G1414434


Basic Information

Item Value
gene id G1414434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 3590393 ~ 3600933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1616909
CCCCAAAACATAATGAACAATATTAGAGGGTTTATACTCGCAATGGATGAATGGTAGTATTTATCATCTCCAGATGAAAACTTGAAAAGAGTAGGTCTATTTTGTTAATGATTTCATGTTAACAATATGATTTCATTTGGCATAAACAAAAACCTAAATTCTCAGGTCAAAAACATAAGTCAGAACACagcctctctattctctcatgtgatttcaggtccTCTGCCTGGGAAAATGTCTTTCCACAATGAGAGCACTGGTAGggcttttcccctgtgtgtatcTTTTCATGCTTCTTCAGGCTACTTAAgcgggtaaaactctttccacactgggaacattggaacggcttttcccctgtgtgtgtcctctcatgctccTCCAGGCTCCTTAAGCGGGTAAAatgctttccacactgggaacattggaacggattttcccctgtgtgtatccTCTCATGCTCCTCCAGGCTCCTTAAGCGGGTAAAatgctttccacactgggaacattggaaaggctttccccctgtgtgtgtcctctcatgcgtCGTCAGGCACTTTAAGCGGGTAAaacgctttccacactgggaacattggaacggcttttcccctgtgtgtgtcctctcatgcctcTTCAGCCTGCTTAAGCAGGCAAAACGCTTCCCACAGTGGGAACATtggaaataatgtgtgtgtgtcctctcatgcgcCTTCAGGTTGCTTAAGCGGttaaaacactttccacactgggaacattggaaaggcttctcccctgtgtgtatcctCTCATGCCGTTTTAGGTCCCCTGATTTGGAAAACCTCTTttcacattgggagcagtggtgttGTCTCGCTGGTTTGGGCGTCTCTGGGTCTGGTCCCCCCGAAGGACTCTTTCCGCTGTCAGAGTgagagtctggtctctctc

Function

NR:

description
gastrula zinc finger protein XlCGF7.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1616909 True 927 lncRNA 0.46 2 3590393 3600933

Neighbor

gene id symbol gene type direction distance location
LOC110487186 LOC106595670 coding upstream 7680 3573552 ~ 3582713 (+)
LOC118940207 LOC106595687 coding upstream 21037 3563394 ~ 3569356 (+)
LOC110506843 LOC106595654 coding upstream 33068 3551904 ~ 3557325 (+)
LOC110506159 LOC106595729 coding upstream 53547 3530474 ~ 3536846 (+)
LOC110506850 LOC106593733 coding upstream 64276 3519620 ~ 3526117 (+)
LOC118940061 NA coding downstream 7152 3608085 ~ 3609985 (+)
trnai-uau-4 NA coding downstream 14136 3615069 ~ 3615162 (+)
LOC118940205 LOC106585892 coding downstream 69287 3670220 ~ 3678312 (+)
LOC110487326 LOC106607542 coding downstream 82644 3683577 ~ 3711129 (+)
LOC110513872 LOC106593751 coding downstream 120521 3721454 ~ 3728602 (+)
G1414425 NA non-coding upstream 17823 3572032 ~ 3572570 (+)
G1414402 NA non-coding upstream 73338 3516531 ~ 3517055 (+)
G1414399 NA non-coding upstream 83089 3506998 ~ 3507304 (+)
G1414394 LOC106608449 non-coding upstream 87358 3501498 ~ 3503035 (+)
G1414440 NA non-coding downstream 4187 3605120 ~ 3606830 (+)
G1414459 NA non-coding downstream 44792 3645725 ~ 3646419 (+)
G1414461 NA non-coding downstream 47544 3648477 ~ 3649954 (+)
G1414475 NA non-coding downstream 84367 3685300 ~ 3693680 (+)
LOC118940210 NA non-coding downstream 177565 3778498 ~ 3794005 (+)
LOC118940198 LOC106593831 other upstream 232699 3355122 ~ 3359173 (+)
LOC110513329 LOC106595349 other upstream 302435 3279105 ~ 3288531 (+)
LOC118940192 NA other upstream 598754 2988823 ~ 2992650 (+)
G1414065 NA other upstream 900252 2662170 ~ 2690141 (+)
G1414190 NA other downstream 289830 3890763 ~ 3893220 (+)
LOC118940211 NA other downstream 514729 4115570 ~ 4119613 (+)
LOC118940222 NA other downstream 885693 4486626 ~ 4489118 (+)
LOC110533195 LOC106591134 other downstream 891233 4489324 ~ 4500670 (+)

Expression


Co-expression Network