Gene
RNA
| Item | Value |
|---|---|
| gene id | G1418869 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 11056783 ~ 11059136 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105896272 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1623147 | False | 327 | lncRNA | 0.37 | 2 | 11056783 | 11057145 |
| TU1623148 | True | 732 | lncRNA | 0.36 | 2 | 11056783 | 11059136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519518 | tmed1 | coding | upstream | 83289 | 10925408 ~ 10979025 (+) |
| LOC110514169 | LOC106592431 | coding | upstream | 130112 | 10923424 ~ 10926671 (+) |
| LOC110513836 | LOC106593267 | coding | upstream | 174524 | 10874997 ~ 10882259 (+) |
| LOC118940259 | LOC106593267 | coding | upstream | 182402 | 10774540 ~ 10874381 (+) |
| LOC110485427 | LOC106593320 | coding | upstream | 282558 | 10740240 ~ 10774472 (+) |
| LOC118940268 | LOC106564237 | coding | downstream | 232043 | 11291179 ~ 11293091 (+) |
| LOC110516761 | LOC106592646 | coding | downstream | 255475 | 11314611 ~ 11324506 (+) |
| LOC110485442 | NA | coding | downstream | 265749 | 11324885 ~ 11354057 (+) |
| LOC110485441 | LOC106597237 | coding | downstream | 370598 | 11429729 ~ 11430780 (+) |
| LOC118940078 | NA | coding | downstream | 386126 | 11445262 ~ 11448843 (+) |
| G1418854 | NA | non-coding | upstream | 22335 | 11033060 ~ 11034448 (+) |
| G1418852 | LOC106593274 | non-coding | upstream | 24716 | 11024734 ~ 11032067 (+) |
| G1418853 | NA | non-coding | upstream | 26651 | 11029482 ~ 11030132 (+) |
| G1418830 | NA | non-coding | upstream | 29518 | 10954163 ~ 11027265 (+) |
| G1418843 | NA | non-coding | upstream | 44503 | 10999812 ~ 11012280 (+) |
| G1418877 | NA | non-coding | downstream | 12127 | 11071263 ~ 11071705 (+) |
| G1418888 | NA | non-coding | downstream | 52734 | 11111870 ~ 11115224 (+) |
| G1418911 | NA | non-coding | downstream | 119641 | 11178777 ~ 11180126 (+) |
| G1418925 | NA | non-coding | downstream | 160132 | 11219268 ~ 11219931 (+) |
| G1418931 | NA | non-coding | downstream | 171213 | 11230349 ~ 11239071 (+) |
| G1418818 | NA | other | upstream | 76400 | 10973898 ~ 10980383 (+) |
| G1418812 | NA | other | upstream | 163389 | 10891039 ~ 10893394 (+) |
| G1418740 | NA | other | upstream | 390237 | 10665014 ~ 10666546 (+) |
| G1418503 | NA | other | upstream | 1017077 | 10036965 ~ 10057136 (+) |
| G1418476 | LOC106592804 | other | upstream | 1021798 | 10032847 ~ 10034985 (+) |
| G1418923 | NA | other | downstream | 155725 | 11214861 ~ 11216573 (+) |
| G1418947 | NA | other | downstream | 207239 | 11266375 ~ 11269283 (+) |
| G1420063 | NA | other | downstream | 412852 | 11471988 ~ 11473561 (+) |
| G1420067 | LOC106592457 | other | downstream | 508084 | 11567220 ~ 11568890 (+) |
