G1418175


Basic Information

Item Value
gene id G1418175
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 8987828 ~ 8994604 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622250
ctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtattggtagatttgcagtggtctgatactccttccatttcaatattattgcttgcacagtgccccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactaccacagtgcaggtgcatttatac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622250 True 277 lncRNA 0.44 2 8987828 8994604

Neighbor

gene id symbol gene type direction distance location
LOC110495028 LOC106593387 coding upstream 3039 8964809 ~ 8984789 (+)
LOC110485385 LOC106564166 coding upstream 49707 8842569 ~ 8938121 (+)
LOC110495027 LOC106593382 coding upstream 78904 8889782 ~ 8908924 (+)
LOC110494879 NA coding upstream 151409 8832523 ~ 8836419 (+)
LOC110485370 LOC106564160 coding upstream 166665 8817375 ~ 8821163 (+)
LOC110513340 LOC106593387 coding downstream 35889 9030493 ~ 9049651 (+)
LOC110519048 LOC106593387 coding downstream 91588 9086192 ~ 9109227 (+)
LOC110513772 LOC106593162 coding downstream 157532 9152136 ~ 9219692 (+)
LOC110485387 LOC106593109 coding downstream 239790 9234394 ~ 9247725 (+)
LOC110494875 LOC106586284 coding downstream 266054 9260658 ~ 9273973 (+)
G1418141 NA non-coding upstream 119230 8855787 ~ 8868598 (+)
G1418097 NA non-coding upstream 178498 8782508 ~ 8809330 (+)
G1418108 NA non-coding upstream 186326 8800495 ~ 8801502 (+)
G1418107 NA non-coding upstream 186673 8799264 ~ 8801155 (+)
G1418179 NA non-coding downstream 15100 9009704 ~ 9066782 (+)
G1418184 NA non-coding downstream 64019 9058623 ~ 9084743 (+)
G1418211 NA non-coding downstream 178492 9173096 ~ 9219467 (+)
G1418255 NA non-coding downstream 262977 9257581 ~ 9258140 (+)
LOC110485368 LOC105027472 other upstream 197107 8761682 ~ 8790721 (+)
G1418037 LOC106594248 other upstream 406677 8578605 ~ 8581151 (+)
LOC110516831 LOC106593980 other upstream 497547 8452099 ~ 8491706 (+)
LOC110499479 ubl5 other upstream 595347 8384381 ~ 8392496 (+)
G1417938 NA other upstream 617318 8369841 ~ 8370510 (+)
LOC110487204 LOC106593073 other downstream 288622 9281428 ~ 9295974 (+)
LOC110510627 LOC106593081 other downstream 309963 9304567 ~ 9515031 (+)
LOC110493376 LOC106564189 other downstream 594485 9581609 ~ 9592897 (+)

Expression


Co-expression Network