G1414212


Basic Information

Item Value
gene id G1414212
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 3806085 ~ 3851350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1616622
cttacataacctagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgactagcataacgtagtagtacaaagcctgacttaaataacgtagtagtacaaagcctgacttaaataacgtagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgactagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgacttgtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttatataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgactagtagtacaaagcctgacttaaataacgtagtagtacaaagcctgacttaaataacgtagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgacttacataacgtagtcgtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgactagtagtacaaagcctgacttaaataacgtagtagtacaaagcctgactagtagtacaaagcctgacttacataacgtagtagtacaaagcctgacttacataacgtagtagta

Function

NR:

description
uncharacterized protein LOC110512607 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1616622 True 951 lncRNA 0.39 2 3806085 3851350

Neighbor

gene id symbol gene type direction distance location
LOC110487318 LOC106594474 coding upstream 2506 3795458 ~ 3803579 (+)
LOC118940210 NA coding upstream 12080 3778498 ~ 3794005 (+)
LOC110487321 LOC106593224 coding upstream 28157 3770658 ~ 3777928 (+)
LOC110487330 LOC106591998 coding upstream 37142 3755811 ~ 3768943 (+)
LOC118940209 LOC106607538 coding upstream 55153 3733169 ~ 3750932 (+)
LOC110487309 LOC106594479 coding downstream 42110 3893460 ~ 3914294 (+)
LOC118940214 NA coding downstream 107514 3958864 ~ 3959209 (+)
LOC118940213 NA coding downstream 108633 3959983 ~ 3960348 (+)
LOC118940212 NA coding downstream 142690 3994040 ~ 3997114 (+)
LOC118940211 NA coding downstream 264220 4115570 ~ 4119613 (+)
G1414519 NA non-coding upstream 5449 3797348 ~ 3800636 (+)
G1414520 NA non-coding upstream 5966 3799075 ~ 3800119 (+)
G1414475 NA non-coding upstream 112405 3685300 ~ 3693680 (+)
G1414461 NA non-coding upstream 156131 3648477 ~ 3649954 (+)
G1414167 NA non-coding downstream 37125 3888475 ~ 3889703 (+)
G1414207 NA non-coding downstream 37749 3889099 ~ 3890121 (+)
G1414562 LOC106593750 non-coding downstream 69924 3921274 ~ 3921664 (+)
G1414569 LOC106593708 non-coding downstream 80639 3931989 ~ 3932279 (+)
LOC118940205 LOC106585892 other upstream 130064 3670220 ~ 3678312 (+)
G1414430 NA other upstream 213170 3587244 ~ 3592915 (+)
LOC110506850 LOC106593733 other upstream 280099 3519620 ~ 3526117 (+)
LOC118940198 LOC106593831 other upstream 448391 3355122 ~ 3359173 (+)
LOC110513329 LOC106595349 other upstream 518127 3279105 ~ 3288531 (+)
G1414190 NA other downstream 39413 3890763 ~ 3893220 (+)
LOC118940222 NA other downstream 635276 4486626 ~ 4489118 (+)
LOC110533195 LOC106591134 other downstream 640816 4489324 ~ 4500670 (+)
radil LOC106592570 other downstream 780336 4631686 ~ 4726137 (+)

Expression


Co-expression Network