G1423891


Basic Information

Item Value
gene id G1423891
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 15985273 ~ 15986842 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1630061
CCATCAATTATCAATCTACATCATTATAATGTCAAGGACTGAGAATTCAACTCCAGCATTTACATAATTACTAATGGTCTGGCAAACCTACTTGTCATGCCTGCTCCCGTTCCCCCTCCCTGGctgcccatcattacacacagctgtcaccatcattacgcgcatcagcgcttcattgggctcacctggactccatcactttatTGATTGCCTCCCTTAAATCTGTCTATTCCTCAGTTTGATGACCGTGTCtgcattgatgttgttttgtttccCTTGTCCAGACATTGTctgtgttttgtttcatgtctgctatttattaaatgttcactccctgtactttctTCTCATCTCTCGGTGTCGGTCCTCACACTTCTAGATTTGACAGCAGGATAATAGAGATGTAAGGCCTTTCTTTGGTTTAGTGCCGAAGATGTAcagtccaggttctgtggtggctctcttcagtccagGttttgtggtggttctcttcaattcaggttctgtggtggttctcttcagtccaggttctgtggtggttctcttcagtccagggtcCATGGTAGTTCTCTTACGTTCTCATAATCGGAGGGCTCAGCATCTATCTGAGGGGATGTGTCACTGGGAGAGTCTCACATTTGCCAGGGTGTCATACTCTGGTGACCTGGTCTTCATGTTCAGAGTTGTGTATGTGTCACTGTTGAGGTCACTGGTAGGGTCAGCATGGacactTGCCAGAGTGTCATAGTCAGGGGACATGGTCCTCATGTTCAGAGCTGTGTACGTGTCACTGTTACAGTCAGGGCGGAcactCTGTGTGTCTGCTGTGTCATCACTTCCT

Function

NR:

description
B-cell receptor CD22-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1630061 True 841 TUCP 0.47 5 15985273 15986842

Neighbor

gene id symbol gene type direction distance location
LOC110485584 va0e2 coding downstream 46721 15936074 ~ 15938556 (-)
LOC110518551 LOC106591223 coding downstream 67750 15898886 ~ 15917523 (-)
LOC110487244 LOC105012087 coding downstream 113542 15850674 ~ 15871731 (-)
LOC110485609 LOC106591329 coding downstream 187394 15777687 ~ 15797879 (-)
LOC110487262 hoga1 coding downstream 225079 15744215 ~ 15760194 (-)
LOC118940334 p40phox coding upstream 294555 16281397 ~ 16330030 (-)
LOC110515368 LOC105012189 coding upstream 372504 16359346 ~ 16373440 (-)
LOC110512844 pla2g6 coding upstream 386883 16373725 ~ 16400027 (-)
LOC110512923 LOC106590932 coding upstream 485075 16471917 ~ 16544688 (-)
LOC118940336 LOC106590989 coding upstream 505947 16492789 ~ 16523216 (-)
G1423819 NA non-coding downstream 10740 15974270 ~ 15974533 (-)
G1423881 NA non-coding downstream 21305 15963704 ~ 15963968 (-)
G1423880 NA non-coding downstream 27595 15957457 ~ 15957678 (-)
G1423879 NA non-coding downstream 28817 15955987 ~ 15956456 (-)
G1423877 NA non-coding downstream 31883 15953118 ~ 15953390 (-)
G1423886 LOC106598988 non-coding upstream 21106 16007948 ~ 16085935 (-)
G1423897 LOC106601625 non-coding upstream 21473 16008315 ~ 16008959 (-)
G1423898 LOC106605911 non-coding upstream 23072 16009914 ~ 16089071 (-)
G1423888 NA non-coding upstream 49436 16036278 ~ 16103168 (-)
G1423928 NA non-coding upstream 91487 16078329 ~ 16078867 (-)
G1423836 NA other downstream 154263 15808686 ~ 15831010 (-)
G1423112 NA other downstream 401180 15583695 ~ 15584093 (-)
G1422920 LOC106591235 other downstream 571676 15397290 ~ 15413597 (-)
G1422918 NA other downstream 580099 15383119 ~ 15405174 (-)
G1422897 NA other downstream 650382 15333878 ~ 15334891 (-)
G1424040 NA other upstream 382915 16369757 ~ 16370443 (-)
G1424051 cbx6 other upstream 419889 16406731 ~ 16410128 (-)
G1424038 LOC106591467 other upstream 425216 16412058 ~ 16418005 (-)
LOC110508387 LOC106599573 other upstream 668426 16564951 ~ 16674565 (-)
G1424234 NA other upstream 783595 16770437 ~ 16772957 (-)

Expression


Co-expression Network