Gene
RNA
| Item | Value |
|---|---|
| gene id | G1423410 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 16339010 ~ 16339993 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1629471 | False | 617 | lncRNA | 0.35 | 3 | 16339010 | 16339993 |
| TU1629475 | True | 390 | lncRNA | 0.35 | 2 | 16339423 | 16339993 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940333 | LOC106591430 | coding | upstream | 100965 | 16215512 ~ 16238045 (+) |
| LOC110485588 | LOC106592141 | coding | upstream | 176154 | 16152471 ~ 16162856 (+) |
| LOC118940330 | NA | coding | upstream | 207467 | 16127111 ~ 16131543 (+) |
| LOC110485586 | LOC106598058 | coding | upstream | 231956 | 16098302 ~ 16107054 (+) |
| LOC110485585 | LOC106605908 | coding | upstream | 251397 | 16079394 ~ 16087613 (+) |
| LOC110519827 | LOC106591467 | coding | downstream | 63402 | 16403395 ~ 16422212 (+) |
| LOC118940335 | LOC108261343 | coding | downstream | 87984 | 16427977 ~ 16431459 (+) |
| LOC118940082 | NA | coding | downstream | 106267 | 16446195 ~ 16446953 (+) |
| LOC118940339 | LOC106591397 | coding | downstream | 107560 | 16447553 ~ 16461892 (+) |
| LOC110494907 | LOC106564399 | coding | downstream | 251318 | 16591311 ~ 16596106 (+) |
| G1423384 | NA | non-coding | upstream | 5448 | 16285699 ~ 16333562 (+) |
| G1423399 | NA | non-coding | upstream | 9424 | 16316791 ~ 16329586 (+) |
| G1423383 | p40phox | non-coding | upstream | 54600 | 16281226 ~ 16284410 (+) |
| G1423389 | NA | non-coding | upstream | 58517 | 16279947 ~ 16280493 (+) |
| G1423387 | NA | non-coding | upstream | 70889 | 16267919 ~ 16268121 (+) |
| G1423411 | NA | non-coding | downstream | 1920 | 16341913 ~ 16342213 (+) |
| G1423415 | NA | non-coding | downstream | 23787 | 16363780 ~ 16364078 (+) |
| G1423416 | NA | non-coding | downstream | 25479 | 16365472 ~ 16365822 (+) |
| G1423418 | NA | non-coding | downstream | 31998 | 16371991 ~ 16372234 (+) |
| G1423427 | NA | non-coding | downstream | 47385 | 16387378 ~ 16391618 (+) |
| G1423362 | NA | other | upstream | 131817 | 16204539 ~ 16207193 (+) |
| LOC110487248 | LOC106598058 | other | upstream | 330266 | 15982653 ~ 16010330 (+) |
| LOC110487250 | LOC106564362 | other | upstream | 364861 | 15947058 ~ 15974559 (+) |
| LOC118936553 | LOC106591159 | other | upstream | 612725 | 15705543 ~ 15728989 (+) |
| G1422638 | LOC106601621 | other | upstream | 923613 | 15399216 ~ 15415397 (+) |
| G1423508 | NA | other | downstream | 205032 | 16545025 ~ 16673580 (+) |
| LOC110493426 | cacng2 | other | downstream | 659992 | 16998320 ~ 17084086 (+) |
| LOC110494929 | LOC106564430 | other | downstream | 776548 | 17116311 ~ 17132488 (+) |
| G1424384 | NA | other | downstream | 843488 | 17183481 ~ 17184723 (+) |
