G1418447



Basic Information


Item Value
gene id G1418447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 9784798 ~ 9785060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1622562
atgaGGGGCTATGCATTCCATGGAAAATAATGAAGGAGGTGGAAGGTGTGttctgaattctgattggctgaaagccatggtatatcacagtataccatgggtatgataaaacatttatttttactgctctaattacgttggcaaCCAGttgataatagcaataaggctcctctggggtttgtgatatattgccaatataccacggctaagggctgtgtccatgCACTCCGCGTTCCTAAATACAACcattagtcgtggtatat

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1622562 True 263 lncRNA 0.41 1 9784798 9785060

Neighbor


gene id symbol gene type direction distance location
LOC110518985 LOC106593960 coding upstream 4086 9775479 ~ 9780712 (+)
mvb12a LOC106564207 coding upstream 12685 9747308 ~ 9772113 (+)
LOC110510389 LOC106592846 coding upstream 99615 9600334 ~ 9685183 (+)
LOC110493376 LOC106564189 coding upstream 192487 9581609 ~ 9592897 (+)
LOC110510627 LOC106593081 coding upstream 328299 9304567 ~ 9515031 (+)
LOC110517298 LOC106564086 coding downstream 733 9785793 ~ 9804783 (+)
LOC110516202 LOC106593004 coding downstream 24067 9809127 ~ 9871028 (+)
LOC110485424 LOC106592905 coding downstream 104441 9889501 ~ 9924663 (+)
LOC110487212 LOC106564193 coding downstream 176170 9961230 ~ 10002435 (+)
LOC118940260 LOC106594684 coding downstream 227435 10012495 ~ 10031963 (+)
G1418444 NA non-coding upstream 2224 9782211 ~ 9782574 (+)
G1418442 NA non-coding upstream 14946 9769198 ~ 9769852 (+)
G1418440 NA non-coding upstream 40204 9743187 ~ 9744594 (+)
G1418430 NA non-coding upstream 76564 9705530 ~ 9708234 (+)
G1418420 NA non-coding upstream 90147 9693598 ~ 9694651 (+)
G1418449 NA non-coding downstream 22971 9808031 ~ 9808293 (+)
G1418450 NA non-coding downstream 38415 9823475 ~ 9823768 (+)
G1418451 NA non-coding downstream 47523 9832583 ~ 9833145 (+)
G1418455 NA non-coding downstream 51523 9836583 ~ 9837599 (+)
LOC110487204 LOC106593073 other upstream 495701 9281428 ~ 9295974 (+)
LOC110485387 LOC106593109 other upstream 538107 9234394 ~ 9247725 (+)
G1418488 LOC106564225 other downstream 153413 9938473 ~ 9939331 (+)
G1418476 LOC106592804 other downstream 247787 10032847 ~ 10034985 (+)
G1418503 NA other downstream 251905 10036965 ~ 10057136 (+)
G1418740 NA other downstream 879954 10665014 ~ 10666546 (+)
G1418812 NA other downstream 1105979 10891039 ~ 10893394 (+)

Expression



Co-expression Network