G1416405


Basic Information

Item Value
gene id G1416405
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 6605003 ~ 6613302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1619682
tctctgacatctaattccgtctctgacatctaattccatctctgacatctaattctgtatctgacatctaattccatctctgacatctaattccatctctgacatctaattccatctctgacatctaattccatctctgacatctaattccatctctgacatctaattaatatatctctgacatctaattaatatatctctgacatctaattaatatatctctgacatctaattctgtatctgacatctaattccatctctgacatctaattctgtatctgacatctaattctgtatctgacatctaattccatctctgacatctaattaatatatctctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1619682 True 343 lncRNA 0.33 2 6605003 6613302

Neighbor

gene id symbol gene type direction distance location
LOC110511216 LOC106564015 coding upstream 9767 6586931 ~ 6595236 (+)
LOC118940005 LOC106593103 coding upstream 26121 6523504 ~ 6578882 (+)
LOC118940019 NA coding upstream 89440 6514024 ~ 6515563 (+)
LOC118940067 NA coding upstream 136440 6449002 ~ 6468563 (+)
LOC118940066 NA coding upstream 165234 6430118 ~ 6439769 (+)
LOC110514652 NA coding downstream 7869 6621171 ~ 6632046 (+)
LOC110514651 LOC106595305 coding downstream 22804 6636106 ~ 6660778 (+)
LOC118940231 NA coding downstream 33305 6646607 ~ 6648168 (+)
LOC118940233 NA coding downstream 41166 6654467 ~ 6656974 (+)
LOC118940246 NA coding downstream 752634 7365617 ~ 7381649 (+)
G1416394 NA non-coding upstream 37620 6566940 ~ 6567383 (+)
G1416346 NA non-coding upstream 266474 6337839 ~ 6338529 (+)
G1416342 NA non-coding upstream 275313 6328428 ~ 6329690 (+)
G1416338 NA non-coding upstream 302956 6301763 ~ 6302047 (+)
LOC118940064 LOC106608470 non-coding upstream 308487 6292497 ~ 6298972 (+)
G1416429 NA non-coding downstream 64480 6677782 ~ 6683556 (+)
G1416439 NA non-coding downstream 91820 6705122 ~ 6706588 (+)
G1416451 NA non-coding downstream 106269 6719571 ~ 6720681 (+)
G1416453 NA non-coding downstream 111613 6724915 ~ 6754655 (+)
G1416180 LOC106594343 other upstream 387750 6216219 ~ 6217253 (+)
G1416304 NA other upstream 435456 6168395 ~ 6169547 (+)
LOC110493338 LOC106590982 other upstream 539546 6056654 ~ 6066070 (+)
G1415943 NA other upstream 1435430 5168936 ~ 5169573 (+)
G1416413 NA other downstream 4881 6618183 ~ 6650197 (+)
G1416452 NA other downstream 106485 6719787 ~ 6720394 (+)
G1416462 NA other downstream 139500 6752802 ~ 6769590 (+)
G1416559 NA other downstream 714753 7328055 ~ 7334299 (+)
G1417359 LOC106594003 other downstream 989453 7602755 ~ 7606668 (+)

Expression


Co-expression Network