G1418171


Basic Information

Item Value
gene id G1418171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 8954672 ~ 9010484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622246
TATATAATTGCGATACTAAAGTTGACTGTTATTATGACTGTTTGACATGTTATGACTTTTTGGTTCATAAATTGCAGGACTATGAAGCAGAGGCTCCTATCATCAGGTCTTCAGTCATCCTAGATATAACAGCTGCCATAGATGTCAAGGCTATTACCAAATCAGCAGTTAAACTAGACAACTTCCCATTCAACACCTTCTATTCAACTCATTCACAGGCAGACAAGAACACTTCCCATTTTCCCCATGATTTAAATCAGTCTTCCAATTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622246 True 273 lncRNA 0.37 2 8954672 9010484

Neighbor

gene id symbol gene type direction distance location
LOC110485385 LOC106564166 coding upstream 16551 8842569 ~ 8938121 (+)
LOC110495027 LOC106593382 coding upstream 45748 8889782 ~ 8908924 (+)
LOC110494879 NA coding upstream 118253 8832523 ~ 8836419 (+)
LOC110485370 LOC106564160 coding upstream 133509 8817375 ~ 8821163 (+)
LOC110494882 LOC106593417 coding upstream 147012 8791198 ~ 8807660 (+)
LOC110513340 LOC106593387 coding downstream 20009 9030493 ~ 9049651 (+)
LOC110519048 LOC106593387 coding downstream 75708 9086192 ~ 9109227 (+)
LOC110513772 LOC106593162 coding downstream 141652 9152136 ~ 9219692 (+)
LOC110485387 LOC106593109 coding downstream 223910 9234394 ~ 9247725 (+)
LOC110494875 LOC106586284 coding downstream 250174 9260658 ~ 9273973 (+)
G1418141 NA non-coding upstream 86074 8855787 ~ 8868598 (+)
G1418097 NA non-coding upstream 145342 8782508 ~ 8809330 (+)
G1418108 NA non-coding upstream 153170 8800495 ~ 8801502 (+)
G1418107 NA non-coding upstream 153517 8799264 ~ 8801155 (+)
G1418184 NA non-coding downstream 48139 9058623 ~ 9084743 (+)
G1418211 NA non-coding downstream 162612 9173096 ~ 9219467 (+)
G1418255 NA non-coding downstream 247097 9257581 ~ 9258140 (+)
G1418270 NA non-coding downstream 289838 9300322 ~ 9355452 (+)
LOC110485368 LOC105027472 other upstream 163951 8761682 ~ 8790721 (+)
G1418037 LOC106594248 other upstream 373521 8578605 ~ 8581151 (+)
LOC110516831 LOC106593980 other upstream 464391 8452099 ~ 8491706 (+)
LOC110499479 ubl5 other upstream 562191 8384381 ~ 8392496 (+)
G1417938 NA other upstream 584162 8369841 ~ 8370510 (+)
LOC110487204 LOC106593073 other downstream 272742 9281428 ~ 9295974 (+)
LOC110510627 LOC106593081 other downstream 294083 9304567 ~ 9515031 (+)
LOC110493376 LOC106564189 other downstream 578605 9581609 ~ 9592897 (+)

Expression


Co-expression Network