Gene
RNA
| Item | Value |
|---|---|
| gene id | G1423886 |
| gene name | LOC106598988 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 16007948 ~ 16085935 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| B-cell receptor CD22-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1630050 | True | 315 | lncRNA | 0.46 | 2 | 16007948 | 16085935 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485584 | va0e2 | coding | downstream | 69396 | 15936074 ~ 15938556 (-) |
| LOC110518551 | LOC106591223 | coding | downstream | 90425 | 15898886 ~ 15917523 (-) |
| LOC110487244 | LOC105012087 | coding | downstream | 136217 | 15850674 ~ 15871731 (-) |
| LOC110485609 | LOC106591329 | coding | downstream | 210069 | 15777687 ~ 15797879 (-) |
| LOC110487262 | hoga1 | coding | downstream | 247754 | 15744215 ~ 15760194 (-) |
| LOC118940334 | p40phox | coding | upstream | 195462 | 16281397 ~ 16330030 (-) |
| LOC110515368 | LOC105012189 | coding | upstream | 273411 | 16359346 ~ 16373440 (-) |
| LOC110512844 | pla2g6 | coding | upstream | 287790 | 16373725 ~ 16400027 (-) |
| LOC110512923 | LOC106590932 | coding | upstream | 385982 | 16471917 ~ 16544688 (-) |
| LOC118940336 | LOC106590989 | coding | upstream | 406854 | 16492789 ~ 16523216 (-) |
| G1423819 | NA | non-coding | downstream | 33415 | 15974270 ~ 15974533 (-) |
| G1423881 | NA | non-coding | downstream | 43980 | 15963704 ~ 15963968 (-) |
| G1423880 | NA | non-coding | downstream | 50270 | 15957457 ~ 15957678 (-) |
| G1423879 | NA | non-coding | downstream | 51492 | 15955987 ~ 15956456 (-) |
| G1423877 | NA | non-coding | downstream | 54558 | 15953118 ~ 15953390 (-) |
| G1423933 | LOC106591407 | non-coding | upstream | 14402 | 16100337 ~ 16102815 (-) |
| G1423889 | NA | non-coding | upstream | 18372 | 16104307 ~ 16117548 (-) |
| G1423958 | NA | non-coding | upstream | 70162 | 16156097 ~ 16156299 (-) |
| G1423962 | NA | non-coding | upstream | 76422 | 16162357 ~ 16162659 (-) |
| G1423964 | NA | non-coding | upstream | 79722 | 16165657 ~ 16166274 (-) |
| G1423891 | NA | other | downstream | 21106 | 15985273 ~ 15986842 (-) |
| G1423836 | NA | other | downstream | 176938 | 15808686 ~ 15831010 (-) |
| G1423112 | NA | other | downstream | 423855 | 15583695 ~ 15584093 (-) |
| G1422920 | LOC106591235 | other | downstream | 594351 | 15397290 ~ 15413597 (-) |
| G1422918 | NA | other | downstream | 602774 | 15383119 ~ 15405174 (-) |
| G1424040 | NA | other | upstream | 283822 | 16369757 ~ 16370443 (-) |
| G1424051 | cbx6 | other | upstream | 320796 | 16406731 ~ 16410128 (-) |
| G1424038 | LOC106591467 | other | upstream | 326123 | 16412058 ~ 16418005 (-) |
| LOC110508387 | LOC106599573 | other | upstream | 569333 | 16564951 ~ 16674565 (-) |
| G1424234 | NA | other | upstream | 684502 | 16770437 ~ 16772957 (-) |
