G1418141


Basic Information

Item Value
gene id G1418141
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 8855787 ~ 8868598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622214
ctagtccaacgctctaaccactaagctacccTGCCGCTGGTGGCCACCGGGCTTCCTGAGTTGGTATCGATAAATGTTCAATGAATTAACCGTCACAACTAAGCCAATATGACAACAATTAGGATCAACGTGAATTTGCAAATCAATCTGAATGAAGGTCAACACACGCCTCTTGTCTCGTTCGAATCAGTGGCAGAGAACCTCATAACAGGGCCGTTACAGAGAACCTCATAACAGGGCCGTTACAGAGAACCTCATAACAGGGCCGTTACAGAGAACCTCATAACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622214 True 290 lncRNA 0.47 2 8855787 8868598

Neighbor

gene id symbol gene type direction distance location
LOC110494879 NA coding upstream 19368 8832523 ~ 8836419 (+)
LOC110485370 LOC106564160 coding upstream 34624 8817375 ~ 8821163 (+)
LOC110494882 LOC106593417 coding upstream 48127 8791198 ~ 8807660 (+)
LOC110485368 LOC105027472 coding upstream 65672 8761682 ~ 8790721 (+)
LOC118940253 NA coding upstream 367201 8487647 ~ 8488586 (+)
LOC110495027 LOC106593382 coding downstream 21184 8889782 ~ 8908924 (+)
LOC110495028 LOC106593387 coding downstream 96211 8964809 ~ 8984789 (+)
LOC110513340 LOC106593387 coding downstream 161895 9030493 ~ 9049651 (+)
LOC110519048 LOC106593387 coding downstream 217594 9086192 ~ 9109227 (+)
LOC110513772 LOC106593162 coding downstream 283538 9152136 ~ 9219692 (+)
G1418097 NA non-coding upstream 46457 8782508 ~ 8809330 (+)
G1418108 NA non-coding upstream 54285 8800495 ~ 8801502 (+)
G1418107 NA non-coding upstream 54632 8799264 ~ 8801155 (+)
G1418076 NA non-coding upstream 145125 8709903 ~ 8710662 (+)
G1418044 NA non-coding upstream 162175 8640055 ~ 8693612 (+)
G1418171 NA non-coding downstream 86074 8954672 ~ 9010484 (+)
G1418175 NA non-coding downstream 119230 8987828 ~ 8994604 (+)
G1418179 NA non-coding downstream 141106 9009704 ~ 9066782 (+)
G1418184 NA non-coding downstream 190025 9058623 ~ 9084743 (+)
G1418211 NA non-coding downstream 304498 9173096 ~ 9219467 (+)
G1418037 LOC106594248 other upstream 274636 8578605 ~ 8581151 (+)
LOC110516831 LOC106593980 other upstream 365506 8452099 ~ 8491706 (+)
LOC110499479 ubl5 other upstream 463306 8384381 ~ 8392496 (+)
G1417938 NA other upstream 485277 8369841 ~ 8370510 (+)
LOC110485387 LOC106593109 other downstream 365874 9234394 ~ 9247725 (+)
LOC110487204 LOC106593073 other downstream 414628 9281428 ~ 9295974 (+)
LOC110510627 LOC106593081 other downstream 435969 9304567 ~ 9515031 (+)
LOC110493376 LOC106564189 other downstream 720491 9581609 ~ 9592897 (+)

Expression


Co-expression Network