G1417359 (LOC106594003)


Basic Information

Item Value
gene id G1417359
gene name LOC106594003
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 7602755 ~ 7606668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1620948
agcagcacggccaggtggactgtggacagcaaggagtcaccatgccaggtagtcctgatgtCCATATTACAGCAGAGCCAGAGATGATCAAAACTCTCCACTGACCAGACAGTCAAATAACTGAAGACAAAAACTACAACATCAGAATTCAGTTTAAACATGTTTACTGTCACAGTTTCCATTATGTTTTTCCATAAGACTCAAAAACAGCCTTTTGAAACACACAACATTCCTCAATATCATCTGCCAAAGTATATACACTTAGGCCTAGATTCAATGAGATCATCAACCGACATAGCGGATGTTTTGGTGGCGTCTGAGGGGGAACTGTTGGAGCTGTCGACTATACATAGAAAGAATACACTCAGATTTAAAAATCATTAGACTGGCTGTAGATTACATCACATTTCAGTGTTCTGTTGCCATGTCTAGGCAACagggctgcatgggatttctgtgACTGTGCAAAACCGATTTgaggtataatgccaggagccgcttatggatttgacagctctagtGCAGTTCTACCTCCGACACCACTAAAGTGGATCTGATCGAAATAGAGCCCTAAAAATGTAGAACAAAAAAAATGATTTGCTATACACCACTGTGAAACATGTCAATATACTGTAAGTTCATTGAGTCTCTTAGGTATGTGTGTGGTGGAGGGGCGCTTGTTTCTTGGTGTGTAACTAAAGAGTTGTGGAAATGTTATCTTGAAGGACAAAGAACAGTCAATCAATAAATTAATCAATTTTTAAATCCATTGGTTGTAAACGGTAGCTGTGTAAAATGCTATGGGCAGCTTTCTGTTGccatgtctatgaatttgaggttgttttcccccattcccatcccttAGCCTTCTGTTGccatgtctatgaatttgaggtTGGTTTTCCCCATTCCCATCCCTCAGCTTGTTTATACCGAAGATGGAGTGTTGATCTCATCATCTTGGTGTTTTCAACCAAATGATCTTTGTCTTGGTCTGAGTCTTTATAAAGAGGTCTGGTCTTGGTCTTAGTATTCCAGGCTTGGTCTGAGTCTTTATGAAGAGGTCTGAGTCTCTCCAGTCTTGATCTGAGTCTTTATAAAGAGGTCCAGTCTTGGTCTTGGTCAGAGTCTGAGTCAGTATTAGAGTGTTGCGGGTCTTGACTCCATCGCTGCAGTATACCGGACCAATAGGGGGCGCTGTCTCTCCGGTGTGTCTTCTGGTGTTTCGTAAGAGCTCTTTTCTCTGAGAAACACTTGCCACAGTCAGGGCATTGGTACGGCTTTGCTCGAGGGCTCCGGTCTTGACTCAATCTCTGTTTTTTACCAGGCAAAGAGAAAGCAGAGTTGTGTGCCCCTGACccgtgtgtgttgctgtgtgtctctgttccGTGTGTGTTGCGCTGGTGTTTCTTCATGGCTTTCTTTTCAGTGAAACGCTTCCCGCAGTCGGGGCACTGGTACGGTTTCTCTCCGGTGTGCGTTAGTATGTGTGTTTTCAGCGTATTTGACTGAGAGAAACTCTTGTCGCAGTAAGTGCAGTGGTACGGTTTCTCACCTGAGTGTATGAGGCGGTGCCGTATTAAAGATGCACCATGCGAAAACTTCATGTCGCAGACGGAGCATTGGAAAGGTTTATCTCCCGTGTGCACCGTCTGGTGACGTTTCATGTATGACTTCTCAGTGAAGCGTTTGTCGCAATGGGAGcattggtaaggcttctctcctgtgtgcttTCGCTCGTGGATTACCAATCTATGCTTTGAATTGAATTCCTGGCCGCAAGTAAGGCACAGGAACGGATTCTTCTCTCTTACTTCCTTGTTCGTTTTTTGATGCTTGGTTCTCTGATGATTTGACAAGGCCTGAACCACCCTGAAGGTCTTCCCGCAGTCGGGGCAGAGGTGCTGTTTCTCCTCGTGGGTCACCACATGTTTCTTCAGCGCTCCAGATTCCATGAAACCTTTTCCACAGACAGAGCAGACGTGCGGCTTCGCTACTTGCTCTCCGTGCTGCGTTTTCTGATGTCTTCTCAAAGCTGAGTGGAAGCCGAAGCTCTTGCCGCAGTCGGCGCAGAGgtgaggtttctctccagtgtgggtCCGCAGGTGAGTCTCTAACCCTGCCTTAGAAGCCAGCCTCTTCCCACATTCAGGGCATGGCTCAGAGACCTGTGTCTTGCCTACCTTCTCTCCTTTATGTCTTCTAACATGTGTTCTAAGATTCGAAGAGTCGTTAAATTGCTTCCCGCAAAGGGGGCAAATGAAGGGTTTCTCCCCAGTGTGCATACGAAGGTGCCTTTGATAACTACTTGAGTGAGAGAAGCGTTTGTGGCATTGGGAGCAGCGAAATGGTTTCTCCCCGGTATGCGTTCTCTGGTGGCTTGTCAGCCTTTCCTTTGTTGGGAAATGGCGCTTGCATTCAGGGCATTGGAATTGGTCTCTGTTTAAACGATGCAATTTGGAATGATTCGTTAAGGTAAATAAGGATGCAAAAGTCTTTCCACAATCAGAACAGAGGTGAGGTTTCTCTTCCGAATGGATGGCTTGATGTTTTATTAAGTATCCAGAATCTCTAAAGCCTTTCCCACAGACAGAGCACATGTGGGGCTTCGCACTACCTGCTGCGTGAAGTGCCTGATGTCTTTTCAGAGACGACTGAAaagagaaactcttcccacagtcagcaCAGAGgtgaggtttctctccagtgtgggtTCTTTGATGGGACCTCAAGGCTCCTGGTTGATTAAAGACTTTCCCACACACTGAACATTCGTGCCGTTTCACTCCTCCGTGCTCTGCATGACTAAGTTTCTGATGTTTGGTCAAGGAGGGACGGaaagcaaagctcttcccacagtcGGGGCAGACGTGAGGTTTCTCTACAGTGTGGGTCTTCAGGTGAATGTTTAGTCTTGTCTTGGTTGACAACTTCTTCCCACAGTGAGAACATGGATGAAGGACTGGCTTCTTTACGGTCTCCTCCTGTTCTGAAGAACCAACATTGTTTTCGGAAGGTTTCTCTTTGGAATGCTCTCCGGAGTGAGTTCTTTTCATGTGTTTCTTCAAGTTTCCTGGATCATTAAAAGGCTTGCCACAACGAGGGCAAATGTATGGTTTCTCCCCAGTATGAGTTCTCAGATGCCTCTTAAGACTAGACAATTCCTTGAATCCCTTCCCGCAGTCAGAGCACTGgtgaggtttctctcctgtgtgggttACCAGGTGCTCCTCCAAAGCCTTCTTTGTGGGAAACTTCTCCCCACAGTGAGGACATGGTTCACGGTAGAGCCTCTCCACACCCAACATCTCTCCTGGGTGAGCTCTCCTGATGTGTTTCTTCAAGTTTCCTGGATCATTGAAACCTTTCTTACAACGATGGCAAACGtacggtttctctccagtgtgagttAGCAGATGTCTCCTAAGACTGGAATGTGTACTGAATGTCTTTCCGCATTCAGAGCATGTGGTTTCAGAAACATGACATTTCTCTCCAGTATGAGTTTTCAGATGCCTGGTAAGGCTGGAAAATGTACTGAATACTTTTCCACATTCAGCGCATATAtttttctgtttctctccagtgtgagttAGCAGATGTCGCTCCAGAATGTCTTTTGTGGCAagactcttcccacactgagcaCAGGAGTGGGTTTTCTTGGAGGTTTTCTGCCCCGGTGGTTTCCTGCAGTCCATCAGCTGCACAGACACCCTCTTCAGACCCCAAATTAAGGCGGTACCGGGAGAGGCACGACACAGGGTCTTCGGTGGGCGACGTTTGTCCTAGAAATCACAAAAAGAGACTAAATTAATCAGGATGGGAAACCC

