G1416180 (LOC106594343)


Basic Information

Item Value
gene id G1416180
gene name LOC106594343
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 6216219 ~ 6217253 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1619415
tctttcaaccacctcgatagcttgctagccaacataaaACTGGAAGATTGTCGCTTTAGACCATGTTAATGTACATTATGTAATCTCAGTGTTGTAAACGCAGTTCACTTGACGTAATAACTGGTTAACTTGAACCTAATTTGCATGTTCAATTTGCAAACTTGTTAAAGATTGTTGctgagcctagcactaggctagtcgctaatgctagctagctagctaatgtcacTGACCATGAGCTCATTAAACTACTCATCCCCTGTTAAAGAAGAGGTCTGCTGTttggagaaagaagctctggcgatgaacattgtcgtgaaagaagaagaagaagaggaggatattactctgaaaggagaggaagaatctttcagaatgaaaaaggaggaagatgaggctgttatagtgaaagaagagagagaaccttttagagaggaagaggatgctatctcaataaaggtgaaggaggaagacgttttgggagtgaaagaggaggagacagaatatcagattaacaccagagagagacatgactatggtggatcctctggggagcctgaacaacatcctgatgctgacgaggcagagaagagtctctccagatcagaacaccagatgg

Function

NR:

description
PREDICTED: protein Ycf2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1619415 True 619 TUCP 0.42 2 6216219 6217253

Neighbor

gene id symbol gene type direction distance location
LOC118940646 NA coding upstream 59732 6156382 ~ 6156487 (+)
LOC118940642 NA coding upstream 60695 6155417 ~ 6155524 (+)
LOC118940626 NA coding upstream 61652 6154461 ~ 6154567 (+)
LOC118940636 NA coding upstream 62611 6153502 ~ 6153608 (+)
LOC118940625 NA coding upstream 63571 6152542 ~ 6152648 (+)
LOC110515695 LOC106608468 coding downstream 12816 6230069 ~ 6235946 (+)
LOC118940017 LOC106608468 coding downstream 29098 6246351 ~ 6250968 (+)
LOC118940021 NA coding downstream 39343 6256596 ~ 6262067 (+)
LOC110518718 NA coding downstream 52672 6269925 ~ 6278740 (+)
LOC118940064 LOC106608470 coding downstream 79101 6292497 ~ 6298972 (+)
G1416146 NA non-coding upstream 3775 6207436 ~ 6212444 (+)
G1416307 NA non-coding upstream 27229 6188003 ~ 6188990 (+)
G1416299 NA non-coding upstream 114221 6093674 ~ 6101998 (+)
G1416153 NA non-coding upstream 131078 6084867 ~ 6085141 (+)
G1416290 NA non-coding upstream 147112 6068763 ~ 6069107 (+)
G1416327 NA non-coding downstream 45465 6262718 ~ 6279470 (+)
G1416338 NA non-coding downstream 84510 6301763 ~ 6302047 (+)
G1416342 NA non-coding downstream 111175 6328428 ~ 6329690 (+)
G1416346 NA non-coding downstream 120586 6337839 ~ 6338529 (+)
G1416304 NA other upstream 46672 6168395 ~ 6169547 (+)
LOC110493338 LOC106590982 other upstream 150762 6056654 ~ 6066070 (+)
G1415943 NA other upstream 1046646 5168936 ~ 5169573 (+)
LOC110514795 LOC106591899 other upstream 1258814 4945436 ~ 4974798 (+)
G1414826 NA other upstream 1362894 4799523 ~ 4853325 (+)
LOC118940005 LOC106593103 other downstream 306251 6523504 ~ 6578882 (+)
G1416413 NA other downstream 400930 6618183 ~ 6650197 (+)
G1416452 NA other downstream 502534 6719787 ~ 6720394 (+)
G1416462 NA other downstream 535549 6752802 ~ 6769590 (+)
G1416559 NA other downstream 1110802 7328055 ~ 7334299 (+)

Expression


Co-expression Network