G1416580


Basic Information

Item Value
gene id G1416580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 7363431 ~ 7363795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1619924
TCGGGTCTGTTTCGGTGAATGAGGGCGCAGAAAGCCATCCCGTCCCTGAAAGAGGTGGTCATATTGGTGATAGTGACATCTCTGTAACCCTGAACCTGGATCTTACACCACTGTTGCAGCGCTTTCACCGCCGACATCCTAGTTCTCTCCCGAAACCCCGAACCGAGTGTAAAAGCGGCAAGACGCGATCCAAGTTCACGAACTGACCGCAACTAGTTGAGTTGCCACAACTTGAATAAATAGACGAGTGACTGAatctAACTTCTGACGAATGATTAAGGGAAACCTCattaaaaaagagagagagacaaagtcgTCCGCGTGGTCCTG

Function

NR:

description
MICAL-like protein 2, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1619924 True 330 lncRNA 0.49 2 7363431 7363795

Neighbor

gene id symbol gene type direction distance location
LOC110514651 LOC106595305 coding upstream 702653 6636106 ~ 6660778 (+)
LOC118940233 NA coding upstream 706457 6654467 ~ 6656974 (+)
LOC118940231 NA coding upstream 715263 6646607 ~ 6648168 (+)
LOC110514652 NA coding upstream 731385 6621171 ~ 6632046 (+)
LOC110511216 LOC106564015 coding upstream 768195 6586931 ~ 6595236 (+)
LOC118940246 NA coding downstream 2141 7365617 ~ 7381649 (+)
LOC110485353 LOC106596877 coding downstream 173496 7537291 ~ 7543177 (+)
LOC110485355 LOC106593569 coding downstream 182552 7546347 ~ 7561297 (+)
LOC110487504 LOC106593600 coding downstream 202355 7566150 ~ 7599621 (+)
LOC110513544 LOC106564138 coding downstream 319907 7683702 ~ 7856746 (+)
G1416578 NA non-coding upstream 37447 7325144 ~ 7325984 (+)
G1416575 NA non-coding upstream 40980 7321883 ~ 7322451 (+)
G1416536 LOC106564044 non-coding upstream 104015 7062701 ~ 7259416 (+)
G1416554 NA non-coding upstream 115528 7247628 ~ 7247903 (+)
G1416544 NA non-coding upstream 164435 7198750 ~ 7198996 (+)
G1416593 NA non-coding downstream 177 7363972 ~ 7364266 (+)
G1416605 NA non-coding downstream 48557 7412352 ~ 7413109 (+)
G1417284 NA non-coding downstream 59102 7422897 ~ 7423205 (+)
G1417285 LOC106595473 non-coding downstream 62939 7426734 ~ 7429292 (+)
G1416559 NA other upstream 29132 7328055 ~ 7334299 (+)
G1416462 NA other upstream 593841 6752802 ~ 6769590 (+)
G1416452 NA other upstream 643037 6719787 ~ 6720394 (+)
G1416413 NA other upstream 713234 6618183 ~ 6650197 (+)
LOC118940005 LOC106593103 other upstream 838576 6523504 ~ 6578882 (+)
G1417359 LOC106594003 other downstream 238960 7602755 ~ 7606668 (+)
G1417508 NA other downstream 334132 7697927 ~ 7698422 (+)
G1417561 NA other downstream 471307 7835102 ~ 7835589 (+)
LOC118940250 LOC106564141 other downstream 707269 8070985 ~ 8141262 (+)

Expression


Co-expression Network