G1421844


Basic Information

Item Value
gene id G1421844
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13109044 ~ 13110001 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1627390
accaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtatttgaccaataacatctgctaaccatgtgtatgtgaccattaacatctactaaccatgtatgtgaccaataacatctgctaaccatgtatgtgaccaataacatctgctaaccatgtgtatgtgacaaataaaatgtgatttgaagtTTCAATACAAAGACTGTTTAACAACATGGAGGGCCGGTTTCCACAGATGAAGCCTAGCGCTTAGGATAAAAACCTATTACACTGGAGATTCATTCTCCTGCTTTTAGTTCCAGGACTTGGCTTAATCTGCGTCTGGGGAACCCGTCCCGCAACGTTCACATCACACATCAGGTGAGAGTGGGACTGCATCACAGGGAAAACTGGTCAGCCCATTGAGGGTTCAATAACTGATGGAACAGTCAATGGAACAGCCCATTGAGGGTTCAATAACTGATAGAACAGTCAATGGAACAGCCCATTGAGGGTTTAATAACTGATAGAACAGTCAATGGAACAGCCCATTGAGGGTTCAATAACTGATAGAACAGTCAATGGAACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1627390 True 614 lncRNA 0.42 3 13109044 13110001
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110487225 LOC106564346 coding downstream 9127 13085968 ~ 13099917 (-)
LOC110517809 LOC106564346 coding downstream 30848 13069840 ~ 13078196 (-)
LOC110514195 LOC106591784 coding downstream 46400 13029222 ~ 13062644 (-)
LOC110485474 LOC106591788 coding downstream 102890 12996108 ~ 13006154 (-)
LOC110485468 LOC106564320 coding downstream 160362 12941155 ~ 12948682 (-)
LOC110485477 LOC106564342 coding upstream 26849 13136850 ~ 13160471 (-)
LOC110485485 LOC106591843 coding upstream 71551 13181552 ~ 13220896 (-)
pcyt2 pcy2 coding upstream 112055 13222056 ~ 13254849 (-)
LOC110485494 LOC106591833 coding upstream 170561 13280562 ~ 13286294 (-)
LOC110485492 LOC106592221 coding upstream 176955 13286956 ~ 13300529 (-)
G1421813 NA non-coding downstream 39402 13069372 ~ 13069642 (-)
G1421812 NA non-coding downstream 41866 13066972 ~ 13067178 (-)
G1421807 NA non-coding downstream 59352 13048620 ~ 13049692 (-)
G1421789 NA non-coding downstream 84200 13023027 ~ 13024844 (-)
G1421788 LOC106591789 non-coding downstream 101919 13006159 ~ 13007125 (-)
G1421847 NA non-coding upstream 9259 13119260 ~ 13120096 (-)
G1421850 LOC106591798 non-coding upstream 13291 13123292 ~ 13124015 (-)
G1421861 NA non-coding upstream 66463 13176464 ~ 13177312 (-)
G1421830 NA non-coding upstream 111120 13221121 ~ 13221419 (-)
G1421877 NA non-coding upstream 151318 13261319 ~ 13262712 (-)
G1421744 NA other downstream 262887 12845797 ~ 12846157 (-)
G1421727 NA other downstream 325110 12781002 ~ 12783934 (-)
G1421689 NA other downstream 389874 12702672 ~ 12719170 (-)
LOC110515463 LOC106564142 other downstream 486443 12608888 ~ 12639486 (-)
G1421639 LOC106592110 other downstream 570603 12537032 ~ 12538441 (-)
LOC110485496 LOC106592261 other upstream 196673 13303807 ~ 13339705 (-)
G1422007 NA other upstream 470939 13580940 ~ 13581565 (-)

Expression

G1421844 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
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G1421844 Expression in each Bioproject

Bar chart with 17 bars.
G1421844 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network