G1418119 (LOC106593154)


Basic Information

Item Value
gene id G1418119
gene name LOC106593154
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 9485489 ~ 9485987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622107
ATTTTATATTGAAATGTTTTTGATCATTTCGATGAGTTTTCAAGAAATTGAGTAATTGCACAAACTTGAATACTTTTCAGATCAGGATTACCTCCTTAGTGCCGTCAGGTTTCGTGACTGTCACAGTACACTTCCCTTCAGCCCTGGCAGTGACCAGACCCTTAAGGTACAGCTCCGCCTTGTCTGCCACATAGCAGGCATTCTTTGAATCAAAGGGTGCGGCTTGtgcctccatcctctccttctcaGATTTACGGAGGTATATGGCAGCCTTGCCGTAGATTTTCATCTCCGCGTCCGTACTCATGGTGACGGATAACTTTATTTTTTCCCTCCTACAGATGAATGTGTACTTCTTAGAGGACCC

Function

NR:

description
PREDICTED: myosin-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622107 True 367 lncRNA 0.44 2 9485489 9485987

Neighbor

gene id symbol gene type direction distance location
LOC110510627 LOC106593081 coding upstream 28990 9304567 ~ 9515031 (+)
LOC110487204 LOC106593073 coding upstream 189515 9281428 ~ 9295974 (+)
LOC110494875 LOC106586284 coding upstream 211516 9260658 ~ 9273973 (+)
LOC110485387 LOC106593109 coding upstream 237764 9234394 ~ 9247725 (+)
LOC110513772 LOC106593162 coding upstream 265797 9152136 ~ 9219692 (+)
LOC110493376 LOC106564189 coding downstream 95622 9581609 ~ 9592897 (+)
LOC110510389 LOC106592846 coding downstream 114347 9600334 ~ 9685183 (+)
mvb12a LOC106564207 coding downstream 261321 9747308 ~ 9772113 (+)
LOC110518985 LOC106593960 coding downstream 289492 9775479 ~ 9780712 (+)
LOC110517298 LOC106564086 coding downstream 299806 9785793 ~ 9804783 (+)
G1418319 NA non-coding upstream 63264 9420765 ~ 9422225 (+)
G1418274 NA non-coding upstream 113776 9319657 ~ 9371713 (+)
G1418298 NA non-coding upstream 115020 9370029 ~ 9370469 (+)
G1418126 NA non-coding upstream 117439 9313938 ~ 9368050 (+)
G1418272 NA non-coding upstream 122301 9309909 ~ 9363188 (+)
G1418352 NA non-coding downstream 50806 9536793 ~ 9537078 (+)
G1418359 LOC106591926 non-coding downstream 59538 9545525 ~ 9546046 (+)
G1418360 NA non-coding downstream 63877 9549864 ~ 9550087 (+)
G1418363 NA non-coding downstream 65641 9551628 ~ 9551876 (+)
G1418367 NA non-coding downstream 69608 9555595 ~ 9568379 (+)
LOC110519048 LOC106593387 other upstream 376274 9086192 ~ 9109227 (+)
LOC110485368 LOC105027472 other upstream 694768 8761682 ~ 8790721 (+)
G1418037 LOC106594248 other upstream 904338 8578605 ~ 8581151 (+)
G1418488 LOC106564225 other downstream 452486 9938473 ~ 9939331 (+)
G1418476 LOC106592804 other downstream 546860 10032847 ~ 10034985 (+)
G1418503 NA other downstream 550978 10036965 ~ 10057136 (+)

Expression


Co-expression Network