G1417032


Basic Information

Item Value
gene id G1417032
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 6735028 ~ 6766126 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1620530
CCtgctaaagaagaggaggtctgctgttTGGAGAAAGAAGTTCTGGCGCTGAACAttgaagaagaggatgaggttacagtgaaagaagagaaataagcttttagaatgaaaaaggaggaagatgaggctgttacagtgaaagaagagaaagaaccttttagaatgaaaaaggaggaagaggagactgttatagtgaaggaagaagatgctgttatagtgaaagaacatttcagaatgaaaaaggaggaagaggaggctgttatagtgataGAAGAGAATGAAccttttagagaggaagaggatgctgtctcaataaaggtgaaggaggaagacgttttgggagtgaaagaggaggagacagaatatcCGATTACcatcagtgagtactgtcttaaaaacaggggcacaaactatgc
>TU1620529
CCtgctaaagaagaggaggtctgctgttTGGAGAAAGAAGTTCTGGCGCTGAACAttgaagaagaggatgaggttacagtgaaagaagagaaataagcttttagaatgaaaaaggaggaagatgaggctgttatagtgaaggaagaagatgctgttatagtggaagaacatttcagaatgaaaaaggaggaagaggagactgttatagtgaaagaagagaaagaaccgtttagagaggaagaggatgctatctcaataaaggtgaaggaggaatacgtttttggagtgaaagaggagacagaatatcagattaacaccagtgagtactgtcttaaacagggacacaaactatgccgttgttgaactaatgtgtggttttaaagtggcattctactgaagttctacacttgaatatgttgttcagtactgtaggaattgttaaagggtcaatctgccattggttcatatattttagggacttttcaattagatgtattgaattctccatgttgtctatattaaagttcccctcatctagtataacaggcttttaaaattcaatattgaag

Function

NR:

description
protein MNN4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1620530 False 416 TUCP 0.40 2 6735028 6766126
TU1620529 True 569 TUCP 0.37 2 6765411 6766126
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118940069 LOC106594360 coding downstream 5331 6707000 ~ 6729697 (-)
LOC118940235 LOC106593103 coding downstream 31521 6687829 ~ 6703507 (-)
LOC118940230 NA coding downstream 81110 6652357 ~ 6653918 (-)
LOC118940232 NA coding downstream 88971 6643549 ~ 6646057 (-)
LOC118940068 LOC106588149 coding downstream 99076 6633811 ~ 6635952 (-)
LOC110519350 NA coding upstream 5785 6771911 ~ 6778334 (-)
LOC118940239 LOC106608471 coding upstream 30721 6796847 ~ 6798170 (-)
LOC118940238 LOC106608452 coding upstream 37582 6803708 ~ 6810838 (-)
LOC118940234 NA coding upstream 56492 6822618 ~ 6844420 (-)
LOC118940071 LOC106593103 coding upstream 86455 6852581 ~ 6965513 (-)
G1417143 NA non-coding downstream 51447 6683088 ~ 6683581 (-)
G1417123 LOC106595205 non-coding downstream 104368 6629221 ~ 6630660 (-)
G1417117 NA non-coding downstream 114917 6617987 ~ 6620111 (-)
G1417111 NA non-coding downstream 128073 6606161 ~ 6606955 (-)
G1417085 NA non-coding downstream 197224 6537121 ~ 6537804 (-)
G1417178 NA non-coding upstream 34245 6800371 ~ 7050572 (-)
G1417185 NA non-coding upstream 60726 6826852 ~ 6839417 (-)
LOC118940242 NA non-coding upstream 251778 7017904 ~ 7083762 (-)
G1417224 NA non-coding upstream 269285 7035411 ~ 7036059 (-)
G1417242 NA non-coding upstream 465280 7231406 ~ 7265598 (-)
LOC110516679 LOC106591074 other downstream 548439 6177918 ~ 6186909 (-)
G1416942 LOC106591698 other downstream 642998 6091441 ~ 6092030 (-)
G1416889 NA other downstream 734441 5999311 ~ 6000587 (-)
G1416869 NA other downstream 830501 5903158 ~ 5904527 (-)
G1416765 NA other downstream 1273783 5460597 ~ 5461245 (-)
G1417206 NA other upstream 151182 6917308 ~ 6918256 (-)
LOC118940245 LOC106564023 other upstream 444063 7209499 ~ 7245761 (-)
LOC110515395 LOC106595531 other upstream 754017 7519528 ~ 7537366 (-)
G1417422 LOC106596877 other upstream 774565 7540691 ~ 7543176 (-)

Expression

G1417032 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G1417032 Expression in each Bioproject

Bar chart with 20 bars.
G1417032 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network