream 239511 2555143 ~ 2642537 (-)
LOC110511869 LOC105029636 other downstream 457719 2404432 ~ 2494634 (-)
LOC110500804 NA other upstream 506518 3388852 ~ 3391857 (-)
G1415450 LOC106594479 other upstream 908366 3776397 ~ 3914299 (-)
LOC110487340 LOC106595892 other upstream 1039825 3890766 ~ 3955806 (-)
LOC118940062 LOC106594488 other upstream 1078289 3961026 ~ 3967368 (-)

Expression

G1415093 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G1415093 Expression in each Bioproject

Bar chart with 17 bars.
G1415093 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network