Gene
RNA
| Item | Value |
|---|---|
| gene id | G1418397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 9618472 ~ 9654573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1622502 | False | 451 | lncRNA | 0.42 | 2 | 9618472 | 9652422 |
| TU1622503 | True | 239 | lncRNA | 0.41 | 3 | 9649243 | 9654573 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493376 | LOC106564189 | coding | upstream | 26161 | 9581609 ~ 9592897 (+) |
| LOC110510627 | LOC106593081 | coding | upstream | 161973 | 9304567 ~ 9515031 (+) |
| LOC110487204 | LOC106593073 | coding | upstream | 322498 | 9281428 ~ 9295974 (+) |
| LOC110494875 | LOC106586284 | coding | upstream | 344499 | 9260658 ~ 9273973 (+) |
| LOC110485387 | LOC106593109 | coding | upstream | 370747 | 9234394 ~ 9247725 (+) |
| mvb12a | LOC106564207 | coding | downstream | 92735 | 9747308 ~ 9772113 (+) |
| LOC110518985 | LOC106593960 | coding | downstream | 120906 | 9775479 ~ 9780712 (+) |
| LOC110517298 | LOC106564086 | coding | downstream | 131220 | 9785793 ~ 9804783 (+) |
| LOC110516202 | LOC106593004 | coding | downstream | 154554 | 9809127 ~ 9871028 (+) |
| LOC110485424 | LOC106592905 | coding | downstream | 234928 | 9889501 ~ 9924663 (+) |
| G1418395 | NA | non-coding | upstream | 12787 | 9605231 ~ 9605685 (+) |
| G1418394 | NA | non-coding | upstream | 14724 | 9603175 ~ 9603748 (+) |
| G1418391 | NA | non-coding | upstream | 24280 | 9593775 ~ 9594192 (+) |
| G1418367 | NA | non-coding | upstream | 50093 | 9555595 ~ 9568379 (+) |
| G1418407 | NA | non-coding | downstream | 11801 | 9666374 ~ 9666579 (+) |
| G1418411 | NA | non-coding | downstream | 36556 | 9691129 ~ 9691396 (+) |
| G1418420 | NA | non-coding | downstream | 39025 | 9693598 ~ 9694651 (+) |
| G1418430 | NA | non-coding | downstream | 50957 | 9705530 ~ 9708234 (+) |
| G1418440 | NA | non-coding | downstream | 88614 | 9743187 ~ 9744594 (+) |
| LOC110510389 | LOC106592846 | other | upstream | 3524 | 9600334 ~ 9685183 (+) |
| G1418488 | LOC106564225 | other | downstream | 283900 | 9938473 ~ 9939331 (+) |
| G1418476 | LOC106592804 | other | downstream | 378274 | 10032847 ~ 10034985 (+) |
| G1418503 | NA | other | downstream | 382392 | 10036965 ~ 10057136 (+) |
| G1418740 | NA | other | downstream | 1010441 | 10665014 ~ 10666546 (+) |
| G1418812 | NA | other | downstream | 1236466 | 10891039 ~ 10893394 (+) |
