G1422920 (LOC106591235)


Basic Information

Item Value
gene id G1422920
gene name LOC106591235
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 15397290 ~ 15413597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1628867
ATTGTTCATGTTTTGTGTAAGTGATAGTTTTAGATAGTTCTCTGACTTTAGATATGATTTATTTTTGACATGATGTCATTTGAGGTAGTATACTACAGTCCTGACCCTCTGACATATTCTCCTTTACTAGATGCTCCAAGGAAcacctcagtgtcagtcagtccctctggtgaaatagtggagggcagttcagtgactctgacctgcagcagtgatgccaacccacctgTGGACAAATACACCTGGTACAAGAAGAACGTAACCTCACCAAAAGCATCAGGACAGAGTTACAACATCACTAACATCATctctgaggacagaggagaatatTACTGTGAGGCCCAGAATGGAAGAGGATCTAATAACTCTACAGCTCTGATGATCATTGTAGCAGTGAAACAAACCTCAGTTCTGACTGCAGCTGTAGGAATCATAGTGGTTGTTCTGGttctcatcctct

Function

NR:

description
PREDICTED: B-cell receptor CD22-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1628867 True 460 TUCP 0.42 2 15397290 15413597

Neighbor

gene id symbol gene type direction distance location
LOC118940327 NA coding downstream 22173 15373361 ~ 15375117 (-)
LOC118940323 LOC106601626 coding downstream 50005 15317751 ~ 15347285 (-)
LOC118940319 LOC106564328 coding downstream 159872 15132799 ~ 15237418 (-)
LOC118940326 LOC106591409 coding downstream 218043 15176941 ~ 15179247 (-)
LOC118940325 LOC106598058 coding downstream 255476 15139726 ~ 15141814 (-)
LOC118936458 LOC106591490 coding upstream 30883 15444480 ~ 15468256 (-)
LOC118940331 NA coding upstream 201267 15614864 ~ 15626817 (-)
LOC110485613 LOC106591333 coding upstream 213951 15627128 ~ 15704265 (-)
LOC110487262 hoga1 coding upstream 330618 15744215 ~ 15760194 (-)
LOC110485609 LOC106591329 coding upstream 364090 15777687 ~ 15797879 (-)
G1423002 NA non-coding downstream 3182 15260137 ~ 15394108 (-)
G1423025 NA non-coding downstream 40855 15354532 ~ 15356435 (-)
G1423021 NA non-coding downstream 59097 15337648 ~ 15338193 (-)
LOC118940092 LOC106564328 non-coding downstream 61685 15288411 ~ 15438405 (-)
G1422959 NA non-coding downstream 66327 15077887 ~ 15330963 (-)
G1423053 NA non-coding upstream 58228 15471825 ~ 15472041 (-)
G1423060 LOC105021375 non-coding upstream 69545 15483142 ~ 15483477 (-)
G1423068 NA non-coding upstream 80252 15493849 ~ 15494288 (-)
G1423067 NA non-coding upstream 81463 15495060 ~ 15495865 (-)
G1423069 NA non-coding upstream 84084 15497681 ~ 15497991 (-)
G1422891 LOC106601621 other downstream 44200 14907317 ~ 15353090 (-)
G1422897 NA other downstream 62399 15333878 ~ 15334891 (-)
LOC118940320 LOC106605908 other downstream 149948 15003526 ~ 15247342 (-)
G1422796 NA other downstream 628652 14765531 ~ 14768638 (-)
G1422757 NA other downstream 804696 14591466 ~ 14592594 (-)
G1423112 NA other upstream 170098 15583695 ~ 15584093 (-)
G1423836 NA other upstream 395089 15808686 ~ 15831010 (-)
G1423891 NA other upstream 571676 15985273 ~ 15986842 (-)
G1424040 NA other upstream 956160 16369757 ~ 16370443 (-)
G1424051 cbx6 other upstream 993134 16406731 ~ 16410128 (-)

Expression


Co-expression Network