Gene
RNA
| Item | Value |
|---|---|
| gene id | G1423107 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 15576376 ~ 15577017 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: slit homolog 1 protein-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1629089 | True | 290 | lncRNA | 0.43 | 2 | 15576376 | 15577017 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936458 | LOC106591490 | coding | downstream | 108120 | 15444480 ~ 15468256 (-) |
| LOC118940092 | LOC106564328 | coding | downstream | 137971 | 15288411 ~ 15438405 (-) |
| LOC118940327 | NA | coding | downstream | 201259 | 15373361 ~ 15375117 (-) |
| LOC118940323 | LOC106601626 | coding | downstream | 229091 | 15317751 ~ 15347285 (-) |
| LOC118940326 | LOC106591409 | coding | downstream | 397129 | 15176941 ~ 15179247 (-) |
| LOC118940331 | NA | coding | upstream | 37847 | 15614864 ~ 15626817 (-) |
| LOC110485613 | LOC106591333 | coding | upstream | 50531 | 15627128 ~ 15704265 (-) |
| LOC110487262 | hoga1 | coding | upstream | 167198 | 15744215 ~ 15760194 (-) |
| LOC110485609 | LOC106591329 | coding | upstream | 200670 | 15777687 ~ 15797879 (-) |
| LOC110487244 | LOC105012087 | coding | upstream | 273657 | 15850674 ~ 15871731 (-) |
| G1423105 | NA | non-coding | downstream | 6508 | 15568578 ~ 15569868 (-) |
| G1423103 | NA | non-coding | downstream | 8625 | 15567463 ~ 15567751 (-) |
| G1423098 | NA | non-coding | downstream | 19462 | 15556367 ~ 15556914 (-) |
| G1423097 | NA | non-coding | downstream | 24507 | 15551551 ~ 15551869 (-) |
| G1423096 | NA | non-coding | downstream | 26109 | 15550020 ~ 15550267 (-) |
| G1423155 | NA | non-coding | upstream | 62801 | 15639818 ~ 15640559 (-) |
| G1423768 | NA | non-coding | upstream | 67413 | 15644430 ~ 15645067 (-) |
| G1423786 | NA | non-coding | upstream | 117122 | 15694139 ~ 15694552 (-) |
| G1422920 | LOC106591235 | other | downstream | 162779 | 15397290 ~ 15413597 (-) |
| G1422918 | NA | other | downstream | 171202 | 15383119 ~ 15405174 (-) |
| G1422891 | LOC106601621 | other | downstream | 223286 | 14907317 ~ 15353090 (-) |
| G1423112 | NA | other | upstream | 6678 | 15583695 ~ 15584093 (-) |
| G1423836 | NA | other | upstream | 231669 | 15808686 ~ 15831010 (-) |
| G1423891 | NA | other | upstream | 408256 | 15985273 ~ 15986842 (-) |
| G1424040 | NA | other | upstream | 792740 | 16369757 ~ 16370443 (-) |
| G1424051 | cbx6 | other | upstream | 829714 | 16406731 ~ 16410128 (-) |
