G1418440


Basic Information

Item Value
gene id G1418440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 9743187 ~ 9744594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1622555
aggctgtaatcgctgccaaagatgcttcaacaaagtactgagtaaagggtctgaatacttatgtaaatgtgatatgtcaaattctaaaaacatgtttttgctttgtcattatggggtattgtgtgtaaattaatGAGGGGAAGAAACTATTTcgtaaattttagaataaggctgtaatgtaacaaaatgtggaaatagtcaaggggtctgaatactttccgaaatgcGCTGTAtgcccctccctctctgcatTTCATCGTGTGACAgtatatatctgtctgtgtgatagtatatatctgtctgtgtgtgacagtatatatctgtgtgtgacAGTATATATCTGTCTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1622555 True 347 lncRNA 0.36 2 9743187 9744594

Neighbor

gene id symbol gene type direction distance location
LOC110510389 LOC106592846 coding upstream 58004 9600334 ~ 9685183 (+)
LOC110493376 LOC106564189 coding upstream 150876 9581609 ~ 9592897 (+)
LOC110510627 LOC106593081 coding upstream 286688 9304567 ~ 9515031 (+)
LOC110487204 LOC106593073 coding upstream 447213 9281428 ~ 9295974 (+)
LOC110494875 LOC106586284 coding upstream 469214 9260658 ~ 9273973 (+)
mvb12a LOC106564207 coding downstream 2714 9747308 ~ 9772113 (+)
LOC110518985 LOC106593960 coding downstream 30885 9775479 ~ 9780712 (+)
LOC110517298 LOC106564086 coding downstream 41199 9785793 ~ 9804783 (+)
LOC110516202 LOC106593004 coding downstream 64533 9809127 ~ 9871028 (+)
LOC110485424 LOC106592905 coding downstream 144907 9889501 ~ 9924663 (+)
G1418430 NA non-coding upstream 34953 9705530 ~ 9708234 (+)
G1418420 NA non-coding upstream 48536 9693598 ~ 9694651 (+)
G1418411 NA non-coding upstream 51791 9691129 ~ 9691396 (+)
G1418407 NA non-coding upstream 76608 9666374 ~ 9666579 (+)
G1418397 NA non-coding upstream 88614 9618472 ~ 9654573 (+)
G1418442 NA non-coding downstream 24604 9769198 ~ 9769852 (+)
G1418444 NA non-coding downstream 37617 9782211 ~ 9782574 (+)
G1418447 NA non-coding downstream 40204 9784798 ~ 9785060 (+)
G1418449 NA non-coding downstream 63437 9808031 ~ 9808293 (+)
LOC110485387 LOC106593109 other upstream 496496 9234394 ~ 9247725 (+)
G1418488 LOC106564225 other downstream 193879 9938473 ~ 9939331 (+)
G1418476 LOC106592804 other downstream 288253 10032847 ~ 10034985 (+)
G1418503 NA other downstream 292371 10036965 ~ 10057136 (+)
G1418740 NA other downstream 920420 10665014 ~ 10666546 (+)
G1418812 NA other downstream 1146445 10891039 ~ 10893394 (+)

Expression


Co-expression Network