Gene
RNA
| Item | Value |
|---|---|
| gene id | G1414519 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 3797348 ~ 3800636 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1617040 | False | 352 | lncRNA | 0.43 | 2 | 3797348 | 3799006 |
| TU1617041 | True | 248 | lncRNA | 0.54 | 2 | 3798889 | 3800636 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940210 | NA | coding | upstream | 3343 | 3778498 ~ 3794005 (+) |
| LOC110487321 | LOC106593224 | coding | upstream | 19420 | 3770658 ~ 3777928 (+) |
| LOC110487330 | LOC106591998 | coding | upstream | 28405 | 3755811 ~ 3768943 (+) |
| LOC118940209 | LOC106607538 | coding | upstream | 46416 | 3733169 ~ 3750932 (+) |
| LOC110513872 | LOC106593751 | coding | upstream | 68746 | 3721454 ~ 3728602 (+) |
| LOC118936460 | LOC106592292 | coding | downstream | 6495 | 3807131 ~ 3814967 (+) |
| LOC110516207 | LOC106592850 | coding | downstream | 25321 | 3825957 ~ 3829616 (+) |
| LOC110487310 | LOC106594479 | coding | downstream | 37148 | 3837784 ~ 3888090 (+) |
| LOC110487309 | LOC106594479 | coding | downstream | 92824 | 3893460 ~ 3914294 (+) |
| LOC118940214 | NA | coding | downstream | 158228 | 3958864 ~ 3959209 (+) |
| G1414475 | NA | non-coding | upstream | 103668 | 3685300 ~ 3693680 (+) |
| G1414461 | NA | non-coding | upstream | 147394 | 3648477 ~ 3649954 (+) |
| G1414459 | NA | non-coding | upstream | 150929 | 3645725 ~ 3646419 (+) |
| G1414440 | NA | non-coding | upstream | 190518 | 3605120 ~ 3606830 (+) |
| G1414212 | NA | non-coding | downstream | 5449 | 3806085 ~ 3851350 (+) |
| G1414547 | NA | non-coding | downstream | 42460 | 3843096 ~ 3844552 (+) |
| G1414167 | NA | non-coding | downstream | 87839 | 3888475 ~ 3889703 (+) |
| G1414207 | NA | non-coding | downstream | 88463 | 3889099 ~ 3890121 (+) |
| LOC118940205 | LOC106585892 | other | upstream | 121327 | 3670220 ~ 3678312 (+) |
| G1414430 | NA | other | upstream | 204433 | 3587244 ~ 3592915 (+) |
| LOC110506850 | LOC106593733 | other | upstream | 271362 | 3519620 ~ 3526117 (+) |
| LOC118940198 | LOC106593831 | other | upstream | 439654 | 3355122 ~ 3359173 (+) |
| LOC110513329 | LOC106595349 | other | upstream | 509390 | 3279105 ~ 3288531 (+) |
| G1414190 | NA | other | downstream | 90127 | 3890763 ~ 3893220 (+) |
| LOC118940211 | NA | other | downstream | 315026 | 4115570 ~ 4119613 (+) |
| LOC118940222 | NA | other | downstream | 685990 | 4486626 ~ 4489118 (+) |
| LOC110533195 | LOC106591134 | other | downstream | 691530 | 4489324 ~ 4500670 (+) |
| radil | LOC106592570 | other | downstream | 831050 | 4631686 ~ 4726137 (+) |
