G1416559


Basic Information

Item Value
gene id G1416559
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 7328055 ~ 7334299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1619900
TCCATCATTATTGAATTTATTGAAGAAATAAGGAGATATCAGGAATAACCAGCAGACACAGGACAGTATATTCAGGGAGACACATGGGAACCCAGGAGCAGTTACATGCTGTTATATCAGGAATAACCAGCAGAGACACAGGACAGTATATTCAGGGAGACACATGGGAACCCAGGAGCAGTTACATGCTGTTATATCAGGAATAACCAGCAGACACAGGACAGTATATTCAGGGAGACACATGGGAACACAGGAGCAGTTACATGCTTTTATATCAGGTATAAACAGCAGAGACAGGACAGTATATTCAGGGAGACACATGGGAACACAGGAGCAGTTACATGCTTTTAGTGGTTTTGGTCCGACTGTAGTCGGCCTTCCACAGTTGATTACAGCTCCTTCAATATCAGTGTGTTGAATTAGAAAGACAACCCTCCATTCTGATAAAACCACAAATTATACAGAGGGAAAAACCCCCGGACGTTTAACAATTCTCCCGATTCATAAAACGTCTCAATTCTGACACAACCAGCTAAAAAGAAAACAGTTAATTGTAATTTATTAAAAGTGCCGTTAGCTAAAACAAATTGCCCCCTAATCAATGACGACACAGGTATTGACCATTTTGAATAGCACATTCACGCTCAGATCCAATATGGATCAAATCATTCACGCATTCATTTCCTGGTCAAATCATTCATTTCCTGGTCAAATCATCCATTTCCTGGTTTCTCCACAAGACAAAAACTGGCCACATTTCTGTTGTCCACTATTGATCATTATACCAGAATGTGATGTCACTAAGGCACCACTGATCACTATAACAgaatgtgatgtcattaaggcACCACTGATCATTATGACAGAATGTGATGTCACTAAGGCACCACTGATCATTATGACAGAATGTGATGTCACTAAGGCACCACTGATCACTATAACAGAATGTGATGTCACTAAGGCACCACTGATCATTATAACAGAATGTTAAATGGTAAAAGCGAGTCTCTTATGAGGAATAAAAACCCCTTTGGCTGAAGGGCCAGCATTTATACACATTAACTTTGATCAATGCAAAATGCTGCTTAATAAAAGCTCATAAGACACTCATCACTGATCTGGGGTCAGGACATAACATTATAAAACGAACTAAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGGACATAACATTATAAAACGAACTAAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGGACATAACATTATAAAACGAACTAAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGGACATAACATTATAAAACGAACTAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGGACATAACATTATAAAACAAACTAAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGGACATAACATTATAAAACAAACTAAGGGGGGCGATTACAGAGCTAACATCTGATCTGGGGTCAGAAGATAAACCATCCCATGGGACAGATGAAGCCACAGAGAAACGTGATGATAGGTATGTCATGAGAAGAGTTGTCCGACCCCTCAACAAAACAACTTCTCTCTGTAGCTTGTAAACATGGGTGACTTAAAAACAGCAGAGGGCAAAGGGCAAAGGacacacggttGAGTGATGTCATTACATTacttacagacagacacacggttGAGTGATGCCAGCCATTAGCAGTGAGTCATTATTAGGCAGTGAGGCCGTAGTTCCTTTGATATCTTCTAATCCCTACATAATCCCCATCATACAGATTAACTAACcacacacattacatacagaCACCGTGTGGTGTAGTGTTATACTGAGTTTCAGGGCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGGCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGGCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGTCTCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGGCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagACACCGTGTGGTGTAGTGTTATACTGGGTTTCAGGTCTCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGTCTCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagacaccgggtGGTGTAGTGTTATACTGGGTTTCAGGTCTCTGGTTCATGTCAGGAGGGTATTatagacacattacatacagACACCGTGTGGTGTAGTGTTATACTGGGTTTCAGGGCTGGTTCATGTCAGGAGGGTATTATAGACATGAACCAGAGACCTAACAGACTTCAATACATCAACTATCAAAACAGTGACAACCACATCTCAAGCAGGGTAACAGTGTGTCCCAGAGTTCCTCCCCGTGGGATCATCCCTCCTTCTTGTTCCTACCAAACAACTTGAAGCTGGACTTCTTCTTCTTTTCTTTCTTTGtgtctgaaagagagagaggatgggatgagggagagagagaggatgggatgagagagagagaggatgggatgagggagagagaggatgggatgagggagagagagaggatgggatgagagagaggatgggatgagagagaggatgggatgagagagaggatgggatgagagagagagagaggatgggatgagagagagagagaagatgggatgagagagagagaggatgggatgagagagagaggatgggatgagagagagaggatgggatgagagagaaaggatgggatgagagagagagaggagtggtagagagtagaagtagagcgagagagagtagaggtaggTTCTCCATAGATAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTTTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGATTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTATCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGGTTAGAGAGGTTATCCATAGATACAGAGGGTTAGAGAGGTTCTCCATAGATACAGAGGTTTAGAGAGGACATTATTAGAGGGATGATTCACACAGTTGAGGAGCGATAGCACTTCCTGGTTTGGCCTCCTTTTAGAGTCagttcattaagaaatgctagcagCCATGACTGAATTCAAACCAGAGTTGGTTTCGGGGTGTGGTTtgatatgggtgtgtgtgtgtgtgtgtgttcacaggtgGGAAGGGTTAGCCAAATTATTTAGCCAATTAGCTCAGTTTTCTCCCTTTCTGGTTCTGATAAGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGTACTGACCTTGGGTTTGATAAGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTACAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTTGATAAGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTTGATAAGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTACAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTACAGAagggaaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTATAGAagataaactgatcctagatgtgTTGTGTAGGGACTGACCTTGGGTTTGATAAGGGTTATAGAAGATAAAATGATCCTAGATGTGTTGTGTAGGGACTGACCTAGGGTCTTCATCATCTTATTGAGCTGctcatcttcctcatcctccctgAAGAGAGATCAGACAGAAGATTAACGACACAGCATGactaacctacacacacacacacaatcccagaGAGCCATCCACATTAAAGACAGCTCCCCCCCTTTCTCTTACCTGAATctgtcatcccccctctctctcctacctgagtgtcatccccctctctctcctacccgagTCTgtcatccccccttctctcct

