G1418400


Basic Information

Item Value
gene id G1418400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 9628778 ~ 9634519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622507
cacctgtactcactgtcatagtcagttctacagttctaccctcatatgttacatcacctgtactcactgtcatagtcagttctaccctcatatgttacatcacctgtactcactgtcatagtcagttctaccctcatatgttacatcacctgtactcactgtcatagtcagttctacagttctaccctcatatgttacatcacctgtactcactgtcatagtcagttctaccctcatatgttacatcacctgtactcactgtaatagtcagttctaccctcatttgttacatcacctgtactcactgtcatagtcagttctacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622507 True 324 lncRNA 0.41 2 9628778 9634519

Neighbor

gene id symbol gene type direction distance location
LOC110493376 LOC106564189 coding upstream 36467 9581609 ~ 9592897 (+)
LOC110510627 LOC106593081 coding upstream 172279 9304567 ~ 9515031 (+)
LOC110487204 LOC106593073 coding upstream 332804 9281428 ~ 9295974 (+)
LOC110494875 LOC106586284 coding upstream 354805 9260658 ~ 9273973 (+)
LOC110485387 LOC106593109 coding upstream 381053 9234394 ~ 9247725 (+)
mvb12a LOC106564207 coding downstream 112789 9747308 ~ 9772113 (+)
LOC110518985 LOC106593960 coding downstream 140960 9775479 ~ 9780712 (+)
LOC110517298 LOC106564086 coding downstream 151274 9785793 ~ 9804783 (+)
LOC110516202 LOC106593004 coding downstream 174608 9809127 ~ 9871028 (+)
LOC110485424 LOC106592905 coding downstream 254982 9889501 ~ 9924663 (+)
G1418395 NA non-coding upstream 23093 9605231 ~ 9605685 (+)
G1418394 NA non-coding upstream 25030 9603175 ~ 9603748 (+)
G1418391 NA non-coding upstream 34586 9593775 ~ 9594192 (+)
G1418367 NA non-coding upstream 60399 9555595 ~ 9568379 (+)
G1418407 NA non-coding downstream 31855 9666374 ~ 9666579 (+)
G1418411 NA non-coding downstream 56610 9691129 ~ 9691396 (+)
G1418420 NA non-coding downstream 59079 9693598 ~ 9694651 (+)
G1418430 NA non-coding downstream 71011 9705530 ~ 9708234 (+)
G1418440 NA non-coding downstream 108668 9743187 ~ 9744594 (+)
LOC110510389 LOC106592846 other upstream 13830 9600334 ~ 9685183 (+)
G1418488 LOC106564225 other downstream 303954 9938473 ~ 9939331 (+)
G1418476 LOC106592804 other downstream 398328 10032847 ~ 10034985 (+)
G1418503 NA other downstream 402446 10036965 ~ 10057136 (+)
G1418740 NA other downstream 1030495 10665014 ~ 10666546 (+)
G1418812 NA other downstream 1256520 10891039 ~ 10893394 (+)

Expression


Co-expression Network