G1416578


Basic Information

Item Value
gene id G1416578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 7325144 ~ 7325984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1619922
GGCTTTAGTGGGAGTTTCTTCCATATTTCTTATACCAGTCATTTTCTTTCAAATCGGTGAAGGGGtcgtgaacaagtgcacacttctggGAGGAAAGAGAGATAATTGGGACGGAGCCTGTTTGTTTGGTAGGCGACACACTCTGACACTAGTTTAGTCCTTCACTGCAGAAGGGTCGAAGGGGACACACCTTAATTAACTCAAACACCACCTTTCTGTAATTgccattcatgtgtgtgtgacaCTATGAGACGAGCTGTGAACCAATTATCGCTCTTTCCTTCCAAAAGGTGCACTTGTTAACTTCCCTTCACTGATTTGAAAGAAAATGACAGGTATAAATGACTGGTATAAATGACTGGTATAAATGACTGGTATAAATGACTGGTATAAATGACTGGTATAAATGACTGGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1619922 True 418 lncRNA 0.41 2 7325144 7325984

Neighbor

gene id symbol gene type direction distance location
LOC110514651 LOC106595305 coding upstream 664366 6636106 ~ 6660778 (+)
LOC118940233 NA coding upstream 668170 6654467 ~ 6656974 (+)
LOC118940231 NA coding upstream 676976 6646607 ~ 6648168 (+)
LOC110514652 NA coding upstream 693098 6621171 ~ 6632046 (+)
LOC110511216 LOC106564015 coding upstream 729908 6586931 ~ 6595236 (+)
LOC118940246 NA coding downstream 39952 7365617 ~ 7381649 (+)
LOC110485353 LOC106596877 coding downstream 211307 7537291 ~ 7543177 (+)
LOC110485355 LOC106593569 coding downstream 220363 7546347 ~ 7561297 (+)
LOC110487504 LOC106593600 coding downstream 240166 7566150 ~ 7599621 (+)
LOC110513544 LOC106564138 coding downstream 357718 7683702 ~ 7856746 (+)
G1416575 NA non-coding upstream 2693 7321883 ~ 7322451 (+)
G1416536 LOC106564044 non-coding upstream 65728 7062701 ~ 7259416 (+)
G1416554 NA non-coding upstream 77241 7247628 ~ 7247903 (+)
G1416544 NA non-coding upstream 126148 7198750 ~ 7198996 (+)
G1416520 NA non-coding upstream 288937 7000373 ~ 7036207 (+)
G1416580 NA non-coding downstream 37447 7363431 ~ 7363795 (+)
G1416593 NA non-coding downstream 37988 7363972 ~ 7364266 (+)
G1416605 NA non-coding downstream 86368 7412352 ~ 7413109 (+)
G1417284 NA non-coding downstream 96913 7422897 ~ 7423205 (+)
G1416462 NA other upstream 555554 6752802 ~ 6769590 (+)
G1416452 NA other upstream 604750 6719787 ~ 6720394 (+)
G1416413 NA other upstream 674947 6618183 ~ 6650197 (+)
LOC118940005 LOC106593103 other upstream 800289 6523504 ~ 6578882 (+)
G1416180 LOC106594343 other upstream 1107891 6216219 ~ 6217253 (+)
G1416559 NA other downstream 2071 7328055 ~ 7334299 (+)
G1417359 LOC106594003 other downstream 276771 7602755 ~ 7606668 (+)
G1417508 NA other downstream 371943 7697927 ~ 7698422 (+)
G1417561 NA other downstream 509118 7835102 ~ 7835589 (+)

Expression


Co-expression Network