Gene
RNA
| Item | Value |
|---|---|
| gene id | G1419562 |
| gene name | LOC106594674 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 10000264 ~ 10001920 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calmodulin-regulated spectrin-associated protein 3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1624107 | False | 1332 | lncRNA | 0.48 | 2 | 10000264 | 10001920 |
| TU1624108 | False | 1267 | lncRNA | 0.48 | 3 | 10000264 | 10001920 |
| TU1624109 | False | 1397 | TUCP | 0.48 | 2 | 10000264 | 10001920 |
| TU1624114 | True | 1267 | lncRNA | 0.48 | 2 | 10000264 | 10001920 |
9,996,400
9,996,800
9,997,200
9,997,600
9,998,000
9,998,400
9,998,800
9,999,200
9,999,600
10,000,000
10,000,400
10,000,800
10,001,200
10,001,600
10,002,000
10,002,400
10,002,800
10,003,200
10,003,600
NC_048581.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515700 | LOC106564225 | coding | downstream | 42245 | 9946867 ~ 9958019 (-) |
| LOC110485421 | LOC106564225 | coding | downstream | 53581 | 9938616 ~ 9946683 (-) |
| LOC118940258 | LOC106592926 | coding | downstream | 72824 | 9877109 ~ 9927440 (-) |
| LOC110494887 | LOC106564206 | coding | downstream | 265760 | 9694821 ~ 9734504 (-) |
| LOC110495039 | LOC106564202 | coding | downstream | 422497 | 9566446 ~ 9577767 (-) |
| LOC110485398 | LOC106592804 | coding | upstream | 30925 | 10032845 ~ 10041527 (-) |
| LOC110485396 | LOC106592812 | coding | upstream | 54949 | 10055343 ~ 10085865 (-) |
| LOC110512963 | NA | coding | upstream | 86712 | 10088632 ~ 10095333 (-) |
| LOC110518414 | NA | coding | upstream | 96739 | 10098659 ~ 10408127 (-) |
| LOC118940263 | LOC106592855 | coding | upstream | 128974 | 10130894 ~ 10132675 (-) |
| G1419550 | NA | non-coding | downstream | 17619 | 9982134 ~ 9982645 (-) |
| G1419544 | LOC106564230 | non-coding | downstream | 29350 | 9970313 ~ 9970914 (-) |
| G1419546 | NA | non-coding | downstream | 34935 | 9965001 ~ 9965329 (-) |
| G1419536 | NA | non-coding | downstream | 58333 | 9941624 ~ 9941931 (-) |
| G1419561 | NA | non-coding | upstream | 954 | 10002874 ~ 10004472 (-) |
| G1419566 | NA | non-coding | upstream | 9149 | 10011069 ~ 10012069 (-) |
| G1419575 | NA | non-coding | upstream | 50763 | 10052683 ~ 10053314 (-) |
| G1419591 | NA | non-coding | upstream | 85365 | 10087285 ~ 10087525 (-) |
| G1419593 | LOC106592827 | non-coding | upstream | 87384 | 10089304 ~ 10224191 (-) |
| G1419490 | LOC106593004 | other | downstream | 143020 | 9856191 ~ 9857244 (-) |
| G1419452 | NA | other | downstream | 248050 | 9751033 ~ 9752214 (-) |
| G1419424 | NA | other | downstream | 342932 | 9649888 ~ 9659873 (-) |
| G1419159 | NA | other | downstream | 436820 | 9562137 ~ 9563444 (-) |
| G1419592 | NA | other | upstream | 91645 | 10093565 ~ 10102496 (-) |
| G1419678 | NA | other | upstream | 323665 | 10325585 ~ 10344005 (-) |
| G1419692 | NA | other | upstream | 361251 | 10363171 ~ 10441246 (-) |
| G1419709 | NA | other | upstream | 380237 | 10382157 ~ 10773626 (-) |