Function

NR:

description
zinc finger protein 665-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1620948 True 3833 TUCP 0.47 3 7602755 7606668

Neighbor

gene id symbol gene type direction distance location
LOC110487504 LOC106593600 coding upstream 3134 7566150 ~ 7599621 (+)
LOC110485355 LOC106593569 coding upstream 41458 7546347 ~ 7561297 (+)
LOC110485353 LOC106596877 coding upstream 59578 7537291 ~ 7543177 (+)
LOC118940246 NA coding upstream 221501 7365617 ~ 7381649 (+)
LOC110514651 LOC106595305 coding upstream 941977 6636106 ~ 6660778 (+)
LOC110513544 LOC106564138 coding downstream 77034 7683702 ~ 7856746 (+)
LOC118936549 LOC106590476 coding downstream 442014 8048682 ~ 8070845 (+)
LOC118940250 LOC106564141 coding downstream 464317 8070985 ~ 8141262 (+)
LOC118940075 LOC106564154 coding downstream 640019 8246687 ~ 8250437 (+)
LOC110499479 ubl5 coding downstream 777713 8384381 ~ 8392496 (+)
G1417353 NA non-coding upstream 17536 7584865 ~ 7585219 (+)
G1417352 NA non-coding upstream 18555 7583763 ~ 7584200 (+)
G1417351 NA non-coding upstream 19080 7583252 ~ 7583675 (+)
G1417334 NA non-coding upstream 68650 7533110 ~ 7534105 (+)
G1417333 NA non-coding upstream 70389 7531887 ~ 7532366 (+)
G1417372 NA non-coding downstream 26247 7632915 ~ 7633177 (+)
G1417482 NA non-coding downstream 55481 7662149 ~ 7663503 (+)
G1417493 NA non-coding downstream 68104 7674772 ~ 7675027 (+)
G1417497 NA non-coding downstream 77849 7684517 ~ 7684752 (+)
G1417500 NA non-coding downstream 81671 7688339 ~ 7688614 (+)
G1416559 NA other upstream 268456 7328055 ~ 7334299 (+)
G1416462 NA other upstream 833165 6752802 ~ 6769590 (+)
G1416452 NA other upstream 882361 6719787 ~ 6720394 (+)
G1416413 NA other upstream 952558 6618183 ~ 6650197 (+)
LOC118940005 LOC106593103 other upstream 1077900 6523504 ~ 6578882 (+)
G1417508 NA other downstream 91259 7697927 ~ 7698422 (+)
G1417561 NA other downstream 228434 7835102 ~ 7835589 (+)
G1417618 NA other downstream 526516 8133184 ~ 8135426 (+)

Expression


Co-expression Network