Function

NR:

description
PREDICTED: MICAL-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1619900 True 4649 TUCP 0.44 6 7328055 7334299

Neighbor

gene id symbol gene type direction distance location
LOC110514651 LOC106595305 coding upstream 667277 6636106 ~ 6660778 (+)
LOC118940233 NA coding upstream 671081 6654467 ~ 6656974 (+)
LOC118940231 NA coding upstream 679887 6646607 ~ 6648168 (+)
LOC110514652 NA coding upstream 696009 6621171 ~ 6632046 (+)
LOC110511216 LOC106564015 coding upstream 732819 6586931 ~ 6595236 (+)
LOC118940246 NA coding downstream 31637 7365617 ~ 7381649 (+)
LOC110485353 LOC106596877 coding downstream 202992 7537291 ~ 7543177 (+)
LOC110485355 LOC106593569 coding downstream 212048 7546347 ~ 7561297 (+)
LOC110487504 LOC106593600 coding downstream 231851 7566150 ~ 7599621 (+)
LOC110513544 LOC106564138 coding downstream 349403 7683702 ~ 7856746 (+)
G1416578 NA non-coding upstream 2071 7325144 ~ 7325984 (+)
G1416575 NA non-coding upstream 5604 7321883 ~ 7322451 (+)
G1416536 LOC106564044 non-coding upstream 68639 7062701 ~ 7259416 (+)
G1416554 NA non-coding upstream 80152 7247628 ~ 7247903 (+)
G1416544 NA non-coding upstream 129059 7198750 ~ 7198996 (+)
G1416580 NA non-coding downstream 29132 7363431 ~ 7363795 (+)
G1416593 NA non-coding downstream 29673 7363972 ~ 7364266 (+)
G1416605 NA non-coding downstream 78053 7412352 ~ 7413109 (+)
G1417284 NA non-coding downstream 88598 7422897 ~ 7423205 (+)
G1416462 NA other upstream 558465 6752802 ~ 6769590 (+)
G1416452 NA other upstream 607661 6719787 ~ 6720394 (+)
G1416413 NA other upstream 677858 6618183 ~ 6650197 (+)
LOC118940005 LOC106593103 other upstream 803200 6523504 ~ 6578882 (+)
G1416180 LOC106594343 other upstream 1110802 6216219 ~ 6217253 (+)
G1417359 LOC106594003 other downstream 268456 7602755 ~ 7606668 (+)
G1417508 NA other downstream 363628 7697927 ~ 7698422 (+)
G1417561 NA other downstream 500803 7835102 ~ 7835589 (+)
LOC118940250 LOC106564141 other downstream 736765 8070985 ~ 8141262 (+)

Expression


Co-expression Network